Jatropha Genome Database

JcCB0365551.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0365551.10 - phase: 0 
         (161 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g03120.1                                                       211   3e-55
Glyma07g37530.1                                                       211   4e-55

>Glyma17g03120.1 
          Length = 224

 Score =  211 bits (537), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 100/130 (76%), Positives = 116/130 (89%)

Query: 4   ASLGVQKLLQVGTKIIAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLENGGTIEIPHPL 63
           A+ G QKLL++ TKI+AVGRNYAAHAKELGNAVPKEPVLFLKPTSSYL NGGTI+IPH  
Sbjct: 2   AAAGCQKLLELSTKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLSNGGTIQIPHNE 61

Query: 64  ESLDHEVELAVVIGQKGRDVPQTIAMDYVGGYALGLDMTAREIQSSAKSAGLPWTVAKGQ 123
            SL HEVELAVVI +K RDV ++ AMDYV GYAL LDMTAR++Q++AKSAGLPW++AKGQ
Sbjct: 62  GSLHHEVELAVVISKKARDVSESSAMDYVAGYALALDMTARDLQAAAKSAGLPWSLAKGQ 121

Query: 124 DTFTPISSVV 133
           DTFTPISS++
Sbjct: 122 DTFTPISSIL 131


>Glyma07g37530.1 
          Length = 224

 Score =  211 bits (536), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 102/133 (76%), Positives = 118/133 (88%), Gaps = 2/133 (1%)

Query: 1   MATASLGVQKLLQVGTKIIAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLENGGTIEIP 60
           MA A  G QKLL++ TKI+AVGRNYAAHAKELGNAVPKEPVLFLKPTSSYL+NGGTI+IP
Sbjct: 1   MAVA--GCQKLLELSTKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLKNGGTIQIP 58

Query: 61  HPLESLDHEVELAVVIGQKGRDVPQTIAMDYVGGYALGLDMTAREIQSSAKSAGLPWTVA 120
           H   SL HEVELAVVI +K RDV ++ AMDYV GYAL LDMTAR++Q++AKSAGLPW++A
Sbjct: 59  HNEGSLHHEVELAVVIAKKARDVSESSAMDYVAGYALALDMTARDLQAAAKSAGLPWSLA 118

Query: 121 KGQDTFTPISSVV 133
           KGQDTFTPISS++
Sbjct: 119 KGQDTFTPISSIL 131