Jatropha Genome Database

JcCB0364041.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0364041.10 + phase: 0 /partial
         (155 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g23580.1                                                       202   2e-52
Glyma10g43250.1                                                       197   4e-51
Glyma01g37860.1                                                       127   5e-30
Glyma11g07480.1                                                       119   2e-27

>Glyma20g23580.1 
          Length = 438

 Score =  202 bits (513), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 98/155 (63%), Positives = 119/155 (76%), Gaps = 2/155 (1%)

Query: 1   VWASGFSAAFLKKNSVAT--RVHMSSSDVEVFVGGKKFVEPKPAATEAALLVILEKFFEV 58
           VWASGFSAAFLKKNSVAT  RV    S ++V +G +  +  KPA TEAALL+IL+KFFE+
Sbjct: 282 VWASGFSAAFLKKNSVATKGRVFSDQSGIKVSIGSEDDLGLKPALTEAALLLILKKFFEI 341

Query: 59  VLNFPXXXXXXXXXXXXXXXXQPTCPQLYIYSTADRVIPAKSVESFIQEQRRAGHEVRAC 118
           +L+ P                QP+CPQLY+YS+ADRVIPA SVESF++ QRRAGH+VRAC
Sbjct: 342 ILDLPSVNRRLSDVMSMLSSKQPSCPQLYMYSSADRVIPADSVESFVEAQRRAGHDVRAC 401

Query: 119 NFVSSPHVDHFRNDPNLYSTQLSQFLDDYVLACCK 153
           NFVSSPHVDHFRNDP LY++QLSQFL++ VL+ CK
Sbjct: 402 NFVSSPHVDHFRNDPRLYTSQLSQFLEECVLSRCK 436


>Glyma10g43250.1 
          Length = 435

 Score =  197 bits (501), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 97/155 (62%), Positives = 119/155 (76%), Gaps = 4/155 (2%)

Query: 1   VWASGFSAAFLKKNSVAT--RVHMSSSDVEVFVGGKKFVEPKPAATEAALLVILEKFFEV 58
           VWASGFSAAFLKKNSVAT  RV    S ++V +G + +   KPA TEAALL+IL+KFFE+
Sbjct: 281 VWASGFSAAFLKKNSVATKGRVFSDESGIKVSIGSEDWR--KPALTEAALLLILKKFFEI 338

Query: 59  VLNFPXXXXXXXXXXXXXXXXQPTCPQLYIYSTADRVIPAKSVESFIQEQRRAGHEVRAC 118
           +L+ P                QP+CPQLY+YS+ADRVIPA SVESF++ QRRAGH+VRAC
Sbjct: 339 ILDLPSVNRRLSDVMSMLSSRQPSCPQLYMYSSADRVIPADSVESFVEAQRRAGHDVRAC 398

Query: 119 NFVSSPHVDHFRNDPNLYSTQLSQFLDDYVLACCK 153
           NFVSSPHVDHFRNDP LY++QLSQFL++ V++ CK
Sbjct: 399 NFVSSPHVDHFRNDPKLYTSQLSQFLEECVVSRCK 433


>Glyma01g37860.1 
          Length = 377

 Score =  127 bits (319), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 68/148 (45%), Positives = 91/148 (61%), Gaps = 3/148 (2%)

Query: 1   VWASGFSAAFLKK-NSVATRVHMSSS-DVEVFVGGKKFVEPKPAATEAALLVILEKFFEV 58
           VWA+GFSAA LKK NS+   V +      E  V   K  + +P+  E  +L +LEKFF  
Sbjct: 219 VWAAGFSAAILKKRNSLGPVVEVEGKLKSETEVSLSKVQQNEPSTIETVVLSLLEKFFSF 278

Query: 59  VLNFPXXXXXXXXXXXXXXXXQPTCPQLYIYSTADRVIPAKSVESFIQEQRRAGHEVRAC 118
           VL  P                QP CPQLY+YSTAD+V+P +S+E+ I+EQR+ G  VR+ 
Sbjct: 279 VLQLPDVNQRLTRIVNVLMKHQP-CPQLYLYSTADKVVPCQSIETLIEEQRKMGKRVRSF 337

Query: 119 NFVSSPHVDHFRNDPNLYSTQLSQFLDD 146
           NF  SPHVDH+R  P+LY +QLS+FL++
Sbjct: 338 NFGLSPHVDHYRTFPDLYLSQLSEFLNE 365


>Glyma11g07480.1 
          Length = 387

 Score =  119 bits (297), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/147 (44%), Positives = 88/147 (59%), Gaps = 3/147 (2%)

Query: 1   VWASGFSAAFLKKN-SVATRVHMSSS-DVEVFVGGKKFVEPKPAATEAALLVILEKFFEV 58
           VWA+GFSAA LKK  S+   V +      E  V   K  + + +  E  +L +LEKFF  
Sbjct: 229 VWAAGFSAAILKKRISLGPIVEVEGKLKSETEVSLPKIEQKESSTIETLVLSLLEKFFSF 288

Query: 59  VLNFPXXXXXXXXXXXXXXXXQPTCPQLYIYSTADRVIPAKSVESFIQEQRRAGHEVRAC 118
           VL  P                QP CPQLY+YSTAD+V+P +S+E+ I+EQR+ G  VR+ 
Sbjct: 289 VLQLPDVNQRLTRIVNVLMKHQP-CPQLYLYSTADKVVPYQSIETLIEEQRKMGKRVRSF 347

Query: 119 NFVSSPHVDHFRNDPNLYSTQLSQFLD 145
           NF  SPHVDH+R  P+LY +Q+S+FL+
Sbjct: 348 NFGLSPHVDHYRTFPDLYLSQVSEFLN 374