Jatropha Genome Database

JcCB0361141.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0361141.10 + phase: 0 /partial
         (284 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g06990.1                                                       117   2e-26
Glyma13g00900.1                                                       112   4e-25
Glyma08g23040.1                                                        74   3e-13

>Glyma17g06990.1 
          Length = 182

 Score =  117 bits (293), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/95 (65%), Positives = 65/95 (68%), Gaps = 6/95 (6%)

Query: 190 AVSDFVDGIAREQLEKXXXXXXXXXXXXXXXXXXXXXXXXMMKKFGIPIGFDSTKGKPVP 249
           AVSDFVDGI +EQ +K                        +MK FGIP GFDSTKGKPVP
Sbjct: 94  AVSDFVDGIVKEQQQKENGDGGEGEAEGSEDELE------IMKMFGIPTGFDSTKGKPVP 147

Query: 250 GADVSGVRVVTKRQPRQYMNRRGGFNRPLPPERNR 284
           GADVSGVR VTKRQPRQYMNRRGGFNRPLP ERNR
Sbjct: 148 GADVSGVRAVTKRQPRQYMNRRGGFNRPLPAERNR 182


>Glyma13g00900.1 
          Length = 184

 Score =  112 bits (281), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 61/95 (64%), Positives = 63/95 (66%), Gaps = 4/95 (4%)

Query: 190 AVSDFVDGIAREQLEKXXXXXXXXXXXXXXXXXXXXXXXXMMKKFGIPIGFDSTKGKPVP 249
           AVSDFVDGI +EQ                           MMK FGIP GFDSTKGKPVP
Sbjct: 94  AVSDFVDGIVKEQQ----QKQQKDNGDGGGEAEGNEDELEMMKMFGIPTGFDSTKGKPVP 149

Query: 250 GADVSGVRVVTKRQPRQYMNRRGGFNRPLPPERNR 284
           GADVSGVR VTKRQPRQYMNRRGGFNRPLP E+NR
Sbjct: 150 GADVSGVRAVTKRQPRQYMNRRGGFNRPLPAEKNR 184


>Glyma08g23040.1 
          Length = 153

 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/54 (68%), Positives = 39/54 (72%)

Query: 230 MMKKFGIPIGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPPERN 283
           MMK FGIP  FDSTKGK VP ADV+ V  +TKRQ  QYMNR   FNRPL  ERN
Sbjct: 83  MMKMFGIPTIFDSTKGKLVPSADVNDVSAITKRQLCQYMNRHDEFNRPLLLERN 136