Jatropha Genome Database

JcCB0360521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0360521.10 - phase: 0 /partial
         (380 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g36570.1                                                       537   e-153

>Glyma03g36570.1 
          Length = 1126

 Score =  537 bits (1384), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 264/365 (72%), Positives = 292/365 (80%)

Query: 5   QACGAKFHIKXXXXXXXXXXXXXXXXXXXARKGEVEDYQSTKRKEFKNFKENLVSFWDIL 64
           +ACGAK+  K                   A++GEVEDYQ++K+KE KNFKENL SFWD L
Sbjct: 116 EACGAKYCDKSDLVDETDVDEVVIALVNCAKRGEVEDYQNSKKKEIKNFKENLESFWDNL 175

Query: 65  VVECQNGPLFDKVLFDKCMDYIIALSCTPPRVYRQIASLMGLQLVKSFISVAKTLGAQRE 124
           V ECQ+GPLFD+VLFDKCMDYIIALSCTPPRVYRQ+ASLMGL LV S+I++A  L AQRE
Sbjct: 176 VRECQHGPLFDQVLFDKCMDYIIALSCTPPRVYRQVASLMGLSLVTSYITIANMLRAQRE 235

Query: 125 TTQRQLNAEKKKRTEGPRLESLNKRLSVTHEKIVVLEDMMRKIFTGLFVHRYRDIDPNIR 184
           TTQRQL AEKKKRTEGPR++SL KR S TH++I +LE+MMRKIFTGLFVHRYRDID NIR
Sbjct: 236 TTQRQLEAEKKKRTEGPRVDSLKKRSSDTHDRIQLLEEMMRKIFTGLFVHRYRDIDQNIR 295

Query: 185 MSCIESLGVWILSYPSLFLQDLYLKYLGWTLNDKSAGVRKASILALQNLYDMDDNVPTLG 244
           MSCIESLG WILSYPSLFLQDLYLKYLGWTLNDK+AGVRKASI ALQNLY++DDNVPTLG
Sbjct: 296 MSCIESLGAWILSYPSLFLQDLYLKYLGWTLNDKNAGVRKASISALQNLYEVDDNVPTLG 355

Query: 245 LFTERFSNRMIELADDIDVSVAVSAIGLVKQLLRHQXXXXXXXXXXXXXXXXXXADIRRA 304
           LFTERFS+RMIELADDIDVSVAV AIGLVKQLLRHQ                   +IR A
Sbjct: 356 LFTERFSSRMIELADDIDVSVAVQAIGLVKQLLRHQLIPEDDLGPLYDLLIDDPPEIRHA 415

Query: 305 IGELVYDHLIAQKFNGSQSGTRGNDNGSSVVHLSRMLQILREFSTDPILSIYVIDDVWEY 364
           IG LVYDHLIAQKFN  QSG+R     +S VHL RML+IL EF  DPILSIYVIDDVWEY
Sbjct: 416 IGALVYDHLIAQKFNSLQSGSRDETGNTSEVHLKRMLRILEEFPQDPILSIYVIDDVWEY 475

Query: 365 MKAMK 369
           M A+K
Sbjct: 476 MTAIK 480