Jatropha Genome Database

JcCB0356581.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0356581.10 - phase: 1 /partial
         (130 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g18940.1                                                       207   2e-54
Glyma04g18940.2                                                       207   2e-54
Glyma06g24820.1                                                       199   4e-52
Glyma06g24820.2                                                       150   4e-37
Glyma14g08010.1                                                       101   2e-22
Glyma04g16360.1                                                        81   3e-16
Glyma06g46600.1                                                        80   6e-16
Glyma02g08600.2                                                        78   3e-15
Glyma02g08600.1                                                        78   3e-15
Glyma20g31030.1                                                        77   5e-15
Glyma10g36570.1                                                        75   1e-14

>Glyma04g18940.1 
          Length = 378

 Score =  207 bits (528), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 95/129 (73%), Positives = 112/129 (86%)

Query: 1   KLYFIDFEYGSYSYRGYDIANHFNEYAGYDCDYSLYPSKDEQYHFFRHYLQPDKPHEVSD 60
           KLYFID+EY SY+YRGYDI NHF EYAG++CDY LYP+ +EQYHF RHYL+P++P EVS+
Sbjct: 249 KLYFIDYEYASYNYRGYDIGNHFAEYAGFECDYDLYPNMNEQYHFLRHYLKPERPQEVSE 308

Query: 61  RDLEALYIEANTFMLASHFFWALWALIQAKMSPIDFDYLGYFFLRYNEYKKQKEMSSSLA 120
           +DLE LY+EANTF LASH FWALW LIQAKMSPI+FDYLGYFFLRY+EYK+QKE    LA
Sbjct: 309 KDLETLYVEANTFSLASHVFWALWGLIQAKMSPIEFDYLGYFFLRYHEYKRQKEKYFLLA 368

Query: 121 LSYLSRCES 129
            SYLS C++
Sbjct: 369 RSYLSGCKN 377


>Glyma04g18940.2 
          Length = 327

 Score =  207 bits (528), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 95/129 (73%), Positives = 112/129 (86%)

Query: 1   KLYFIDFEYGSYSYRGYDIANHFNEYAGYDCDYSLYPSKDEQYHFFRHYLQPDKPHEVSD 60
           KLYFID+EY SY+YRGYDI NHF EYAG++CDY LYP+ +EQYHF RHYL+P++P EVS+
Sbjct: 198 KLYFIDYEYASYNYRGYDIGNHFAEYAGFECDYDLYPNMNEQYHFLRHYLKPERPQEVSE 257

Query: 61  RDLEALYIEANTFMLASHFFWALWALIQAKMSPIDFDYLGYFFLRYNEYKKQKEMSSSLA 120
           +DLE LY+EANTF LASH FWALW LIQAKMSPI+FDYLGYFFLRY+EYK+QKE    LA
Sbjct: 258 KDLETLYVEANTFSLASHVFWALWGLIQAKMSPIEFDYLGYFFLRYHEYKRQKEKYFLLA 317

Query: 121 LSYLSRCES 129
            SYLS C++
Sbjct: 318 RSYLSGCKN 326


>Glyma06g24820.1 
          Length = 381

 Score =  199 bits (507), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 92/129 (71%), Positives = 110/129 (85%)

Query: 1   KLYFIDFEYGSYSYRGYDIANHFNEYAGYDCDYSLYPSKDEQYHFFRHYLQPDKPHEVSD 60
           KLYFID+EY SY+YRGYDI +HF EYAG++CDY LYP+ +EQYHF RHYL+P++P EVS+
Sbjct: 249 KLYFIDYEYASYNYRGYDIGDHFAEYAGFECDYDLYPNMNEQYHFLRHYLKPERPQEVSE 308

Query: 61  RDLEALYIEANTFMLASHFFWALWALIQAKMSPIDFDYLGYFFLRYNEYKKQKEMSSSLA 120
           +DLE LY+EANTF LASH FWALW LIQAKMS I+FDYLGYFFLRY+EYK+ KE    LA
Sbjct: 309 KDLETLYVEANTFSLASHIFWALWGLIQAKMSAIEFDYLGYFFLRYHEYKRHKEKYFLLA 368

Query: 121 LSYLSRCES 129
            SYLS C++
Sbjct: 369 QSYLSGCKN 377


>Glyma06g24820.2 
          Length = 363

 Score =  150 bits (378), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 64/89 (71%), Positives = 77/89 (86%)

Query: 1   KLYFIDFEYGSYSYRGYDIANHFNEYAGYDCDYSLYPSKDEQYHFFRHYLQPDKPHEVSD 60
           KLYFID+EY SY+YRGYDI +HF EYAG++CDY LYP+ +EQYHF RHYL+P++P EVS+
Sbjct: 249 KLYFIDYEYASYNYRGYDIGDHFAEYAGFECDYDLYPNMNEQYHFLRHYLKPERPQEVSE 308

Query: 61  RDLEALYIEANTFMLASHFFWALWALIQA 89
           +DLE LY+EANTF LASH FWALW LIQ 
Sbjct: 309 KDLETLYVEANTFSLASHIFWALWGLIQV 337


>Glyma14g08010.1 
          Length = 147

 Score =  101 bits (251), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 49/72 (68%), Positives = 57/72 (79%)

Query: 58  VSDRDLEALYIEANTFMLASHFFWALWALIQAKMSPIDFDYLGYFFLRYNEYKKQKEMSS 117
           V ++DLE LY+EAN F L SH FWALW LIQAKMS I+FDYLGYFFLRY+EYK+ KE   
Sbjct: 75  VFEKDLETLYVEANIFSLVSHIFWALWGLIQAKMSAIEFDYLGYFFLRYHEYKRHKEKYF 134

Query: 118 SLALSYLSRCES 129
            LA SYLS C++
Sbjct: 135 LLAQSYLSGCKN 146


>Glyma04g16360.1 
          Length = 396

 Score = 81.3 bits (199), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 66/119 (55%), Gaps = 8/119 (6%)

Query: 2   LYFIDFEYGSYSYRGYDIANHFNEYAG-------YDCDYSLYPSKDEQYHFFRHYLQPDK 54
           +  ID+EY SY+   +DIANHF E A        +  DY+ YP  +E+  F + YL    
Sbjct: 227 VTIIDYEYASYNPVAFDIANHFCEMAANYHTEEPHILDYNKYPDFEERQRFVQAYLSTSG 286

Query: 55  PHEVSDRDLEALYIEANTFMLASHFFWALWALIQAKMSPIDFDYLGYFFLRYNEYKKQK 113
             + SD ++E L  E   + LA+H FW +W +I A+++ IDFDY  Y   R+ EY  +K
Sbjct: 287 -EQPSDSEVEQLLQEIEKYTLANHLFWGVWGIISAQVNTIDFDYKEYAKQRFQEYWARK 344


>Glyma06g46600.1 
          Length = 343

 Score = 80.1 bits (196), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 67/119 (56%), Gaps = 8/119 (6%)

Query: 2   LYFIDFEYGSYSYRGYDIANHFNEYAG-------YDCDYSLYPSKDEQYHFFRHYLQPDK 54
           +  ID+EY SY+   +DIANHF E A        +  DY+ YP  +E+  F + YL    
Sbjct: 174 VTIIDYEYASYNPVAFDIANHFCEMAANYHTEEPHILDYNKYPDFEERQRFVQAYLSTSG 233

Query: 55  PHEVSDRDLEALYIEANTFMLASHFFWALWALIQAKMSPIDFDYLGYFFLRYNEYKKQK 113
             ++S+ ++E L  E   + LA+H FW +W +I A+++ IDFDY  Y   R+ EY  +K
Sbjct: 234 -EQLSNSEVEQLLQEIEKYTLANHLFWGVWGIISAQVNTIDFDYKEYAKQRFQEYWARK 291


>Glyma02g08600.2 
          Length = 359

 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 45/117 (38%), Positives = 65/117 (55%), Gaps = 12/117 (10%)

Query: 2   LYFIDFEYGSYSYRGYDIANHFNEYAG-------YDCDYSLYPSKDEQYHFFRHYLQPD- 53
           +  ID+EY SY+  GYD+ANHF E          +  DYS YP  +E+  F  +YL  + 
Sbjct: 221 ITLIDYEYASYNPIGYDLANHFCEMVANYHSDEPHVLDYSKYPGLEERQRFVYNYLSSEG 280

Query: 54  -KPHEVSDRDLEALYIEANTFMLASHFFWALWALIQAKMSPIDFDYLGYFFLRYNEY 109
            KP   S+ +++ L   A  + LA+H FW LW LI + ++ IDFDY  Y   R+ +Y
Sbjct: 281 KKP---SNSEVDQLVNLAEKYTLANHLFWGLWGLISSHVNTIDFDYKEYARQRFQQY 334


>Glyma02g08600.1 
          Length = 359

 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 45/117 (38%), Positives = 65/117 (55%), Gaps = 12/117 (10%)

Query: 2   LYFIDFEYGSYSYRGYDIANHFNEYAG-------YDCDYSLYPSKDEQYHFFRHYLQPD- 53
           +  ID+EY SY+  GYD+ANHF E          +  DYS YP  +E+  F  +YL  + 
Sbjct: 221 ITLIDYEYASYNPIGYDLANHFCEMVANYHSDEPHVLDYSKYPGLEERQRFVYNYLSSEG 280

Query: 54  -KPHEVSDRDLEALYIEANTFMLASHFFWALWALIQAKMSPIDFDYLGYFFLRYNEY 109
            KP   S+ +++ L   A  + LA+H FW LW LI + ++ IDFDY  Y   R+ +Y
Sbjct: 281 KKP---SNSEVDQLVNLAEKYTLANHLFWGLWGLISSHVNTIDFDYKEYARQRFQQY 334


>Glyma20g31030.1 
          Length = 362

 Score = 77.0 bits (188), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/117 (37%), Positives = 64/117 (54%), Gaps = 12/117 (10%)

Query: 2   LYFIDFEYGSYSYRGYDIANHFNEYAG-------YDCDYSLYPSKDEQYHFFRHYL--QP 52
           +  ID+EY SY+   YD+ANHF E          +  DY+ YP  +E+  F R+YL  + 
Sbjct: 221 ITIIDYEYASYNPIAYDLANHFCEMVADYHSDTPHVLDYTKYPGLEERQRFIRNYLSSEG 280

Query: 53  DKPHEVSDRDLEALYIEANTFMLASHFFWALWALIQAKMSPIDFDYLGYFFLRYNEY 109
           +KP   S+  +  L   A  + LA+H FW LW LI + ++ IDFDY  Y   R+ +Y
Sbjct: 281 NKP---SNAKVNQLAKAAEKYTLANHLFWGLWGLISSYVNKIDFDYKEYARQRFQQY 334


>Glyma10g36570.1 
          Length = 362

 Score = 75.5 bits (184), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 12/117 (10%)

Query: 2   LYFIDFEYGSYSYRGYDIANHFNEYAG-------YDCDYSLYPSKDEQYHFFRHYL--QP 52
           +  ID+EY  Y+   YD+ANHF E          +  DY  YP  +E+  F R+YL  + 
Sbjct: 221 ITIIDYEYAGYNPIAYDLANHFCEMVADYHSDTPHVLDYKKYPGLEERQRFIRNYLSSEG 280

Query: 53  DKPHEVSDRDLEALYIEANTFMLASHFFWALWALIQAKMSPIDFDYLGYFFLRYNEY 109
           +KP   S+  +  L   A  + LA+H FW LW LI + ++ IDFDY  Y   R+ +Y
Sbjct: 281 NKP---SNAKVNQLVKAAEKYTLANHLFWGLWGLISSYVNKIDFDYKEYGRQRFQQY 334