Jatropha Genome Database

JcCB0356071.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0356071.10 + phase: 0 /partial
         (160 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g40460.1                                                       202   1e-52
Glyma18g45380.1                                                       199   1e-51
Glyma03g02530.1                                                       164   4e-41

>Glyma09g40460.1 
          Length = 363

 Score =  202 bits (515), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 100/148 (67%), Positives = 110/148 (74%)

Query: 11  LKESALQLPRSVSTNYYKRRNAKWSPPQAAIIPNFHLPMRSFEVKNRTSSEEIKSLRLIT 70
            + +A  +  S  TN    R++ W P QAA+ PNFHLPMRSFE+KNRTS E+IK+LRLIT
Sbjct: 9   FRGTAFPVCPSNVTNNRNSRSSYWRPAQAAVKPNFHLPMRSFELKNRTSPEDIKALRLIT 68

Query: 71  AIKTPYLPDGRFDLEAYDALVNMQIVDXXXXXXXXXXXXXXQLMSWDEHIMLIGHTVNCF 130
           AIKTPYLPDGRFDLEAYD LVNMQI                QLMSW+EHIMLI HTVNCF
Sbjct: 69  AIKTPYLPDGRFDLEAYDDLVNMQIGQGAEGIIVGGTTGEGQLMSWEEHIMLIAHTVNCF 128

Query: 131 GSSIKVIGNTGSNSTREAIHATVQGFAV 158
           G  IKVIGNTGSNSTREAIHAT QGFAV
Sbjct: 129 GGKIKVIGNTGSNSTREAIHATEQGFAV 156


>Glyma18g45380.1 
          Length = 363

 Score =  199 bits (505), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 100/150 (66%), Positives = 109/150 (72%)

Query: 9   VFLKESALQLPRSVSTNYYKRRNAKWSPPQAAIIPNFHLPMRSFEVKNRTSSEEIKSLRL 68
           V  + S   +  S  TN    R++ W P QAA+  NFHLPMRSFE+KNRTS E+IK+LRL
Sbjct: 7   VCFRGSTFPVCPSNFTNTRNTRSSCWRPTQAAVKSNFHLPMRSFELKNRTSPEDIKALRL 66

Query: 69  ITAIKTPYLPDGRFDLEAYDALVNMQIVDXXXXXXXXXXXXXXQLMSWDEHIMLIGHTVN 128
           ITAIKTPYLPDGRFDLEAYD LVNMQI                QLMSW+EHIMLI HTVN
Sbjct: 67  ITAIKTPYLPDGRFDLEAYDDLVNMQIGQGAEGVIVGGTTGEGQLMSWEEHIMLIAHTVN 126

Query: 129 CFGSSIKVIGNTGSNSTREAIHATVQGFAV 158
           CFG  IKVIGNTGSNSTREAIHAT QGFAV
Sbjct: 127 CFGGKIKVIGNTGSNSTREAIHATEQGFAV 156


>Glyma03g02530.1 
          Length = 365

 Score =  164 bits (415), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 83/150 (55%), Positives = 100/150 (66%), Gaps = 1/150 (0%)

Query: 9   VFLKESALQLPRSVSTNYYKRRNAKWSPPQAAIIPNFHLPMRSFEVKNRTSSEEIKSLRL 68
           +  +   L    S++T   KR N  W  PQAA+  +F LPM S  VKNRTS  +I+SLRL
Sbjct: 10  LLFRGPGLAFSHSIATTCNKR-NTCWKAPQAAVRNDFCLPMSSSAVKNRTSIGDIRSLRL 68

Query: 69  ITAIKTPYLPDGRFDLEAYDALVNMQIVDXXXXXXXXXXXXXXQLMSWDEHIMLIGHTVN 128
           ITA+KTPYLP+G+FDLEAYD LVNMQI +              QLM+WDE IMLI HTVN
Sbjct: 69  ITAVKTPYLPNGKFDLEAYDNLVNMQIANGVEGILVAGTTGEGQLMTWDEQIMLIAHTVN 128

Query: 129 CFGSSIKVIGNTGSNSTREAIHATVQGFAV 158
            FG+ +KV+GN GSN T EAI AT +GFAV
Sbjct: 129 SFGNKVKVVGNAGSNCTSEAIKATERGFAV 158