Jatropha Genome Database

JcCB0354791.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0354791.10 - phase: 1 /partial
         (102 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g17610.1                                                       189   8e-49
Glyma15g41540.1                                                       188   9e-49
Glyma15g41540.2                                                       188   1e-48
Glyma15g41550.1                                                       176   6e-45
Glyma08g17600.1                                                       174   2e-44

>Glyma08g17610.1 
          Length = 485

 Score =  189 bits (479), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 95/102 (93%), Positives = 100/102 (98%)

Query: 1   VKTFSEALETTKTVIWNGPMGVFEFDKFAVGTEAIAKKLAELSGKGVTTIIGGGDSVAAV 60
           VK+FSEAL+TT+T+IWNGPMGVFEFDKFAVGTEAIAKKLA+LSGKGVTTIIGGGDSVAAV
Sbjct: 384 VKSFSEALDTTQTIIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAV 443

Query: 61  EKVGVADVMSHISTGGGASLELLEGKELPGVLALDEATPVAV 102
           EKVGVA VMSHISTGGGASLELLEGKELPGVLALDEA PVAV
Sbjct: 444 EKVGVASVMSHISTGGGASLELLEGKELPGVLALDEAVPVAV 485


>Glyma15g41540.1 
          Length = 483

 Score =  188 bits (478), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 95/102 (93%), Positives = 100/102 (98%)

Query: 1   VKTFSEALETTKTVIWNGPMGVFEFDKFAVGTEAIAKKLAELSGKGVTTIIGGGDSVAAV 60
           VK+FSEAL+TT+T+IWNGPMGVFEFDKFAVGTEAIAKKLA+LSGKGVTTIIGGGDSVAAV
Sbjct: 382 VKSFSEALDTTQTIIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAV 441

Query: 61  EKVGVADVMSHISTGGGASLELLEGKELPGVLALDEATPVAV 102
           EKVGVA VMSHISTGGGASLELLEGKELPGVLALDEA PVAV
Sbjct: 442 EKVGVASVMSHISTGGGASLELLEGKELPGVLALDEAVPVAV 483


>Glyma15g41540.2 
          Length = 377

 Score =  188 bits (478), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 95/102 (93%), Positives = 100/102 (98%)

Query: 1   VKTFSEALETTKTVIWNGPMGVFEFDKFAVGTEAIAKKLAELSGKGVTTIIGGGDSVAAV 60
           VK+FSEAL+TT+T+IWNGPMGVFEFDKFAVGTEAIAKKLA+LSGKGVTTIIGGGDSVAAV
Sbjct: 276 VKSFSEALDTTQTIIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAV 335

Query: 61  EKVGVADVMSHISTGGGASLELLEGKELPGVLALDEATPVAV 102
           EKVGVA VMSHISTGGGASLELLEGKELPGVLALDEA PVAV
Sbjct: 336 EKVGVASVMSHISTGGGASLELLEGKELPGVLALDEAVPVAV 377


>Glyma15g41550.1 
          Length = 401

 Score =  176 bits (445), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 87/97 (89%), Positives = 94/97 (96%)

Query: 1   VKTFSEALETTKTVIWNGPMGVFEFDKFAVGTEAIAKKLAELSGKGVTTIIGGGDSVAAV 60
           +KTF EAL+TT+T+IWNGPMGVFEFDKFA GTEAIAKKLAELSGKGVTTIIGGGDSVAAV
Sbjct: 305 IKTFGEALDTTQTIIWNGPMGVFEFDKFATGTEAIAKKLAELSGKGVTTIIGGGDSVAAV 364

Query: 61  EKVGVADVMSHISTGGGASLELLEGKELPGVLALDEA 97
           EKVG+AD MSHISTGGGASLELLEGK+LPGVLALD+A
Sbjct: 365 EKVGLADKMSHISTGGGASLELLEGKQLPGVLALDDA 401


>Glyma08g17600.1 
          Length = 401

 Score =  174 bits (441), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 87/97 (89%), Positives = 93/97 (95%)

Query: 1   VKTFSEALETTKTVIWNGPMGVFEFDKFAVGTEAIAKKLAELSGKGVTTIIGGGDSVAAV 60
           +KTF EAL+ T+TVIWNGPMGVFEFDKFA GTEAIAKKLAELSGKGVTTIIGGGDSVAAV
Sbjct: 305 IKTFGEALDKTQTVIWNGPMGVFEFDKFATGTEAIAKKLAELSGKGVTTIIGGGDSVAAV 364

Query: 61  EKVGVADVMSHISTGGGASLELLEGKELPGVLALDEA 97
           EKVG+AD MSHISTGGGASLELLEGK+LPGVLALD+A
Sbjct: 365 EKVGLADKMSHISTGGGASLELLEGKQLPGVLALDDA 401