Jatropha Genome Database

JcCB0354521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0354521.10 - phase: 0 
         (145 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g28120.1                                                       219   7e-58
Glyma20g35490.1                                                       165   1e-41
Glyma10g32130.1                                                        54   4e-08

>Glyma09g28120.1 
          Length = 367

 Score =  219 bits (558), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 105/142 (73%), Positives = 117/142 (82%)

Query: 1   MESSSELVPFPLLMTPIESNYRACTIPYRFPSDNPRKATPTELQWIDLFYSSIPSFKKRA 60
           MES+SELV FPLL+TPI+SNYRACTIPYRFPSDNPRK TPTE+ WIDLF +SIPSFKKRA
Sbjct: 1   MESASELVEFPLLLTPIDSNYRACTIPYRFPSDNPRKPTPTEISWIDLFLNSIPSFKKRA 60

Query: 61  ENDTTVTDAPAKAEKFAQRYSEILEDLKKDPESHGGPPDCILLCRLREQILRELGFRDIX 120
           E+DT+V DA AKAEKFAQRY++ILEDLKKDPESHGGPPDCILLCRLRE +LRELGFRDI 
Sbjct: 61  ESDTSVPDAAAKAEKFAQRYADILEDLKKDPESHGGPPDCILLCRLRELVLRELGFRDIF 120

Query: 121 XXXXXXXXXXXXLIFKKVNELT 142
                        +F+ V  L 
Sbjct: 121 KKVKDEENAKAISLFENVVHLN 142


>Glyma20g35490.1 
          Length = 366

 Score =  165 bits (418), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 79/119 (66%), Positives = 93/119 (78%), Gaps = 3/119 (2%)

Query: 1   MESSSELVPFPLLMTPIESNYRACTIPYRFPSDNPRKATPTELQWIDLFYSSIPSFKKRA 60
           +ES+S+LVPFPLL      NY ACTIP+RFPSD+P   TPTEL WI+L  ++IP+FKK A
Sbjct: 3   IESTSQLVPFPLLTN---GNYTACTIPWRFPSDDPSIPTPTELSWINLLLNTIPTFKKHA 59

Query: 61  ENDTTVTDAPAKAEKFAQRYSEILEDLKKDPESHGGPPDCILLCRLREQILRELGFRDI 119
           ENDT+V DA  KAE FAQRY+ ILED KKDP S G P D ++LCRLREQ+LRE GFRDI
Sbjct: 60  ENDTSVPDAANKAENFAQRYARILEDFKKDPASQGRPLDILILCRLREQVLREQGFRDI 118


>Glyma10g32130.1 
          Length = 296

 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 23/44 (52%), Positives = 30/44 (68%)

Query: 61  ENDTTVTDAPAKAEKFAQRYSEILEDLKKDPESHGGPPDCILLC 104
           E DT++ DA  KAE+FAQR++ I+ED KKDP   G P D +  C
Sbjct: 1   EGDTSIPDATTKAEEFAQRFARIIEDFKKDPARQGVPLDVLQFC 44