Jatropha Genome Database

JcCB0347911.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0347911.10 + phase: 0 /partial
         (316 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g37270.1                                                       596   e-170
Glyma11g08020.1                                                       594   e-170
Glyma02g37020.1                                                        52   8e-07
Glyma17g07740.1                                                        52   1e-06
Glyma08g11510.1                                                        51   2e-06
Glyma05g28510.1                                                        50   3e-06

>Glyma01g37270.1 
          Length = 365

 Score =  596 bits (1536), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 284/313 (90%), Positives = 299/313 (95%), Gaps = 6/313 (1%)

Query: 4   KDTAGSGSATVNGDASAATPPQKHKIALITGITGQDGSYLTEFLLNKGYEVHGLIRRSSN 63
           ++T GSGSAT NG      PP+K  +ALITGITGQDGSYLTEFLL+KGYEVHGLIRRSSN
Sbjct: 2   ENTEGSGSAT-NG---VLAPPRK--VALITGITGQDGSYLTEFLLDKGYEVHGLIRRSSN 55

Query: 64  FNTQRINHIYIDPHNAHKARMKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFE 123
           FNTQRI+HIY+DPHNAHKARMKLHYADL+DASSLRRWLDTILPDEVYNLAAQSHVAVSFE
Sbjct: 56  FNTQRIDHIYVDPHNAHKARMKLHYADLSDASSLRRWLDTILPDEVYNLAAQSHVAVSFE 115

Query: 124 IPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPRS 183
           IPDYTADVVATGALRLLEAVRSHI+A+GRSHIRYYQAGSSEMFG+TPPPQSETTPFHPRS
Sbjct: 116 IPDYTADVVATGALRLLEAVRSHISASGRSHIRYYQAGSSEMFGATPPPQSETTPFHPRS 175

Query: 184 PYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKTGLQNK 243
           PYAASKCAAHWYTVNYREAY LFACNGILFNHESPRRGENFVTRKITRAVGRIK GLQ+K
Sbjct: 176 PYAASKCAAHWYTVNYREAYSLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQSK 235

Query: 244 LFLGNLSASRDWGFAGDYVEAMWMMLQQEMPDDYVVATEESHTVEEFLEVAFGYVGLNWK 303
           LFLGNL ASRDWGFAGDYVEAMW+MLQQ+ PDDYVVATEESHTVEEFLEVAFGYVGLNW+
Sbjct: 236 LFLGNLQASRDWGFAGDYVEAMWLMLQQDKPDDYVVATEESHTVEEFLEVAFGYVGLNWR 295

Query: 304 DHVVIDKRYFRPA 316
           DHVVIDKRYFRPA
Sbjct: 296 DHVVIDKRYFRPA 308


>Glyma11g08020.1 
          Length = 365

 Score =  594 bits (1531), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 283/313 (90%), Positives = 296/313 (94%), Gaps = 6/313 (1%)

Query: 4   KDTAGSGSATVNGDASAATPPQKHKIALITGITGQDGSYLTEFLLNKGYEVHGLIRRSSN 63
           ++T GS SAT NG       P   K+ALITGITGQDGSYLTEFLL+KGYEVHGLIRRSSN
Sbjct: 2   ENTEGSRSAT-NG-----VLPLARKVALITGITGQDGSYLTEFLLDKGYEVHGLIRRSSN 55

Query: 64  FNTQRINHIYIDPHNAHKARMKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFE 123
           FNTQRI+HIY+DPHNAHKARMKLHYADL+DASSLRRWLDTILPDEVYNLAAQSHVAVSFE
Sbjct: 56  FNTQRIDHIYVDPHNAHKARMKLHYADLSDASSLRRWLDTILPDEVYNLAAQSHVAVSFE 115

Query: 124 IPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPRS 183
           IPDYTADVVATGALRLLEAVRSHIAA+GRSHIRYYQAGSSEMFG+TPPPQSETTPFHPRS
Sbjct: 116 IPDYTADVVATGALRLLEAVRSHIAASGRSHIRYYQAGSSEMFGATPPPQSETTPFHPRS 175

Query: 184 PYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKTGLQNK 243
           PYAASKCAAHWYTVNYREAY LFACNGILFNHESPRRGENFVTRKITRAVGRIK GLQ+K
Sbjct: 176 PYAASKCAAHWYTVNYREAYSLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQSK 235

Query: 244 LFLGNLSASRDWGFAGDYVEAMWMMLQQEMPDDYVVATEESHTVEEFLEVAFGYVGLNWK 303
           LFLGNL ASRDWGFAGDYVEAMW+MLQQE PDDYVVATEESHTVEEFLEVAFGYVGLNW+
Sbjct: 236 LFLGNLQASRDWGFAGDYVEAMWLMLQQEKPDDYVVATEESHTVEEFLEVAFGYVGLNWR 295

Query: 304 DHVVIDKRYFRPA 316
           DHVVIDKRYFRP+
Sbjct: 296 DHVVIDKRYFRPS 308


>Glyma02g37020.1 
          Length = 431

 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 86/193 (44%), Gaps = 27/193 (13%)

Query: 31  LITGITGQDGSYLTEFLLNKGYEVHGLIRRSSNFNTQRINHIYIDP--HNAHKARMKLHY 88
           L+TG  G  GS+++  L  +G  V GL     NFN       Y DP    A K+ +  H 
Sbjct: 94  LVTGAAGFVGSHVSLALKRRGDGVVGL----DNFND------YYDPSLKKARKSLLAKHD 143

Query: 89  -----ADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAV 143
                 DL DA  L +  D +    V +LAAQ+ V  + E P         G + LLEA 
Sbjct: 144 VFIVDGDLNDAKLLAKLFDVVAFTHVMHLAAQAGVRYAMENPHSYVHSNIAGLVTLLEAC 203

Query: 144 RSHIAATGRSHIRYYQAGSSEMFG---STPPPQSETTPFHPRSPYAASKCAAHWYTVNYR 200
           +S   A  +  + +  A SS ++G     P  +S+ T   P S YAA+K A    T  Y 
Sbjct: 204 KS---ANPQPAVVW--ASSSSVYGLNEKVPFSESDQTD-RPASLYAATKKAGEEITHTYN 257

Query: 201 EAYGLFACNGILF 213
             YGL +  G+ F
Sbjct: 258 HIYGL-SITGLRF 269


>Glyma17g07740.1 
          Length = 431

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 82/193 (42%), Gaps = 27/193 (13%)

Query: 31  LITGITGQDGSYLTEFLLNKGYEVHGLIRRSSNFNTQRINHIYIDP--HNAHKARMKLH- 87
           L+TG  G  GS+++  L  +G  V GL     NFN       Y DP    A K+ +  H 
Sbjct: 94  LVTGAAGFVGSHVSLALKRRGDGVVGL----DNFND------YYDPSLKKARKSLLATHD 143

Query: 88  ----YADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAV 143
                 D+ DA  L +  D +    V +LAAQ+ V  + E P         G + LLEA 
Sbjct: 144 VFIVEGDVNDAKLLAKLFDVVAFTHVMHLAAQAGVRYAMENPHSYVHSNIAGLVTLLEAC 203

Query: 144 RSHIAATGRSHIRYYQAGSSEMFG---STPPPQSETTPFHPRSPYAASKCAAHWYTVNYR 200
           +     T         A SS ++G     P  +S+ T   P S YAA+K A    T  Y 
Sbjct: 204 K-----TANPQPAIVWASSSSVYGLNEKVPFSESDQTD-QPASLYAATKKAGEEITHTYN 257

Query: 201 EAYGLFACNGILF 213
             YGL +  G+ F
Sbjct: 258 HIYGL-SITGLRF 269


>Glyma08g11510.1 
          Length = 423

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 102/224 (45%), Gaps = 38/224 (16%)

Query: 6   TAGSGSATVNGDASAATPPQKHKIA-LITGITGQDGSYLTEFLLNKGYEVHGLIRRSSNF 64
           +A  G A  N    +A P + H ++ L+TG  G  GS+ +  L  +G  V GL     NF
Sbjct: 51  SAFHGPAWENQVRHSALPRRPHGMSVLVTGAAGFVGSHCSLSLKKRGDGVLGL----DNF 106

Query: 65  NTQRINHIYIDP-------HNAHKARMKLHYADLTDASSLRRWLDTILPDEVYNLAAQSH 117
           N+      Y DP       H   K ++ +  ADL DA  L +  D +    V +LAAQ+ 
Sbjct: 107 NS------YYDPSLKRARQHLLAKHQILIIEADLNDAPLLAKIFDVVSFSHVLHLAAQAG 160

Query: 118 VAVSFEIP-DYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQSET 176
           V  + + P  Y A  +A G + LLEA ++   A  +  I +  A SS ++G      ++ 
Sbjct: 161 VRYAMQNPHSYVASNIA-GFVTLLEASKN---ANPQPAIVW--ASSSSVYG-----LNDE 209

Query: 177 TPF-------HPRSPYAASKCAAHWYTVNYREAYGLFACNGILF 213
           +PF        P S YAA+K A       Y   YGL +  G+ F
Sbjct: 210 SPFSELHRTDQPASLYAATKKAGEAIAHTYNHIYGL-SLTGLRF 252


>Glyma05g28510.1 
          Length = 416

 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 84/193 (43%), Gaps = 27/193 (13%)

Query: 31  LITGITGQDGSYLTEFLLNKGYEVHGLIRRSSNFNTQRINHIYIDP-------HNAHKAR 83
           L+TG  G  GS+ +  L  +G  V GL     NFN       Y DP       H   K R
Sbjct: 74  LVTGAAGFVGSHCSLALKKRGDGVLGL----DNFNP------YYDPSLKRARQHLLAKHR 123

Query: 84  MKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPD-YTADVVATGALRLLEA 142
           + +  ADL DA  L +  D +    V +LAAQ+ V  + + P  Y A  +A G + LLEA
Sbjct: 124 ILIIEADLNDAPLLAKLFDVVSFSHVLHLAAQAGVRYAMQNPQSYVASNIA-GFVTLLEA 182

Query: 143 VRSHIAATGRSHIRYYQAGSSEMFG-STPPPQSET-TPFHPRSPYAASKCAAHWYTVNYR 200
            +     T         A SS ++G +   P SE      P S YAA+K A       Y 
Sbjct: 183 SK-----TSNPQPAIVWASSSSVYGLNNESPFSELHRTDQPASLYAATKKAGEAIAHTYN 237

Query: 201 EAYGLFACNGILF 213
             YGL +  G+ F
Sbjct: 238 HIYGL-SLTGLRF 249