Jatropha Genome Database

JcCB0342441.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0342441.10 + phase: 0 
         (415 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g02290.1                                                       536   e-152
Glyma04g02230.1                                                       534   e-152
Glyma19g36580.1                                                        72   9e-13
Glyma13g20390.1                                                        72   1e-12
Glyma03g33830.1                                                        71   2e-12
Glyma03g33830.2                                                        71   3e-12

>Glyma06g02290.1 
          Length = 434

 Score =  536 bits (1381), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 261/407 (64%), Positives = 318/407 (78%), Gaps = 5/407 (1%)

Query: 12  ILGAPGVRGKRVTHLSKDG--LTDFMQSIIFNKQNDKEPFYVLDLGVVVSLMDKWTRALP 69
           I  A GV+GKRVT LS +   LTDF+Q+II +K +   PF VLDLGVV+ LMDKW   LP
Sbjct: 22  IFSASGVKGKRVTALSAEANALTDFIQAIIADKPDIDSPFSVLDLGVVMGLMDKWACKLP 81

Query: 70  MVRPFYAVKCNPDRALLGTLASLGSNFDCASRAEIESVLSLGVSPERIVYANPCKAESHI 129
            V+PFYAVKCNP+ +L+G LA+LGS+FDCAS+AEIESVLSLGVSP+RI+YANPCK+ESHI
Sbjct: 82  TVQPFYAVKCNPNLSLIGALAALGSSFDCASKAEIESVLSLGVSPDRIIYANPCKSESHI 141

Query: 130 QYAASVGVNLTTFDSRDELDKIRKWHPLCGLLIRIKAPDDGGARCPLGPKYGALAEEVKP 189
           +YAASVGVN+TT+DS DE++KIR  HP C LL+RIK P D GAR  LG KYGAL EEV  
Sbjct: 142 RYAASVGVNVTTYDSLDEVEKIRNCHPTCELLLRIKPPQDSGARTSLGLKYGALPEEVHE 201

Query: 190 LLQAAQAAHLKVVGVSFHIGSGATNSRAYRGXXXXXXXXXXXXSRLGMPKMNVLNIGGGF 249
           LLQAA  A LKV GVSFHIGSG  ++RAY G            S LG+P+M VL+IGGGF
Sbjct: 202 LLQAAHEAGLKVTGVSFHIGSGGADTRAYDGAISAAKNVFEMASGLGLPRMRVLDIGGGF 261

Query: 250 TAGLQFDDAAVAIRSALQAYFPNEPELKIISEPGRFFAESAFTLATNIIGKRVRGELREY 309
           T+G  F+ AA+ I +A+QA F NE  L +I EPGR+FAE+AFTLAT IIGKRVRG++REY
Sbjct: 262 TSGPPFEAAALKINAAIQASFGNEEGLVVIGEPGRYFAETAFTLATRIIGKRVRGDVREY 321

Query: 310 WINDGIYGSMNCLLYDHATVTCAPLSCASNRGNPTCK---GLKRYSSTVFGPTCDALDTV 366
           WI+DGIYG++N +++D+ATVTC PL+C S   NP C     LK Y STVFGPTCD++DTV
Sbjct: 322 WIDDGIYGTLNNIVFDYATVTCMPLACTSKPENPRCSRELNLKTYPSTVFGPTCDSIDTV 381

Query: 367 LKGHQLPELQINDWLVFPNMGAYTVAAGSNFNGFKTGAILTYLAYSS 413
           L+ ++LP LQ+NDWLVFPNMGAYT ++G+NFNGF + A  T+LAYSS
Sbjct: 382 LRDYKLPGLQVNDWLVFPNMGAYTTSSGTNFNGFSSSAKSTFLAYSS 428


>Glyma04g02230.1 
          Length = 459

 Score =  534 bits (1375), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 260/407 (63%), Positives = 319/407 (78%), Gaps = 5/407 (1%)

Query: 12  ILGAPGVRGKRVTHLS--KDGLTDFMQSIIFNKQNDKEPFYVLDLGVVVSLMDKWTRALP 69
           I  A G++GKRVT LS  K+GLTDF+Q II +K +   PF VLDLGVV+ LMD+W   LP
Sbjct: 47  IFCASGIKGKRVTALSAEKNGLTDFIQRIIADKPDIDTPFSVLDLGVVMGLMDQWACKLP 106

Query: 70  MVRPFYAVKCNPDRALLGTLASLGSNFDCASRAEIESVLSLGVSPERIVYANPCKAESHI 129
            V+PFYAVKCNP+ +L+G LA+LGS+FDCAS+AEIESVLSLGVSP+RI+YANPCK+ESHI
Sbjct: 107 TVQPFYAVKCNPNLSLIGALAALGSSFDCASKAEIESVLSLGVSPDRIIYANPCKSESHI 166

Query: 130 QYAASVGVNLTTFDSRDELDKIRKWHPLCGLLIRIKAPDDGGARCPLGPKYGALAEEVKP 189
           +YAASVGVN+TT+DS DE++KIRK HP C LL+RIK P D GAR  LG KYGAL EEV  
Sbjct: 167 RYAASVGVNVTTYDSIDEVEKIRKCHPTCELLLRIKPPQDSGARTSLGLKYGALPEEVDE 226

Query: 190 LLQAAQAAHLKVVGVSFHIGSGATNSRAYRGXXXXXXXXXXXXSRLGMPKMNVLNIGGGF 249
           LLQAA  A LKV GVSFHIGSG  ++RAY G            SRLG+P+M VL+IGGGF
Sbjct: 227 LLQAAHEAGLKVTGVSFHIGSGGADTRAYHGAISAAKNVFESASRLGLPRMGVLDIGGGF 286

Query: 250 TAGLQFDDAAVAIRSALQAYFPNEPELKIISEPGRFFAESAFTLATNIIGKRVRGELREY 309
           T+G  F+ AA+ I +A++  F  E  L +I EPGR+FAE+AFTLAT +IGKRVRG++REY
Sbjct: 287 TSGPSFEAAALKINAAIEGSFGKEEGLVVIGEPGRYFAETAFTLATRVIGKRVRGDVREY 346

Query: 310 WINDGIYGSMNCLLYDHATVTCAPLSCASNRGNPTC---KGLKRYSSTVFGPTCDALDTV 366
           WI+DGIYG++N +++D+ATVTC PL+C S   NPTC     LK Y STVFGPTCD++DTV
Sbjct: 347 WIDDGIYGTLNNIVFDYATVTCMPLACTSKPENPTCCRDLNLKTYPSTVFGPTCDSIDTV 406

Query: 367 LKGHQLPELQINDWLVFPNMGAYTVAAGSNFNGFKTGAILTYLAYSS 413
           L+ +QLPELQ+NDWLVFPNMGAYT ++G+NFNGF + A   +LA SS
Sbjct: 407 LRDYQLPELQVNDWLVFPNMGAYTTSSGTNFNGFSSSAKSIFLACSS 453


>Glyma19g36580.1 
          Length = 488

 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 94/390 (24%), Positives = 150/390 (38%), Gaps = 48/390 (12%)

Query: 33  DFMQSIIFNKQNDKEPFYVLDLGVVVSLMDKWTRALPMVRPF--YAVKCNPDRALLGTLA 90
           D M+S+      ++ PFY+     +   ++ +  AL  +     YA+K N +  +L  L 
Sbjct: 88  DIMESV------ERRPFYLYSKPQITRNVEAYKDALEGLNSIIGYAIKANNNLKILEHLR 141

Query: 91  SLGSNFDCASRAEIESVLSLGVSPERIVYANPCKAESHIQYAASVGVNLTTFDSRDELDK 150
            LG      S  E++  L  G  P R ++    K    +  AA  GV     DS  +L+ 
Sbjct: 142 HLGCGAVLVSGNELKLALRAGFDPTRCIFNGNGKILEDLVLAAQEGV-FVNIDSEFDLEN 200

Query: 151 IRKWHPLCG----LLIRIKAPDDGGARCPL------GPKYGALAEEVKPLLQAAQAA--H 198
           I +     G    +L+RI  PD      P         K+G   E+++  L A +     
Sbjct: 201 IVEAAKRAGKKVNVLLRIN-PDVDPQVHPYVATGNKNSKFGIRNEKLQCFLDAVKEHPNE 259

Query: 199 LKVVGVSFHIGSGATNSRAYRGXXXXXXXXXXXXSRLGMPKMNVLNIGGGFTAGLQFDDA 258
           LK+VG   H+GS  T    +R                G  +++ LNIGGG         A
Sbjct: 260 LKLVGAHCHLGSTITKVDIFRDAATIMINYIDQIRDQGF-EVDYLNIGGGLGIDYYHSGA 318

Query: 259 AVAIRSALQAYFPN---EPELKIISEPGRFFAESAFTLATNIIGKRVRGELREYWINDGI 315
            +     L     +      L +I EPGR    +   L   + G +  G  + + + DG 
Sbjct: 319 ILPTPRDLIDTVRDLVISRGLNLIIEPGRSLIANTCCLVNRVTGVKTNGS-KNFIVIDG- 376

Query: 316 YGSMNCLL-------YDHATVTCAPLSCASNRGNPTCKGLKRYSSTVFGPTCDALDTVLK 368
             SM  L+       Y H  +            +P     +  +  V GP C++ D + K
Sbjct: 377 --SMAELIRPSLYDAYQHIELV-----------SPAPSNAETETFDVVGPVCESADFLGK 423

Query: 369 GHQLPELQINDWLVFPNMGAYTVAAGSNFN 398
           G +LP       LV  + GAY ++  S +N
Sbjct: 424 GRELPTPAKGTGLVVHDAGAYCMSMASTYN 453


>Glyma13g20390.1 
          Length = 488

 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 92/378 (24%), Positives = 143/378 (37%), Gaps = 42/378 (11%)

Query: 45  DKEPFYVLDLGVVVSLMDKWTRALPMVRPF--YAVKCNPDRALLGTLASLGSNFDCASRA 102
           ++ PFY+     +   ++ +  AL  +R    YA+K N +  +L  L  LG      S  
Sbjct: 94  ERRPFYLYSKPQITRNVEAYKDALEGLRSIIGYAIKANNNLKILEHLRQLGCGAVLVSGN 153

Query: 103 EIESVLSLGVSPERIVYANPCKAESHIQYAASVGVNLTTFDSRDELDKI----RKWHPLC 158
           E+   L  G  P R ++    K    +  AA  GV     DS  +L+ I    +      
Sbjct: 154 ELRLALRAGFDPTRCIFNGNGKVLDDLVLAAKEGV-FVNIDSEFDLENIIAAAKIAQKRV 212

Query: 159 GLLIRIKAPDDGGARCPL------GPKYGALAEEVKPLLQAAQAA--HLKVVGVSFHIGS 210
            +L+RI  PD      P         K+G   E+++  L A +     LK+VG   H+GS
Sbjct: 213 NVLLRIN-PDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKEHPNELKLVGAHCHLGS 271

Query: 211 GATNSRAYRGXXXXXXXXXXXXSRLGMPKMNVLNIGGGFTAGLQFDDAAVAIRSALQAYF 270
             T    +R                G  +++ LNIGGG     Q   A +     L    
Sbjct: 272 TITKVDIFRDAAIIMVNYIDQIRAQGF-EVDYLNIGGGLGIDYQHSGAVLPTPRDLIDTV 330

Query: 271 PN---EPELKIISEPGRFFAESAFTLATNIIGKRVRGELREYWINDGIYGSMNCLL---- 323
                   L +I EPGR    +   L   + G +  G  + + + DG   SM  L+    
Sbjct: 331 RELVLSRGLNLIIEPGRSLVANTCCLVNRVTGVKTNGS-KNFIVIDG---SMAELIRPSL 386

Query: 324 ---YDHATVTCAPLSCASNRGNPTCKGLKRYSSTVFGPTCDALDTVLKGHQLPELQINDW 380
              Y H  +            +P     +  +  V GP C++ D + K  QLP       
Sbjct: 387 YDAYQHIELV-----------SPAPANAEIANFDVVGPVCESADFLGKDRQLPTPAKGTG 435

Query: 381 LVFPNMGAYTVAAGSNFN 398
           LV  + GAY ++  S +N
Sbjct: 436 LVVHDAGAYCMSMASTYN 453


>Glyma03g33830.1 
          Length = 488

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 147/383 (38%), Gaps = 34/383 (8%)

Query: 33  DFMQSIIFNKQNDKEPFYVLDLGVVVSLMDKWTRALPMVRPF--YAVKCNPDRALLGTLA 90
           D M+S+      ++ PFY+     +   ++ +  AL  +     YA+K N +  +L  L 
Sbjct: 88  DIMESV------ERRPFYLYSKPQITRNVEAYKDALEGLSSIIGYAIKANNNLKILEHLR 141

Query: 91  SLGSNFDCASRAEIESVLSLGVSPERIVYANPCKAESHIQYAASVGVNLTTFDSRDELDK 150
            LG      S  E+   L  G  P R ++    K    +  AA  GV     DS  +L+ 
Sbjct: 142 HLGCGAVLVSGNELRLALRAGFDPTRCIFNGNGKILEDLVLAAQEGV-FVNIDSEFDLEN 200

Query: 151 IRKWHPLCG----LLIRIKAPDDGGARCPL------GPKYGALAEEVKPLLQAAQAA--H 198
           I +     G    +L+RI  PD      P         K+G   E+++  L A +     
Sbjct: 201 ITEAAKRAGKKVNVLLRIN-PDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKELPNE 259

Query: 199 LKVVGVSFHIGSGATNSRAYRGXXXXXXXXXXXXSRLGMPKMNVLNIGGGFTAGLQFDDA 258
           LK+VG   H+GS  T    +R                G  +++ LNIGGG         A
Sbjct: 260 LKLVGAHCHLGSTITKVDIFRDAATIMINYIDQIRDQGF-EVDYLNIGGGLGIDYYHSGA 318

Query: 259 AVAIRSALQAYFPN---EPELKIISEPGRFFAESAFTLATNIIGKRVRGELREYWINDGI 315
            +     L     +      L +I EPGR    +   L   + G +  G      I+  +
Sbjct: 319 ILPTPRDLIDTVRDLVISRGLNLIIEPGRSLIANTCCLVNRVTGVKSNGSKNFIVIDGSM 378

Query: 316 YGSMNCLLYDHATVTCAPLSCASNRGNPTCKGLKRYSSTVFGPTCDALDTVLKGHQLPEL 375
              +   LYD A      +S A +    T       +  V GP C++ D + KG +LP  
Sbjct: 379 AELIRPSLYD-AYQHIELVSPAPSNAETT-------TFDVVGPVCESADFLGKGRELPTP 430

Query: 376 QINDWLVFPNMGAYTVAAGSNFN 398
                LV  + GAY ++  S +N
Sbjct: 431 AKGTGLVVHDAGAYCMSMASTYN 453


>Glyma03g33830.2 
          Length = 463

 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 147/383 (38%), Gaps = 34/383 (8%)

Query: 33  DFMQSIIFNKQNDKEPFYVLDLGVVVSLMDKWTRALPMVRPF--YAVKCNPDRALLGTLA 90
           D M+S+      ++ PFY+     +   ++ +  AL  +     YA+K N +  +L  L 
Sbjct: 88  DIMESV------ERRPFYLYSKPQITRNVEAYKDALEGLSSIIGYAIKANNNLKILEHLR 141

Query: 91  SLGSNFDCASRAEIESVLSLGVSPERIVYANPCKAESHIQYAASVGVNLTTFDSRDELDK 150
            LG      S  E+   L  G  P R ++    K    +  AA  GV     DS  +L+ 
Sbjct: 142 HLGCGAVLVSGNELRLALRAGFDPTRCIFNGNGKILEDLVLAAQEGV-FVNIDSEFDLEN 200

Query: 151 IRKWHPLCG----LLIRIKAPDDGGARCPL------GPKYGALAEEVKPLLQAAQAA--H 198
           I +     G    +L+RI  PD      P         K+G   E+++  L A +     
Sbjct: 201 ITEAAKRAGKKVNVLLRIN-PDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKELPNE 259

Query: 199 LKVVGVSFHIGSGATNSRAYRGXXXXXXXXXXXXSRLGMPKMNVLNIGGGFTAGLQFDDA 258
           LK+VG   H+GS  T    +R                G  +++ LNIGGG         A
Sbjct: 260 LKLVGAHCHLGSTITKVDIFRDAATIMINYIDQIRDQGF-EVDYLNIGGGLGIDYYHSGA 318

Query: 259 AVAIRSALQAYFPN---EPELKIISEPGRFFAESAFTLATNIIGKRVRGELREYWINDGI 315
            +     L     +      L +I EPGR    +   L   + G +  G      I+  +
Sbjct: 319 ILPTPRDLIDTVRDLVISRGLNLIIEPGRSLIANTCCLVNRVTGVKSNGSKNFIVIDGSM 378

Query: 316 YGSMNCLLYDHATVTCAPLSCASNRGNPTCKGLKRYSSTVFGPTCDALDTVLKGHQLPEL 375
              +   LYD A      +S A +    T       +  V GP C++ D + KG +LP  
Sbjct: 379 AELIRPSLYD-AYQHIELVSPAPSNAETT-------TFDVVGPVCESADFLGKGRELPTP 430

Query: 376 QINDWLVFPNMGAYTVAAGSNFN 398
                LV  + GAY ++  S +N
Sbjct: 431 AKGTGLVVHDAGAYCMSMASTYN 453