Jatropha Genome Database

JcCB0341321.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0341321.10 + phase: 2 /partial
         (214 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g22170.1                                                        71   9e-13
Glyma07g03860.1                                                        71   1e-12
Glyma05g28820.1                                                        67   2e-11
Glyma15g01610.1                                                        60   3e-09
Glyma13g43730.1                                                        59   4e-09
Glyma12g29630.1                                                        55   4e-08
Glyma13g40180.1                                                        55   6e-08
Glyma04g34020.1                                                        53   2e-07
Glyma12g07330.1                                                        52   4e-07
Glyma06g20460.1                                                        51   7e-07
Glyma11g20680.1                                                        51   8e-07
Glyma05g14690.1                                                        48   7e-06
Glyma17g10690.1                                                        48   8e-06

>Glyma08g22170.1 
          Length = 353

 Score = 70.9 bits (172), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 2/75 (2%)

Query: 1   DRHKNALNSAEVYDIERNEWRILPNMIEDRDECHGMAFEGDNRFWVVSGYGTDSQGQFRS 60
           D  KNAL SA  YD+  + W +LP+M  +RDEC G+   G  RF  V GY T++QG+F  
Sbjct: 175 DNEKNALRSALAYDVSSDRWVVLPDMAAERDECKGVFSRG--RFVAVGGYPTETQGRFVK 232

Query: 61  DAECYDPDNGVWHKI 75
            AE +DP    W ++
Sbjct: 233 SAEAFDPATRSWSEV 247


>Glyma07g03860.1 
          Length = 354

 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 2/87 (2%)

Query: 1   DRHKNALNSAEVYDIERNEWRILPNMIEDRDECHGMAFEGDNRFWVVSGYGTDSQGQFRS 60
           D  KNAL SA  YD+  + W +LP+M  +RDEC G+   G  RF  V GY T++QG+F  
Sbjct: 175 DNEKNALRSALAYDVTSDLWVMLPDMEAERDECKGVFCRG--RFVAVGGYPTETQGRFVK 232

Query: 61  DAECYDPDNGVWHKITGVWPFSSTSPR 87
            AE +DP    W ++   +   +T PR
Sbjct: 233 SAEAFDPATRSWSEVKEDFLDCATCPR 259


>Glyma05g28820.1 
          Length = 385

 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)

Query: 1   DRHKNALNSAEVYDIERNEWRILPNMIEDRDECHGMAFEGDNRFWVVSGYGTDSQGQFRS 60
           D +KNAL++A  YD   +EW  L  M  +RDEC G+     + FWVVSGY T+ QG F  
Sbjct: 225 DENKNALSTAWAYDPRSDEWAGLDPMGRERDECEGVVI--GDEFWVVSGYSTERQGMFDG 282

Query: 61  DAECYDPDNGVWHKITGVW 79
            AE  D  +G W +  G W
Sbjct: 283 SAEVLDIGSGGWREENGFW 301


>Glyma15g01610.1 
          Length = 383

 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 1/87 (1%)

Query: 1   DRHKNALNSAEVYDIERNEWRILPNMIEDRDECHGMAFEGDNRFWVVSGYGTDSQGQFRS 60
           D  KNAL SA  YD+  + W  LP+M  +RDEC  + F       VV GY T+ QG+F  
Sbjct: 179 DEEKNALRSALAYDVAMDVWVPLPDMSRERDECKAV-FRRGGALCVVGGYCTEMQGRFER 237

Query: 61  DAECYDPDNGVWHKITGVWPFSSTSPR 87
            AE +D     W  +   +  ++  PR
Sbjct: 238 SAEVFDVAKWKWGPVEEEFLDAAACPR 264


>Glyma13g43730.1 
          Length = 358

 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 2/87 (2%)

Query: 1   DRHKNALNSAEVYDIERNEWRILPNMIEDRDECHGMAFEGDNRFWVVSGYGTDSQGQFRS 60
           D  KNAL S   YD+ R+ W  LP+M  +RDEC  +   G     VV GY T+ QG+F  
Sbjct: 180 DEEKNALRSVLAYDVARDLWVPLPDMSRERDECKAVFRRG--ALCVVGGYCTEMQGRFER 237

Query: 61  DAECYDPDNGVWHKITGVWPFSSTSPR 87
            AE +D     W  +   +  ++  PR
Sbjct: 238 SAEVFDVATWKWGPVEEEFMDAAACPR 264


>Glyma12g29630.1 
          Length = 364

 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 5/97 (5%)

Query: 1   DRHKNALNSAEVYDIERNEWRILPNMIEDRDECHGMAFEGDNRFWVVSGYGTDSQGQFRS 60
           D++ N L SAE+YD     W +LPNM   R  C G  F  D +F+V+ G  + +     S
Sbjct: 170 DKYGNVLKSAELYDSSTGMWELLPNMHTSRRLCSG--FFMDGKFYVIGGMSSTTVS--LS 225

Query: 61  DAECYDPDNGVWHKITGVWPFSSTSPRGATTIVSSVN 97
             E YD     W KI G++P+ +   + A  +V+ V+
Sbjct: 226 CGEEYDLKTRSWRKIEGMYPYVNVGVQ-APPLVAVVD 261


>Glyma13g40180.1 
          Length = 389

 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 5/97 (5%)

Query: 1   DRHKNALNSAEVYDIERNEWRILPNMIEDRDECHGMAFEGDNRFWVVSGYGTDSQGQFRS 60
           D++ N L SAE+YD     W +LPNM   R  C G  F  D +F+V+ G  + +     S
Sbjct: 195 DKYGNVLKSAELYDSSTGMWELLPNMHAPRRLCSG--FFMDGKFYVIGGMSSTTVS--LS 250

Query: 61  DAECYDPDNGVWHKITGVWPFSSTSPRGATTIVSSVN 97
             E YD     W KI G++P+ +   + A  +V+ V+
Sbjct: 251 CGEEYDLKTRSWRKIEGMYPYVNVGVQ-APPLVAVVD 286


>Glyma04g34020.1 
          Length = 441

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 3/80 (3%)

Query: 1   DRHKNALNSAEVYDIERNEWRILPNMIEDRDECHGMAFEGDNRFWVVSGYGTDSQGQFRS 60
           D   N L+SAE+Y+ E   W +LPNM + R  C G+  +G  +F+V+ G G  +  Q   
Sbjct: 242 DPRGNILSSAELYNSETGTWELLPNMNKARKMCSGVFIDG--KFYVIGGIGVGNSKQLTC 299

Query: 61  DAECYDPDNGVWHKITGVWP 80
             E +D     W KI  ++P
Sbjct: 300 GEE-FDLQTRKWQKIPNMFP 318


>Glyma12g07330.1 
          Length = 367

 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 7/104 (6%)

Query: 1   DRHKNALNSAEVYDIERNEWRILPNMIEDRDECHGMAFEGDNRFWVVSGYGTDSQGQFRS 60
           D++ N L SAE+YD     W +LPNM   R  C G  F  D +F+V+   G  S     +
Sbjct: 166 DKYGNVLESAELYDSNSGTWELLPNMHTPRRLCSG--FFMDGKFYVIG--GMSSPIVSLT 221

Query: 61  DAECYDPDNGVWHKITGVWPF---SSTSPRGATTIVSSVNKNEH 101
             E YD     W KI G++P+   ++ +P     + + +   EH
Sbjct: 222 CGEEYDLKTRNWRKIEGMYPYVNGAAQAPPLVAVVDNQLYAVEH 265


>Glyma06g20460.1 
          Length = 441

 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 3/80 (3%)

Query: 1   DRHKNALNSAEVYDIERNEWRILPNMIEDRDECHGMAFEGDNRFWVVSGYGTDSQGQFRS 60
           D   N L+SAE+Y+ E   W +LPNM + R  C G+  +G  +F+V+ G G  +  Q   
Sbjct: 242 DPRGNILSSAELYNSETGTWELLPNMNKARKMCSGVFIDG--KFYVIGGIGVGNSKQLTC 299

Query: 61  DAECYDPDNGVWHKITGVWP 80
             E +D     W +I  ++P
Sbjct: 300 GEE-FDLQTRKWREIPNMFP 318


>Glyma11g20680.1 
          Length = 341

 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 7/104 (6%)

Query: 1   DRHKNALNSAEVYDIERNEWRILPNMIEDRDECHGMAFEGDNRFWVVSGYGTDSQGQFRS 60
           D++ N L SAE+YD     W++LPNM   R  C G  F  D +F+V+ G  + +     +
Sbjct: 140 DKYGNVLESAELYDSNSGTWKLLPNMHTPRRLCSG--FFMDGKFYVIGGMSSPTVSL--T 195

Query: 61  DAECYDPDNGVWHKITGVWPF---SSTSPRGATTIVSSVNKNEH 101
             E YD     W KI  ++P+   ++ +P     + + +   EH
Sbjct: 196 CGEEYDLKTRNWRKIERMYPYVNGAAQAPPLVAVVDNQLYAVEH 239


>Glyma05g14690.1 
          Length = 353

 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 11/99 (11%)

Query: 4   KNALNSAEVYDIERNEWRILPNMIEDRDECHGMAFEGDNRFWVVSGYGTDSQGQFRSDAE 63
           +  L+SAE Y+ E + W  LP MI+ R  C G     DN+F+V+ G     Q + + D  
Sbjct: 162 REVLSSAEKYNSESHIWEQLPRMIQKRKSCSGCYL--DNKFYVLGG-----QNEQKKDLT 214

Query: 64  C---YDPDNGVWHKITGVWP-FSSTSPRGATTIVSSVNK 98
           C   YD D   W+ +  ++     ++PR    I  + N+
Sbjct: 215 CGEFYDEDTNTWNLVPAMFKDIPLSTPRSPPLIAVANNE 253


>Glyma17g10690.1 
          Length = 374

 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 6/93 (6%)

Query: 7   LNSAEVYDIERNEWRILPNMIEDRDECHGMAFEGDNRFWVVSGYGTDSQGQFRSDAECYD 66
           L+ AE+Y+ +   W +LPNM + R  C G+  +G  +F+ + G G D  G   +  E YD
Sbjct: 190 LSVAELYNSDTKTWEVLPNMNKARKMCSGVFMDG--KFYAIGGMGED--GNRLTCGEEYD 245

Query: 67  PDNGVWHKITGVWPFSSTSPRG--ATTIVSSVN 97
            D   W  I  + P     P G  A  +V+ VN
Sbjct: 246 LDTKEWRVIPNMVPPRIQGPDGPEAPPLVAVVN 278