Jatropha Genome Database

JcCB0339221.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0339221.10 + phase: 0 
         (172 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g39370.1                                                        66   2e-11
Glyma16g05060.1                                                        65   2e-11
Glyma19g28110.1                                                        65   3e-11
Glyma02g07470.1                                                        64   1e-10
Glyma16g26470.1                                                        61   5e-10
Glyma06g14890.1                                                        60   9e-10
Glyma04g39960.1                                                        60   9e-10
Glyma19g01400.1                                                        60   1e-09
Glyma13g23960.1                                                        60   1e-09
Glyma19g45260.1                                                        60   2e-09
Glyma02g03830.1                                                        59   2e-09
Glyma01g03850.1                                                        58   5e-09
Glyma03g42480.1                                                        57   8e-09
Glyma08g39860.1                                                        55   3e-08
Glyma05g37270.1                                                        54   6e-08
Glyma18g18810.1                                                        53   1e-07

>Glyma02g39370.1 
          Length = 616

 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 29/38 (76%), Positives = 33/38 (86%)

Query: 84  YQSFGVVYGDLCTSPLYVYKSTFSGSLRLYEEDHEIFG 121
           YQS G+VYGDL TSPLYVYK+TFSG LRL E++ EIFG
Sbjct: 1   YQSLGIVYGDLSTSPLYVYKTTFSGKLRLKEDEEEIFG 38


>Glyma16g05060.1 
          Length = 785

 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/44 (68%), Positives = 35/44 (79%)

Query: 78  RTLLLAYQSFGVVYGDLCTSPLYVYKSTFSGSLRLYEEDHEIFG 121
           R LLLAYQSFGVVYGDL TSPLYV+ STF G L+ + ++  IFG
Sbjct: 23  RNLLLAYQSFGVVYGDLSTSPLYVFTSTFKGKLQNHHDEETIFG 66


>Glyma19g28110.1 
          Length = 785

 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 30/44 (68%), Positives = 35/44 (79%)

Query: 78  RTLLLAYQSFGVVYGDLCTSPLYVYKSTFSGSLRLYEEDHEIFG 121
           R LLLAYQSFGVVYGDL TSPLYV+ STF G L+ + ++  IFG
Sbjct: 23  RNLLLAYQSFGVVYGDLSTSPLYVFTSTFRGKLQNHHDEETIFG 66


>Glyma02g07470.1 
          Length = 750

 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 55/131 (41%), Gaps = 40/131 (30%)

Query: 78  RTLLLAYQSFGVVYGDLCTSPLYVYKSTFSGSLRLYEEDHEIFG---------------- 121
           + LLLAYQSFGVVYGDL TSPLYVY ST SG L+ +  +  IFG                
Sbjct: 24  KYLLLAYQSFGVVYGDLSTSPLYVYTSTLSGKLQNHRHEEVIFGIFSLIFWTLTLIPLLK 83

Query: 122 -------------PTKESKTSLLIKE-----------FFEXXXXXXXXXXXXXXXGTSMV 157
                         T+    SL+ K+           F E               G  MV
Sbjct: 84  YAVIILNVDDNGEGTQTLAYSLINKQLMRNCHATKMRFLENHRSLKTALLVMMLLGACMV 143

Query: 158 IGDGILTPTMS 168
           IGDG+ +P +S
Sbjct: 144 IGDGVFSPAIS 154


>Glyma16g26470.1 
          Length = 753

 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 30/42 (71%), Positives = 33/42 (78%)

Query: 80  LLLAYQSFGVVYGDLCTSPLYVYKSTFSGSLRLYEEDHEIFG 121
           LLLAYQSFGVVYGDL TSPLYVY ST SG L+ +  +  IFG
Sbjct: 1   LLLAYQSFGVVYGDLSTSPLYVYTSTLSGKLQSHLNEEVIFG 42


>Glyma06g14890.1 
          Length = 790

 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 29/46 (63%), Positives = 33/46 (71%)

Query: 76  YKRTLLLAYQSFGVVYGDLCTSPLYVYKSTFSGSLRLYEEDHEIFG 121
           +K  LLLAYQS GVVYGDL  SPLYVY STF+  +   E + EIFG
Sbjct: 16  WKTILLLAYQSLGVVYGDLSISPLYVYTSTFAEDIEHSETNEEIFG 61


>Glyma04g39960.1 
          Length = 790

 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 29/46 (63%), Positives = 33/46 (71%)

Query: 76  YKRTLLLAYQSFGVVYGDLCTSPLYVYKSTFSGSLRLYEEDHEIFG 121
           +K  LLLAYQS GVVYGDL  SPLYVY STF+  +   E + EIFG
Sbjct: 16  WKTILLLAYQSLGVVYGDLSISPLYVYTSTFAEDIEHSETNEEIFG 61


>Glyma19g01400.1 
          Length = 780

 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 36/49 (73%)

Query: 73  QQLYKRTLLLAYQSFGVVYGDLCTSPLYVYKSTFSGSLRLYEEDHEIFG 121
           ++ +K  L LAYQS GVVYGDL TSPLYVYKS F+  ++  + + EI+G
Sbjct: 14  EESWKTVLTLAYQSLGVVYGDLSTSPLYVYKSAFAEDIQHSDTNEEIYG 62


>Glyma13g23960.1 
          Length = 779

 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 36/49 (73%)

Query: 73  QQLYKRTLLLAYQSFGVVYGDLCTSPLYVYKSTFSGSLRLYEEDHEIFG 121
           ++ +K  L LAYQS GVVYGDL TSPLYVYKS F+  ++  + + EI+G
Sbjct: 14  EESWKTVLTLAYQSLGVVYGDLSTSPLYVYKSAFAEDIQHSDTNEEIYG 62


>Glyma19g45260.1 
          Length = 796

 Score = 59.7 bits (143), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 50/165 (30%), Positives = 65/165 (39%), Gaps = 62/165 (37%)

Query: 70  NYMQQLYKRTLLLAYQSFGVVYGDLCTSPLYVYKSTFS---------------------- 107
           N  Q  ++ TL+LA+QS GVVYGD+ TSPLYVY STF+                      
Sbjct: 56  NPYQMGWRTTLILAFQSIGVVYGDIGTSPLYVYASTFTKKINNNDDILGVLSLIIYTIVL 115

Query: 108 -------------------GSLRLYE----------------EDHEIFG-----PTKESK 127
                              G+  LY                 ED E+       P+ E K
Sbjct: 116 IPLLKYVFIVLWANDNGNGGAFALYSLICRHIKMSLIPNQEPEDRELSNYKLETPSTEFK 175

Query: 128 TSLLIKEFFEXXXXXXXXXXXXXXXGTSMVIGDGILTPTMSGTSS 172
            +  +K+  E               GTSMVIGDGILTP++S  S+
Sbjct: 176 RAQKLKQKLEGSHVARVVLILLAIVGTSMVIGDGILTPSISVLSA 220


>Glyma02g03830.1 
          Length = 760

 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 36/49 (73%)

Query: 73  QQLYKRTLLLAYQSFGVVYGDLCTSPLYVYKSTFSGSLRLYEEDHEIFG 121
           ++ ++  L LAYQS GVVYGDL  SPLYV++STF+  ++  E + E+FG
Sbjct: 15  RESWRTVLTLAYQSLGVVYGDLSISPLYVFRSTFAEDIKHTESNEEVFG 63


>Glyma01g03850.1 
          Length = 788

 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 36/49 (73%)

Query: 73  QQLYKRTLLLAYQSFGVVYGDLCTSPLYVYKSTFSGSLRLYEEDHEIFG 121
           ++ ++  + LAYQS GVVYGDL  SPLYV++STF+  ++  E + E+FG
Sbjct: 23  RESWRTVVTLAYQSLGVVYGDLSISPLYVFRSTFAEDIKHTESNEEVFG 71


>Glyma03g42480.1 
          Length = 525

 Score = 57.4 bits (137), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 63/159 (39%), Gaps = 62/159 (38%)

Query: 76  YKRTLLLAYQSFGVVYGDLCTSPLYVYKSTFS---------------------------- 107
           ++ TL LA+QS GVVYGD+ TSPLYVY STF+                            
Sbjct: 3   WRTTLSLAFQSIGVVYGDIGTSPLYVYASTFTKKINNTDDILGVLSLIIYSIVLIPLLKY 62

Query: 108 -------------GSLRLYE----------------EDHEIFG-----PTKESKTSLLIK 133
                        G++ LY                 ED E+       P+ E K +  +K
Sbjct: 63  VFIVLWANDNGNGGAIALYSLIFRHIKMSLIPNQQPEDRELSNYKLETPSTEFKRAQKLK 122

Query: 134 EFFEXXXXXXXXXXXXXXXGTSMVIGDGILTPTMSGTSS 172
           +  E               GTSMVIG+GILTP++S  S+
Sbjct: 123 QKLEDSHVARIVLLLLAIMGTSMVIGEGILTPSISVLSA 161


>Glyma08g39860.1 
          Length = 784

 Score = 55.5 bits (132), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/49 (51%), Positives = 36/49 (73%)

Query: 73  QQLYKRTLLLAYQSFGVVYGDLCTSPLYVYKSTFSGSLRLYEEDHEIFG 121
           ++ +K  L LAYQS GVVYG++ TSPLYVY++TF+  +   E + EI+G
Sbjct: 15  KESWKTVLTLAYQSLGVVYGEISTSPLYVYRNTFAEDIGHSETNEEIYG 63


>Glyma05g37270.1 
          Length = 790

 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 32/46 (69%)

Query: 76  YKRTLLLAYQSFGVVYGDLCTSPLYVYKSTFSGSLRLYEEDHEIFG 121
           Y+  L LAYQS G ++GDL  SPLYVY+S FSG L+  + +  IFG
Sbjct: 21  YRALLFLAYQSLGFMFGDLTLSPLYVYQSIFSGRLKNVQHEDAIFG 66


>Glyma18g18810.1 
          Length = 775

 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/42 (57%), Positives = 32/42 (76%)

Query: 80  LLLAYQSFGVVYGDLCTSPLYVYKSTFSGSLRLYEEDHEIFG 121
           L LAYQS GVVYG++ TSPLYVY++TF+  +   E + EI+G
Sbjct: 17  LTLAYQSLGVVYGEISTSPLYVYRNTFAEDIGHSETNEEIYG 58