Jatropha Genome Database

JcCB0337681.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0337681.10 + phase: 0 /partial
         (77 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g17420.2                                                        72   1e-13
Glyma13g17420.1                                                        72   1e-13
Glyma09g08550.1                                                        70   6e-13
Glyma09g08550.4                                                        69   8e-13
Glyma09g08550.3                                                        69   8e-13
Glyma09g08550.2                                                        69   8e-13
Glyma15g20180.2                                                        67   6e-12
Glyma15g20180.1                                                        67   6e-12
Glyma15g20180.3                                                        65   1e-11

>Glyma13g17420.2 
          Length = 805

 Score = 72.0 bits (175), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/77 (48%), Positives = 54/77 (70%), Gaps = 2/77 (2%)

Query: 1  MANPKLGRIPSMRERVEDTLSAHRNELVSLLCRYVDQGKGILQPHTLIDELDSVVGEDGT 60
          MA  +L R+ S+RER+++TL+A+RNE+++LL R   +GKGILQ H +I E + +  E+  
Sbjct: 1  MATDRLTRVHSLRERLDETLTANRNEILALLSRIEAKGKGILQHHQVIAEFEEIPEEN-- 58

Query: 61 RLGLRDGPFGEALKSAQ 77
          R  L DG FGE L+S Q
Sbjct: 59 RQKLTDGAFGEVLRSTQ 75


>Glyma13g17420.1 
          Length = 805

 Score = 72.0 bits (175), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/77 (48%), Positives = 54/77 (70%), Gaps = 2/77 (2%)

Query: 1  MANPKLGRIPSMRERVEDTLSAHRNELVSLLCRYVDQGKGILQPHTLIDELDSVVGEDGT 60
          MA  +L R+ S+RER+++TL+A+RNE+++LL R   +GKGILQ H +I E + +  E+  
Sbjct: 1  MATDRLTRVHSLRERLDETLTANRNEILALLSRIEAKGKGILQHHQVIAEFEEIPEEN-- 58

Query: 61 RLGLRDGPFGEALKSAQ 77
          R  L DG FGE L+S Q
Sbjct: 59 RQKLTDGAFGEVLRSTQ 75


>Glyma09g08550.1 
          Length = 810

 Score = 70.1 bits (170), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 2/77 (2%)

Query: 1  MANPKLGRIPSMRERVEDTLSAHRNELVSLLCRYVDQGKGILQPHTLIDELDSVVGEDGT 60
          MAN  L    S RER ++TL+ HRNE+++LL R   +GKGILQ H ++ E + +  E  +
Sbjct: 1  MANHPLTHSHSFRERFDETLTGHRNEILALLSRLEAKGKGILQHHQVVAEFEEIPEE--S 58

Query: 61 RLGLRDGPFGEALKSAQ 77
          R  L+DG FGE L+S Q
Sbjct: 59 RKKLQDGVFGEVLRSTQ 75


>Glyma09g08550.4 
          Length = 775

 Score = 69.3 bits (168), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 2/77 (2%)

Query: 1  MANPKLGRIPSMRERVEDTLSAHRNELVSLLCRYVDQGKGILQPHTLIDELDSVVGEDGT 60
          MAN  L    S RER ++TL+ HRNE+++LL R   +GKGILQ H ++ E + +  E  +
Sbjct: 1  MANHPLTHSHSFRERFDETLTGHRNEILALLSRLEAKGKGILQHHQVVAEFEEIPEE--S 58

Query: 61 RLGLRDGPFGEALKSAQ 77
          R  L+DG FGE L+S Q
Sbjct: 59 RKKLQDGVFGEVLRSTQ 75


>Glyma09g08550.3 
          Length = 806

 Score = 69.3 bits (168), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 2/77 (2%)

Query: 1  MANPKLGRIPSMRERVEDTLSAHRNELVSLLCRYVDQGKGILQPHTLIDELDSVVGEDGT 60
          MAN  L    S RER ++TL+ HRNE+++LL R   +GKGILQ H ++ E + +  E  +
Sbjct: 1  MANHPLTHSHSFRERFDETLTGHRNEILALLSRLEAKGKGILQHHQVVAEFEEIPEE--S 58

Query: 61 RLGLRDGPFGEALKSAQ 77
          R  L+DG FGE L+S Q
Sbjct: 59 RKKLQDGVFGEVLRSTQ 75


>Glyma09g08550.2 
          Length = 806

 Score = 69.3 bits (168), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 2/77 (2%)

Query: 1  MANPKLGRIPSMRERVEDTLSAHRNELVSLLCRYVDQGKGILQPHTLIDELDSVVGEDGT 60
          MAN  L    S RER ++TL+ HRNE+++LL R   +GKGILQ H ++ E + +  E  +
Sbjct: 1  MANHPLTHSHSFRERFDETLTGHRNEILALLSRLEAKGKGILQHHQVVAEFEEIPEE--S 58

Query: 61 RLGLRDGPFGEALKSAQ 77
          R  L+DG FGE L+S Q
Sbjct: 59 RKKLQDGVFGEVLRSTQ 75


>Glyma15g20180.2 
          Length = 806

 Score = 66.6 bits (161), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 2/77 (2%)

Query: 1  MANPKLGRIPSMRERVEDTLSAHRNELVSLLCRYVDQGKGILQPHTLIDELDSVVGEDGT 60
          MAN  L    S RER ++TL+ HRNE+++LL R   +GKGILQ H ++ E + +  E  +
Sbjct: 1  MANHPLTHSHSFRERFDETLTGHRNEILALLSRLEAKGKGILQHHQVVAEFEEIPEE--S 58

Query: 61 RLGLRDGPFGEALKSAQ 77
          R  L+ G FGE L+S Q
Sbjct: 59 RKKLQGGVFGEVLRSTQ 75


>Glyma15g20180.1 
          Length = 806

 Score = 66.6 bits (161), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 2/77 (2%)

Query: 1  MANPKLGRIPSMRERVEDTLSAHRNELVSLLCRYVDQGKGILQPHTLIDELDSVVGEDGT 60
          MAN  L    S RER ++TL+ HRNE+++LL R   +GKGILQ H ++ E + +  E  +
Sbjct: 1  MANHPLTHSHSFRERFDETLTGHRNEILALLSRLEAKGKGILQHHQVVAEFEEIPEE--S 58

Query: 61 RLGLRDGPFGEALKSAQ 77
          R  L+ G FGE L+S Q
Sbjct: 59 RKKLQGGVFGEVLRSTQ 75


>Glyma15g20180.3 
          Length = 777

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 2/77 (2%)

Query: 1  MANPKLGRIPSMRERVEDTLSAHRNELVSLLCRYVDQGKGILQPHTLIDELDSVVGEDGT 60
          MAN  L    S RER ++TL+ HRNE+++LL R   +GKGILQ H ++ E + +  E  +
Sbjct: 1  MANHPLTHSHSFRERFDETLTGHRNEILALLSRLEAKGKGILQHHQVVAEFEEIPEE--S 58

Query: 61 RLGLRDGPFGEALKSAQ 77
          R  L+ G FGE L+S Q
Sbjct: 59 RKKLQGGVFGEVLRSTQ 75