Jatropha Genome Database

JcCB0337131.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0337131.10 - phase: 0 /partial
         (255 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g48000.1                                                       255   3e-68
Glyma09g38350.1                                                       247   1e-65

>Glyma18g48000.1 
          Length = 829

 Score =  255 bits (651), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 130/224 (58%), Positives = 169/224 (75%), Gaps = 2/224 (0%)

Query: 1   GVQVDRMETELSVEKARGSPSSKQDSESEEFCKLLQQQKYLNNVTETALRKNQPLIILNL 60
           G QVDRME +  ++ A  SPS K D ESEEFC LL+QQKYLNN+TE ALRKNQPLII NL
Sbjct: 579 GAQVDRMEIDDDIDGADSSPSCKNDIESEEFCALLRQQKYLNNLTEHALRKNQPLIISNL 638

Query: 61  MHEKVPLFVAEDLTGTSKLEWTCLEALRVRKFPGGPSMEISTVDIQAEAREACVSNGKTN 120
           +++K  L    +++GT KLE  CL+AL +   PG   +EI    +Q E +E C+S GK+ 
Sbjct: 639 INDK-DLSSDHNISGTPKLEQMCLQALSMYVIPGISCIEIYVDKMQDEDQEVCLSTGKSG 697

Query: 121 STHVSPAAAIPELDMPIVVSTIQSCSQSINKVVDSLQQKFPTVSKSQLRNKVREISDFVD 180
           ++ +S  A IP+ D+PI+V+TIQSCSQ +NKV+ SLQQKFP+VSKS L+NKVRE+SD+VD
Sbjct: 698 ASPISGVAVIPDSDLPIIVTTIQSCSQGMNKVLVSLQQKFPSVSKSLLKNKVREVSDYVD 757

Query: 181 NRWQVKKEVLNEVGISISPPGKSRGRMPNISTFFSKRCLPPTGK 224
           NR QVKKEVL+++G ++  PGKS G   +I+ FFSKRCLPPTG+
Sbjct: 758 NRLQVKKEVLDKLGSAVK-PGKSSGGPRSIAAFFSKRCLPPTGE 800


>Glyma09g38350.1 
          Length = 844

 Score =  247 bits (630), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 127/224 (56%), Positives = 166/224 (74%), Gaps = 2/224 (0%)

Query: 1   GVQVDRMETELSVEKARGSPSSKQDSESEEFCKLLQQQKYLNNVTETALRKNQPLIILNL 60
           G QVDRM+ +  +E A  SPS K D E EEFC LL+QQKYLNN+TE ALRKNQPLII NL
Sbjct: 595 GAQVDRMQIDDDIEGADSSPSCKNDIEIEEFCALLRQQKYLNNLTEHALRKNQPLIISNL 654

Query: 61  MHEKVPLFVAEDLTGTSKLEWTCLEALRVRKFPGGPSMEISTVDIQAEAREACVSNGKTN 120
           +++K  L    +++GT KLE  CL+ L +   PG   +EIS   +Q E +E C+S GK  
Sbjct: 655 INDK-DLSSDHNISGTPKLEQMCLQVLSMYVIPGISCIEISEDKMQDEDQEVCLSTGKGV 713

Query: 121 STHVSPAAAIPELDMPIVVSTIQSCSQSINKVVDSLQQKFPTVSKSQLRNKVREISDFVD 180
           ++ +S  A IP+ D+PI+V+TIQSCSQ +NKV+ SLQQKFP+VSKS L+NKVRE+SD+VD
Sbjct: 714 ASLISGVAVIPDSDLPIIVTTIQSCSQGMNKVLVSLQQKFPSVSKSLLKNKVREVSDYVD 773

Query: 181 NRWQVKKEVLNEVGISISPPGKSRGRMPNISTFFSKRCLPPTGK 224
           NR QVKKEVL+++G+++ P   S G   +I+ FFSKRCLPPTG+
Sbjct: 774 NRLQVKKEVLDKLGLAVKPEKSSVG-PKSIAAFFSKRCLPPTGE 816