Jatropha Genome Database

JcCB0336621.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0336621.10 - phase: 0 /partial
         (140 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g03960.2                                                       270   4e-73
Glyma14g03960.1                                                       270   4e-73
Glyma02g44780.2                                                       241   2e-64
Glyma02g44780.1                                                       241   2e-64
Glyma04g09780.1                                                       204   3e-53
Glyma06g09860.1                                                       165   2e-41
Glyma08g36430.1                                                       116   6e-27
Glyma14g05770.1                                                        86   1e-17

>Glyma14g03960.2 
          Length = 764

 Score =  270 bits (689), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 129/138 (93%), Positives = 135/138 (97%)

Query: 3   SALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDLYEW 62
           SALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDL EW
Sbjct: 55  SALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDLLEW 114

Query: 63  KTALEHALAQAPSAALVMGHNGIFRSDTNEAIEGSFHQWRDKRPVKSLVVGRPILLALED 122
           KTALE ALAQAPSAALVMGHNGIFRSD +++IEGSFHQWRDKRP+KSLVVGRPILLALED
Sbjct: 115 KTALEQALAQAPSAALVMGHNGIFRSDASDSIEGSFHQWRDKRPIKSLVVGRPILLALED 174

Query: 123 IDGGPSFLEKALRFLEKF 140
           IDGGPSFLEKAL+FLEK+
Sbjct: 175 IDGGPSFLEKALQFLEKY 192


>Glyma14g03960.1 
          Length = 866

 Score =  270 bits (689), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 129/138 (93%), Positives = 135/138 (97%)

Query: 3   SALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDLYEW 62
           SALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDL EW
Sbjct: 57  SALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDLLEW 116

Query: 63  KTALEHALAQAPSAALVMGHNGIFRSDTNEAIEGSFHQWRDKRPVKSLVVGRPILLALED 122
           KTALE ALAQAPSAALVMGHNGIFRSD +++IEGSFHQWRDKRP+KSLVVGRPILLALED
Sbjct: 117 KTALEQALAQAPSAALVMGHNGIFRSDASDSIEGSFHQWRDKRPIKSLVVGRPILLALED 176

Query: 123 IDGGPSFLEKALRFLEKF 140
           IDGGPSFLEKAL+FLEK+
Sbjct: 177 IDGGPSFLEKALQFLEKY 194


>Glyma02g44780.2 
          Length = 859

 Score =  241 bits (614), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 121/138 (87%), Positives = 123/138 (89%), Gaps = 10/138 (7%)

Query: 3   SALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDLYEW 62
           SALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDL EW
Sbjct: 57  SALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDLLEW 116

Query: 63  KTALEHALAQAPSAALVMGHNGIFRSDTNEAIEGSFHQWRDKRPVKSLVVGRPILLALED 122
           KTALE AL QAPSAALVMGHNGIFRSD            RDKRP+KSLVVGRPILLALED
Sbjct: 117 KTALEQALTQAPSAALVMGHNGIFRSDAR----------RDKRPIKSLVVGRPILLALED 166

Query: 123 IDGGPSFLEKALRFLEKF 140
           IDGGPSFLEKALRFLEK+
Sbjct: 167 IDGGPSFLEKALRFLEKY 184


>Glyma02g44780.1 
          Length = 860

 Score =  241 bits (614), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 121/138 (87%), Positives = 123/138 (89%), Gaps = 10/138 (7%)

Query: 3   SALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDLYEW 62
           SALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDL EW
Sbjct: 57  SALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDLLEW 116

Query: 63  KTALEHALAQAPSAALVMGHNGIFRSDTNEAIEGSFHQWRDKRPVKSLVVGRPILLALED 122
           KTALE AL QAPSAALVMGHNGIFRSD            RDKRP+KSLVVGRPILLALED
Sbjct: 117 KTALEQALTQAPSAALVMGHNGIFRSDAR----------RDKRPIKSLVVGRPILLALED 166

Query: 123 IDGGPSFLEKALRFLEKF 140
           IDGGPSFLEKALRFLEK+
Sbjct: 167 IDGGPSFLEKALRFLEKY 184


>Glyma04g09780.1 
          Length = 845

 Score =  204 bits (519), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 100/138 (72%), Positives = 116/138 (84%)

Query: 3   SALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDLYEW 62
           +A+ Q+G EVNLTLGGIDLNNSGSVV++ DKKLLTV FPD  DGRAFTLKAET+EDLYEW
Sbjct: 43  NAVSQKGNEVNLTLGGIDLNNSGSVVIKADKKLLTVQFPDVHDGRAFTLKAETTEDLYEW 102

Query: 63  KTALEHALAQAPSAALVMGHNGIFRSDTNEAIEGSFHQWRDKRPVKSLVVGRPILLALED 122
           KTALE+ALA APSAA V   NGIFR+D  ++I+ S  Q +D+ PVKS VVGRPILLALED
Sbjct: 103 KTALENALALAPSAANVTEQNGIFRNDQTDSIDISLDQLKDREPVKSTVVGRPILLALED 162

Query: 123 IDGGPSFLEKALRFLEKF 140
           +DG PSFLEKAL F+E+ 
Sbjct: 163 VDGTPSFLEKALTFIEEH 180


>Glyma06g09860.1 
          Length = 929

 Score =  165 bits (417), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 92/138 (66%), Positives = 105/138 (76%), Gaps = 17/138 (12%)

Query: 3   SALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDLYEW 62
           +A+PQ+G EVNLTLGGIDLNNSGSVV++ DKKLLTV FPD  DGRAFTLKAET+EDLYEW
Sbjct: 78  NAVPQKGNEVNLTLGGIDLNNSGSVVIKADKKLLTVQFPDVHDGRAFTLKAETTEDLYEW 137

Query: 63  KTALEHALAQAPSAALVMGHNGIFRSDTNEAIEGSFHQWRDKRPVKSLVVGRPILLALED 122
           KTALE+ALA AP+AA V   N                  +D+ PVKS VVGRPILLALED
Sbjct: 138 KTALENALALAPNAANVTEQN-----------------VKDREPVKSTVVGRPILLALED 180

Query: 123 IDGGPSFLEKALRFLEKF 140
           +DG PSFLEKAL F+E+ 
Sbjct: 181 VDGTPSFLEKALTFIEEH 198


>Glyma08g36430.1 
          Length = 200

 Score =  116 bits (291), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 60/84 (71%), Positives = 62/84 (73%), Gaps = 10/84 (11%)

Query: 3  SALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDLYEW 62
          SALP RGGEVNL L  IDLNNSGSVVVREDKK             AFTLKAETSED+ EW
Sbjct: 1  SALPHRGGEVNLILEDIDLNNSGSVVVREDKK----------ACYAFTLKAETSEDMLEW 50

Query: 63 KTALEHALAQAPSAALVMGHNGIF 86
          K  LE ALAQAPS ALVMGHNGI+
Sbjct: 51 KITLEQALAQAPSVALVMGHNGIY 74


>Glyma14g05770.1 
          Length = 84

 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 51/78 (65%), Gaps = 9/78 (11%)

Query: 52  KAETSEDLYEWKTALEHALAQAPSAALVMGHNGIFRSDTNEAIEGSFHQWRDKRPVKSLV 111
           +AETSEDL+EWKT LE ALAQAP A L MG NGIFR+D               +  KS++
Sbjct: 1   QAETSEDLFEWKTTLEQALAQAPGATLFMGRNGIFRNDARGT---------SVQLYKSVI 51

Query: 112 VGRPILLALEDIDGGPSF 129
           V  PILL LEDIDGG SF
Sbjct: 52  VQIPILLVLEDIDGGMSF 69