Jatropha Genome Database

JcCB0334901.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0334901.10 + phase: 0 /pseudo/partial
         (209 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g01240.2                                                       224   4e-59
Glyma07g04650.1                                                       222   2e-58
Glyma16g01240.1                                                       222   2e-58

>Glyma16g01240.2 
          Length = 231

 Score =  224 bits (572), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 107/141 (75%), Positives = 127/141 (90%), Gaps = 3/141 (2%)

Query: 69  LSSAPLLEPVGSRIQDNEVIVDPRKQQLIARLKTGKNFLRNQDPEKALAEFKAALDLAQS 128
           LS AP+    G RI DNE+IVDP+KQ+LI++LK GKNFLRNQ P+KA  EFK AL+LAQ+
Sbjct: 94  LSYAPI---GGGRILDNEIIVDPKKQELISKLKNGKNFLRNQQPDKAFTEFKNALELAQN 150

Query: 129 MKDPIEEKKAARGLGASLQRQGKYQEAIKYHSMVLAISQRVGEDSGNTEAYGAIADCYTE 188
           +KDPIEEKKAARGLGASLQRQGKY++AIKYHSMVL IS+R GEDSG+TEA+GAIADCYTE
Sbjct: 151 LKDPIEEKKAARGLGASLQRQGKYRDAIKYHSMVLGISEREGEDSGSTEAFGAIADCYTE 210

Query: 189 IGDLERAGKFYDQYIARLEKD 209
           +G+LE+AG+FYD+YIARLEKD
Sbjct: 211 LGELEKAGQFYDKYIARLEKD 231


>Glyma07g04650.1 
          Length = 297

 Score =  222 bits (566), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 107/141 (75%), Positives = 128/141 (90%), Gaps = 3/141 (2%)

Query: 69  LSSAPLLEPVGSRIQDNEVIVDPRKQQLIARLKTGKNFLRNQDPEKALAEFKAALDLAQS 128
           LS AP+    G RI DNE+IV+P+KQ+LI++LK GKNFLRNQ P+KA  EFK AL+LAQ+
Sbjct: 160 LSYAPI---GGGRILDNEIIVNPKKQELISKLKNGKNFLRNQRPDKAFTEFKNALELAQN 216

Query: 129 MKDPIEEKKAARGLGASLQRQGKYQEAIKYHSMVLAISQRVGEDSGNTEAYGAIADCYTE 188
           +KDPIEEKKAARGLGASLQRQGKY++AIKYHSMVLAIS+R GEDSG+TEA+GAIADCYTE
Sbjct: 217 LKDPIEEKKAARGLGASLQRQGKYRDAIKYHSMVLAISEREGEDSGSTEAFGAIADCYTE 276

Query: 189 IGDLERAGKFYDQYIARLEKD 209
           +G+LE+AG+FYD+YIARLEKD
Sbjct: 277 LGELEKAGQFYDKYIARLEKD 297


>Glyma16g01240.1 
          Length = 297

 Score =  222 bits (566), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 107/141 (75%), Positives = 127/141 (90%), Gaps = 3/141 (2%)

Query: 69  LSSAPLLEPVGSRIQDNEVIVDPRKQQLIARLKTGKNFLRNQDPEKALAEFKAALDLAQS 128
           LS AP+    G RI DNE+IVDP+KQ+LI++LK GKNFLRNQ P+KA  EFK AL+LAQ+
Sbjct: 160 LSYAPI---GGGRILDNEIIVDPKKQELISKLKNGKNFLRNQQPDKAFTEFKNALELAQN 216

Query: 129 MKDPIEEKKAARGLGASLQRQGKYQEAIKYHSMVLAISQRVGEDSGNTEAYGAIADCYTE 188
           +KDPIEEKKAARGLGASLQRQGKY++AIKYHSMVL IS+R GEDSG+TEA+GAIADCYTE
Sbjct: 217 LKDPIEEKKAARGLGASLQRQGKYRDAIKYHSMVLGISEREGEDSGSTEAFGAIADCYTE 276

Query: 189 IGDLERAGKFYDQYIARLEKD 209
           +G+LE+AG+FYD+YIARLEKD
Sbjct: 277 LGELEKAGQFYDKYIARLEKD 297