Jatropha Genome Database

JcCB0333431.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0333431.10 - phase: 0 /pseudo/partial
         (352 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g38200.1                                                       499   e-141
Glyma15g16270.1                                                       468   e-132
Glyma09g04620.1                                                       466   e-131
Glyma14g19920.1                                                       140   3e-33
Glyma14g21220.1                                                        98   1e-20
Glyma06g25600.1                                                        77   3e-14

>Glyma20g38200.1 
          Length = 1132

 Score =  499 bits (1286), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 234/322 (72%), Positives = 280/322 (86%), Gaps = 2/322 (0%)

Query: 5   QVKEWLHSLGIVDHHVAAVQDEDEPDDGGFPLNQEESVRNRNVPSVAALPIFRPALGGQQ 64
           Q+KEWLH+LGIVD  V  VQD++EPDDG  PL+ E+SV+NR VPSVAAL I RP++GGQQ
Sbjct: 155 QLKEWLHNLGIVDQTVM-VQDDEEPDDGAVPLHHEDSVKNRYVPSVAALSIIRPSIGGQQ 213

Query: 65  AI-DKAKVAMQNYLNHFLGNMDIVNSREVCKFLEVSKLSFSREYGPKLKEGYVMAKHLSN 123
            I D+AKVAMQ YLN FLGN+DIVNS+EVC+FLEVS+LSF +EYGPKLKEGYVM KHLSN
Sbjct: 214 TIADRAKVAMQGYLNRFLGNLDIVNSQEVCRFLEVSRLSFLQEYGPKLKEGYVMVKHLSN 273

Query: 124 ISDNGDIRCCPCSLFDCCSDNWEKVWAVLKPGFLALLEDHFDTKLLDIIVFDILPTSTGS 183
           IS + D+ C PC+ F CC+++W+KVW+VLKPGFLA L+D F+ K LDI++FDILP S G 
Sbjct: 274 ISQDSDVSCFPCNWFHCCNNSWKKVWSVLKPGFLAFLDDPFNNKPLDIMIFDILPYSNGD 333

Query: 184 KGSQVYIANQIKERNPLRYSFKVSSGSKSIKLRTTSSGKVKEWVAAINDAGLRPLEGWCH 243
            G+++++A+ +KERNPLRY+FKV+SG++SI LRTTSS KVK WV AIN+A LRPLEGWC 
Sbjct: 334 GGTKIFLADPVKERNPLRYTFKVTSGNRSILLRTTSSAKVKAWVTAINEASLRPLEGWCC 393

Query: 244 PHRFGSFSPLRGLTDDGSQAQWFVDGQAAFEAIASAIENAKSEIFITGWWLCPELYLRRP 303
           PHRFGSF+P+RGLT+DGSQAQWFVDGQAAFEAIA++I++AKSEIFITGWWLCPELYLRRP
Sbjct: 394 PHRFGSFAPIRGLTEDGSQAQWFVDGQAAFEAIATSIQDAKSEIFITGWWLCPELYLRRP 453

Query: 304 FRSHSISRLDSLLEAKAKQGVQ 325
           F S S SRLDSLLE KA QGVQ
Sbjct: 454 FDSFSTSRLDSLLEEKANQGVQ 475


>Glyma15g16270.1 
          Length = 1123

 Score =  468 bits (1203), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 230/326 (70%), Positives = 267/326 (81%), Gaps = 6/326 (1%)

Query: 5   QVKEWLHSLGIVDHHVAAVQDEDEPDDGGFPLNQEE---SVRNRNVPSVAALPIFRPALG 61
           QVKEWL +LGI +H  A VQD+DE DD   PL+ EE   S ++R+VPS AALPI RPALG
Sbjct: 118 QVKEWLQNLGIGEH-TAMVQDDDEGDDETVPLHTEETHESAKDRDVPSSAALPIIRPALG 176

Query: 62  GQQAI-DKAKVAMQNYLNHFLGNMDIVNSREVCKFLEVSKLSFSREYGPKLKEGYVMAKH 120
            Q +I D+AK AMQ YLNHFLGN+ IVNS EVCKFLEVSKLSFS EYGPKLKE YVM KH
Sbjct: 177 RQHSIADRAKRAMQGYLNHFLGNISIVNSHEVCKFLEVSKLSFSPEYGPKLKEEYVMVKH 236

Query: 121 LSNISDNGDIR-CCPCSLFDCCSDNWEKVWAVLKPGFLALLEDHFDTKLLDIIVFDILPT 179
           L  I  + D R CC    F CC+DNW+KVWAVLKPGFLALL D FDT+ LDIIVFD+LP 
Sbjct: 237 LPKIQKDDDSRKCCLSDCFSCCNDNWQKVWAVLKPGFLALLADPFDTQPLDIIVFDVLPA 296

Query: 180 STGSKGSQVYIANQIKERNPLRYSFKVSSGSKSIKLRTTSSGKVKEWVAAINDAGLRPLE 239
           S G+   ++ +A+++KERNPLR+SFKV+ G +SI++R  SS KVK+WVAAINDAGLRP E
Sbjct: 297 SDGNGDGRLSLASEMKERNPLRHSFKVTCGIRSIRIRVKSSSKVKDWVAAINDAGLRPPE 356

Query: 240 GWCHPHRFGSFSPLRGLTDDGSQAQWFVDGQAAFEAIASAIENAKSEIFITGWWLCPELY 299
           GWCHPHR+GSF+P RGL +DGSQAQWF+DG+AAFEAIAS+IE AKSEIFI GWWLCPELY
Sbjct: 357 GWCHPHRYGSFAPPRGLVEDGSQAQWFIDGRAAFEAIASSIEAAKSEIFICGWWLCPELY 416

Query: 300 LRRPFRSHSISRLDSLLEAKAKQGVQ 325
           LRRPF +H+ SRLD+LLEAKAKQGVQ
Sbjct: 417 LRRPFHTHASSRLDNLLEAKAKQGVQ 442


>Glyma09g04620.1 
          Length = 1126

 Score =  466 bits (1199), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 229/326 (70%), Positives = 266/326 (81%), Gaps = 6/326 (1%)

Query: 5   QVKEWLHSLGIVDHHVAAVQDEDEPDDGGFPLNQEE---SVRNRNVPSVAALPIFRPALG 61
           QVKEWL +LGI +H  A  QD+DE DD   PL+ EE   S ++R+VPS AALPI RPALG
Sbjct: 121 QVKEWLQNLGIGEH-TAMAQDDDEGDDETVPLHTEETHESAKDRDVPSSAALPIIRPALG 179

Query: 62  GQQAI-DKAKVAMQNYLNHFLGNMDIVNSREVCKFLEVSKLSFSREYGPKLKEGYVMAKH 120
            Q +I D+AK AMQ YLNHFLGN+ IVNSREVCKFLEVSKLSFS EYGPKLKE YVM KH
Sbjct: 180 RQHSIADRAKRAMQGYLNHFLGNISIVNSREVCKFLEVSKLSFSPEYGPKLKEEYVMVKH 239

Query: 121 LSNISDNGDIR-CCPCSLFDCCSDNWEKVWAVLKPGFLALLEDHFDTKLLDIIVFDILPT 179
           L  I  + D R CC    F CC+DNW+KVWAVLKPGFLALL D FDT+ LDIIVFD+LP 
Sbjct: 240 LPKIQKDDDSRKCCLSDCFSCCNDNWQKVWAVLKPGFLALLADPFDTQPLDIIVFDVLPA 299

Query: 180 STGSKGSQVYIANQIKERNPLRYSFKVSSGSKSIKLRTTSSGKVKEWVAAINDAGLRPLE 239
           S G+   ++ +A+++KERNPLR+SFKV+ G +SI++R  SS KVK+WVAAINDAGLRP E
Sbjct: 300 SDGNGDGRLSLASEMKERNPLRHSFKVTCGIRSIRIRVKSSSKVKDWVAAINDAGLRPPE 359

Query: 240 GWCHPHRFGSFSPLRGLTDDGSQAQWFVDGQAAFEAIASAIENAKSEIFITGWWLCPELY 299
           GWCHPHR+GSF+P RGL +DGSQAQWF+DG+AAFEAIA +IE AKSEIFI GWWLCPELY
Sbjct: 360 GWCHPHRYGSFAPPRGLVEDGSQAQWFIDGRAAFEAIAFSIEAAKSEIFICGWWLCPELY 419

Query: 300 LRRPFRSHSISRLDSLLEAKAKQGVQ 325
           LRRPF +H+ SRLD+LLEAKAKQGVQ
Sbjct: 420 LRRPFHTHASSRLDNLLEAKAKQGVQ 445


>Glyma14g19920.1 
          Length = 158

 Score =  140 bits (352), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 64/79 (81%), Positives = 71/79 (89%)

Query: 247 FGSFSPLRGLTDDGSQAQWFVDGQAAFEAIASAIENAKSEIFITGWWLCPELYLRRPFRS 306
           FGSF+P+RGLT+D SQAQWFVDGQA FEAIA++I++AK EIFITGWWLCPELYLRRPF S
Sbjct: 1   FGSFAPIRGLTEDRSQAQWFVDGQATFEAIATSIQDAKLEIFITGWWLCPELYLRRPFDS 60

Query: 307 HSISRLDSLLEAKAKQGVQ 325
            S SRLDSLLE KA QGVQ
Sbjct: 61  FSTSRLDSLLEEKANQGVQ 79


>Glyma14g21220.1 
          Length = 384

 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 5/91 (5%)

Query: 5   QVKEWLHSLGIVDHHVAAVQDEDEPDDGGFPLNQE---ESVRNRNVPSVAALPIFRPALG 61
           +VKEWL +LGI +H  A VQD+DE DD    L+ E   ES ++R+VPS AALPI RP LG
Sbjct: 42  KVKEWLQNLGIGEH-TAMVQDDDEGDDEYVSLHTEQTHESGKDRDVPSSAALPIIRPTLG 100

Query: 62  GQQAI-DKAKVAMQNYLNHFLGNMDIVNSRE 91
            Q +I D+AK  MQ YLNHFL N+ IVNSRE
Sbjct: 101 IQHSIADRAKRPMQGYLNHFLENISIVNSRE 131



 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 33/41 (80%)

Query: 249 SFSPLRGLTDDGSQAQWFVDGQAAFEAIASAIENAKSEIFI 289
           S   L GL +DGSQAQWF+DG+A FEAIAS+IE AKSEI I
Sbjct: 218 SVKTLVGLVEDGSQAQWFIDGRATFEAIASSIEIAKSEIEI 258


>Glyma06g25600.1 
          Length = 64

 Score = 77.0 bits (188), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/42 (76%), Positives = 40/42 (95%)

Query: 247 FGSFSPLRGLTDDGSQAQWFVDGQAAFEAIASAIENAKSEIF 288
           FGSF+P+RGLT+DGSQAQWFVDGQA FEAIA++I++AKSE+ 
Sbjct: 1   FGSFAPIRGLTEDGSQAQWFVDGQATFEAIATSIQDAKSEVL 42