Jatropha Genome Database

JcCB0333061.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0333061.10 - phase: 0 /pseudo/partial
         (263 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g34940.1                                                       280   2e-75
Glyma14g02210.1                                                       278   4e-75
Glyma10g32660.2                                                       276   1e-74
Glyma02g46440.1                                                       273   1e-73
Glyma10g32660.1                                                       164   1e-40

>Glyma20g34940.1 
          Length = 424

 Score =  280 bits (715), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 128/172 (74%), Positives = 147/172 (85%)

Query: 90  SISCNYDLSLCANILGRFQWLTCPRKDLSTGWLQCDPGPLFKPEYYSLPGWMSNWFPRKE 149
           S++      + ANI+GR QWLTCPRKDLSTGWL CDPGPLFKPE Y L GW+S+WF  KE
Sbjct: 251 SVTTIISAFMLANIMGRSQWLTCPRKDLSTGWLHCDPGPLFKPESYPLQGWISHWFAWKE 310

Query: 150 ISILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGFTDRMDCQMIM 209
           ISILP+QWH+LCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGG TDRMDCQM+M
Sbjct: 311 ISILPIQWHSLCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVM 370

Query: 210 AVFAYIYHQSFVIPRDYSVEMILDQIMASLTLEEQQILFRKLGQIFQERQLR 261
           AVFAYIYHQSFV+P+  SVEMILDQI+ +LT +EQ+ L+ +LG+I Q+   R
Sbjct: 371 AVFAYIYHQSFVVPQTLSVEMILDQILINLTFDEQEALYWRLGEILQQGITR 422


>Glyma14g02210.1 
          Length = 396

 Score =  278 bits (711), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 128/160 (80%), Positives = 142/160 (88%)

Query: 101 ANILGRFQWLTCPRKDLSTGWLQCDPGPLFKPEYYSLPGWMSNWFPRKEISILPVQWHAL 160
           AN LGRFQWLTCPRKDLSTGWLQCDP P+FKP+Y  LPG +S+W P KEI++LPVQWHAL
Sbjct: 237 ANFLGRFQWLTCPRKDLSTGWLQCDPDPIFKPDYIPLPGLISHWLPWKEIAVLPVQWHAL 296

Query: 161 CLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGFTDRMDCQMIMAVFAYIYHQSF 220
            +GLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGFTDRMDCQM+MAVF YIYHQSF
Sbjct: 297 WMGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGFTDRMDCQMVMAVFVYIYHQSF 356

Query: 221 VIPRDYSVEMILDQIMASLTLEEQQILFRKLGQIFQERQL 260
           V+ +DYSVEM+LDQIM +L  EEQ  L+ KLG+I QER L
Sbjct: 357 VVGQDYSVEMLLDQIMRNLGSEEQLSLYTKLGKILQERHL 396


>Glyma10g32660.2 
          Length = 424

 Score =  276 bits (707), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 129/173 (74%), Positives = 147/173 (84%)

Query: 90  SISCNYDLSLCANILGRFQWLTCPRKDLSTGWLQCDPGPLFKPEYYSLPGWMSNWFPRKE 149
           S++      + ANI+GR QWLTCPRKDLSTGWL CDPGPLFKPE Y LPG +S+WF  KE
Sbjct: 251 SVTTIISAFMLANIMGRSQWLTCPRKDLSTGWLHCDPGPLFKPESYPLPGCISHWFSWKE 310

Query: 150 ISILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGFTDRMDCQMIM 209
           ISILP+QWH+LCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGG TDRMDCQM+M
Sbjct: 311 ISILPIQWHSLCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVM 370

Query: 210 AVFAYIYHQSFVIPRDYSVEMILDQIMASLTLEEQQILFRKLGQIFQERQLRL 262
           AVFAYIYHQSFV+P+  SVEMILDQI  +LT +EQQ L+ +LG+I Q+   R+
Sbjct: 371 AVFAYIYHQSFVVPQTLSVEMILDQISMNLTFDEQQALYWRLGEILQQGFARM 423


>Glyma02g46440.1 
          Length = 407

 Score =  273 bits (698), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 126/160 (78%), Positives = 141/160 (88%)

Query: 101 ANILGRFQWLTCPRKDLSTGWLQCDPGPLFKPEYYSLPGWMSNWFPRKEISILPVQWHAL 160
           AN LGRFQWLTCPRKDL+TGWLQCDP P+FKP+Y  LPG +S+W P KEI++LPVQW AL
Sbjct: 248 ANFLGRFQWLTCPRKDLATGWLQCDPDPIFKPDYIPLPGLISHWLPWKEIAVLPVQWDAL 307

Query: 161 CLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGFTDRMDCQMIMAVFAYIYHQSF 220
            +GLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGFTDRMDCQM+MAVF YIYHQSF
Sbjct: 308 WMGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGFTDRMDCQMVMAVFVYIYHQSF 367

Query: 221 VIPRDYSVEMILDQIMASLTLEEQQILFRKLGQIFQERQL 260
           V+ +DYSVE +LDQIM +L  EEQ  L+ KLGQI QER+L
Sbjct: 368 VVGQDYSVETLLDQIMRNLGSEEQLSLYTKLGQILQERRL 407


>Glyma10g32660.1 
          Length = 424

 Score =  164 bits (414), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 76/98 (77%), Positives = 84/98 (85%)

Query: 90  SISCNYDLSLCANILGRFQWLTCPRKDLSTGWLQCDPGPLFKPEYYSLPGWMSNWFPRKE 149
           S++      + ANI+GR QWLTCPRKDLSTGWL CDPGPLFKPE Y LPG +S+WF  KE
Sbjct: 251 SVTTIISAFMLANIMGRSQWLTCPRKDLSTGWLHCDPGPLFKPESYPLPGCISHWFSWKE 310

Query: 150 ISILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIK 187
           ISILP+QWH+LCLGLFASIIAPFGGFFASGFKRAFKIK
Sbjct: 311 ISILPIQWHSLCLGLFASIIAPFGGFFASGFKRAFKIK 348