Jatropha Genome Database

JcCB0332771.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0332771.10 + phase: 0 /partial
         (204 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g18250.1                                                       323   6e-89
Glyma05g21280.1                                                       323   7e-89
Glyma08g07710.1                                                        68   5e-12
Glyma08g07710.2                                                        68   6e-12
Glyma04g05900.2                                                        68   6e-12
Glyma04g05900.1                                                        68   8e-12
Glyma06g05890.1                                                        67   1e-11
Glyma05g24520.1                                                        63   2e-10
Glyma13g00630.1                                                        56   2e-08
Glyma19g32190.1                                                        52   3e-07
Glyma08g01680.1                                                        52   4e-07
Glyma17g06800.1                                                        52   4e-07
Glyma01g42790.1                                                        48   7e-06
Glyma03g21650.1                                                        48   8e-06

>Glyma17g18250.1 
          Length = 711

 Score =  323 bits (829), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 159/204 (77%), Positives = 173/204 (84%)

Query: 1   IYRALGLMVAASPCXXXXXXXXXXXXISSCARKGILLKGGQVLDALASCHTIAFDKTGTL 60
           IYRALGLMVAASPC            ISSCARKGILLKGG VLDALASCHTIAFDKTGTL
Sbjct: 285 IYRALGLMVAASPCALAVAPLAYAIAISSCARKGILLKGGHVLDALASCHTIAFDKTGTL 344

Query: 61  TTGGLMFKAIEPIYGHKVGKKHADVTSCCTPNCEKEALAVAAAMEKGTTHPIGRAVVDHS 120
           TTGGL+FKAIEPIYGH V    ++V SCC P CEKEALAVA+AMEKGTTHPIGRAVVDHS
Sbjct: 345 TTGGLVFKAIEPIYGHHVRNNESNVPSCCIPTCEKEALAVASAMEKGTTHPIGRAVVDHS 404

Query: 121 IGKDLPCVSVENFEYFPGRGLTATLNNMESGAGSIKLLKASLGSVEFITSRCKSEAESRK 180
            GKDLP VSVE+FEYFPGRGLTAT+N++ESG G  KLLKASLGS++FITS C+SE ES K
Sbjct: 405 EGKDLPSVSVESFEYFPGRGLTATVNSIESGTGGAKLLKASLGSIDFITSLCQSEDESEK 464

Query: 181 IKEAVNASSYGSDLVHAALSVDEK 204
           IKEAVN SSYGS+ VHAALSV++K
Sbjct: 465 IKEAVNTSSYGSEYVHAALSVNQK 488


>Glyma05g21280.1 
          Length = 711

 Score =  323 bits (828), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 157/204 (76%), Positives = 173/204 (84%)

Query: 1   IYRALGLMVAASPCXXXXXXXXXXXXISSCARKGILLKGGQVLDALASCHTIAFDKTGTL 60
           IYRALGLMVAASPC            ISSCARKGILLKGG VLDALA+CHT+AFDKTGTL
Sbjct: 284 IYRALGLMVAASPCALAVAPLAYAIAISSCARKGILLKGGHVLDALATCHTVAFDKTGTL 343

Query: 61  TTGGLMFKAIEPIYGHKVGKKHADVTSCCTPNCEKEALAVAAAMEKGTTHPIGRAVVDHS 120
           TTGGL+FKAIEPIYGH V    ++V SCC P CEKEALAVAAAMEKGTTHPIGRAVVDHS
Sbjct: 344 TTGGLVFKAIEPIYGHHVRNNKSNVPSCCIPTCEKEALAVAAAMEKGTTHPIGRAVVDHS 403

Query: 121 IGKDLPCVSVENFEYFPGRGLTATLNNMESGAGSIKLLKASLGSVEFITSRCKSEAESRK 180
            GKDLP +SVE+FEYFPGRGLTAT+N++ESG G  KLLKASLGS++FITS C+SE ES K
Sbjct: 404 EGKDLPSISVESFEYFPGRGLTATVNSIESGTGGAKLLKASLGSIDFITSFCQSEVESEK 463

Query: 181 IKEAVNASSYGSDLVHAALSVDEK 204
           IKEAVN SSYGS+ VHAALSV++K
Sbjct: 464 IKEAVNTSSYGSEYVHAALSVNQK 487


>Glyma08g07710.1 
          Length = 937

 Score = 68.2 bits (165), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 46/200 (23%)

Query: 7   LMVAASPCXXXXXXXXXXXXISSC-ARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGL 65
           ++V A PC             +S  A++G+LL+GG +L+  A   T+ FDKTGTLT G  
Sbjct: 536 VLVVACPCALGLATPTAVLVGTSLGAKRGLLLRGGNILEKFAMVDTVVFDKTGTLTVG-- 593

Query: 66  MFKAIEPIYGHKVGKKHADVTSCCTPNCEK---------------EALAVAAAMEKGTTH 110
                 P+           VT+   P C K               E L +AAA+E  + H
Sbjct: 594 -----RPV-----------VTNIVIPICIKNAISSQTEENALSDVEVLRLAAAVETNSVH 637

Query: 111 PIGRAVVDHSIGKDLPCVSVENFEYF--PGRGLTATLNNMESGAGSIKLLKASLGSVEFI 168
           P+G+A+VD +   +     V++  +   PG G  AT+ +           K S+G++E+I
Sbjct: 638 PVGKAIVDAAQAANCHNAKVKDGTFLEEPGSGAVATIYDK----------KVSVGTLEWI 687

Query: 169 TSRCKSEAESRKIKEAVNAS 188
           T      +  ++++++ N S
Sbjct: 688 TRHGVINSIHQEVEKSNNQS 707


>Glyma08g07710.2 
          Length = 850

 Score = 68.2 bits (165), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 46/200 (23%)

Query: 7   LMVAASPCXXXXXXXXXXXXISSC-ARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGL 65
           ++V A PC             +S  A++G+LL+GG +L+  A   T+ FDKTGTLT G  
Sbjct: 536 VLVVACPCALGLATPTAVLVGTSLGAKRGLLLRGGNILEKFAMVDTVVFDKTGTLTVG-- 593

Query: 66  MFKAIEPIYGHKVGKKHADVTSCCTPNCEK---------------EALAVAAAMEKGTTH 110
                 P+           VT+   P C K               E L +AAA+E  + H
Sbjct: 594 -----RPV-----------VTNIVIPICIKNAISSQTEENALSDVEVLRLAAAVETNSVH 637

Query: 111 PIGRAVVDHSIGKDLPCVSVENFEYF--PGRGLTATLNNMESGAGSIKLLKASLGSVEFI 168
           P+G+A+VD +   +     V++  +   PG G  AT+ +           K S+G++E+I
Sbjct: 638 PVGKAIVDAAQAANCHNAKVKDGTFLEEPGSGAVATIYDK----------KVSVGTLEWI 687

Query: 169 TSRCKSEAESRKIKEAVNAS 188
           T      +  ++++++ N S
Sbjct: 688 TRHGVINSIHQEVEKSNNQS 707


>Glyma04g05900.2 
          Length = 492

 Score = 68.2 bits (165), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 76/157 (48%), Gaps = 24/157 (15%)

Query: 6   GLMVAASPCXXXXXXXXXXXXISSC-ARKGILLKGGQVLDALASCHTIAFDKTGTLTTGG 64
            L+V + PC             +S  ARKG+L++GG VL+ LA  H IA DKTGTLT G 
Sbjct: 295 NLLVVSCPCALGLATPTAILVGTSLGARKGLLIRGGDVLERLAGIHYIALDKTGTLTKGK 354

Query: 65  LMFKAIEPI-YGHKVGKKHADVTSCCTPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGK 123
            +  AI  I YG                  E E L +AAA+EK  +HPI +A+V+ +   
Sbjct: 355 PVVSAISSILYG------------------ESEILRLAAAVEKTASHPIAKAIVNKAESL 396

Query: 124 DL--PCVSVENFEYFPGRGLTATLNNMESGAGSIKLL 158
           +L  P    +  E  PG G  A ++      GS++ +
Sbjct: 397 ELIFPVTKGQLVE--PGFGTLAEVDGHLIAVGSLEWV 431


>Glyma04g05900.1 
          Length = 777

 Score = 67.8 bits (164), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 68/131 (51%), Gaps = 23/131 (17%)

Query: 31  ARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPI-YGHKVGKKHADVTSCC 89
           ARKG+L++GG VL+ LA  H IA DKTGTLT G  +  AI  I YG              
Sbjct: 414 ARKGLLIRGGDVLERLAGIHYIALDKTGTLTKGKPVVSAISSILYG-------------- 459

Query: 90  TPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDL--PCVSVENFEYFPGRGLTATLNN 147
               E E L +AAA+EK  +HPI +A+V+ +   +L  P    +  E  PG G  A ++ 
Sbjct: 460 ----ESEILRLAAAVEKTASHPIAKAIVNKAESLELIFPVTKGQLVE--PGFGTLAEVDG 513

Query: 148 MESGAGSIKLL 158
                GS++ +
Sbjct: 514 HLIAVGSLEWV 524


>Glyma06g05890.1 
          Length = 903

 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 80/160 (50%), Gaps = 33/160 (20%)

Query: 31  ARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPI-YGHKVGKKHADVTSCC 89
           ARKG+L++GG VL+ LA  + IA DKTGTLT G  +  AI  I YG              
Sbjct: 527 ARKGLLIRGGDVLERLAGINYIALDKTGTLTKGKPVVSAISSILYG-------------- 572

Query: 90  TPNCEKEALAVAAAMEKGTTHPIGRAVVD--HSIGKDLPCVSVENFEYFPGRGLTATLNN 147
               E E L +AAA+EK  +HPI +A+V+   S+   LP    +  E  PG G  A ++ 
Sbjct: 573 ----ESEILRLAAAVEKTASHPIAKAIVNKAESLELVLPVTKGQLVE--PGFGTLAEVD- 625

Query: 148 MESGAGSIKLLKASLGSVEFITSRCKSEAESRKIKEAVNA 187
                G +     ++GS+E++  R ++ A    +    N+
Sbjct: 626 -----GHL----IAVGSLEWVHERFQTRANPSDLTNLENS 656


>Glyma05g24520.1 
          Length = 665

 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 35/207 (16%)

Query: 7   LMVAASPCXXXXXXXXXXXXISSC-ARKGILLKGGQVLDALASCHTIAFDKTGTLTTG-- 63
           ++V A PC             +S  A++G+LL+GG +L+  A  +TI FDKTGTLT G  
Sbjct: 234 VLVVACPCALGLATPTAVLVGTSLGAKRGLLLRGGNILEKFAMVNTIVFDKTGTLTVGRP 293

Query: 64  -------------GLMFKAIEPIYGHKVGKKHADVTSCCTP-------NCEKEALAVAAA 103
                         +  + +E  +G  +  ++  V     P             L +AAA
Sbjct: 294 VVTNIVIPTCIKNAISRRMLECGFGPNLTVQNRLVRCRLFPTYILYLGTIFSRFLRLAAA 353

Query: 104 MEKGTTHPIGRAVVDHSIGKDLPCVSVENFEYF--PGRGLTATLNNMESGAGSIKLLKAS 161
           +E  + HP+G+A+V+ +   +     V++  +   PG G  AT++N           K S
Sbjct: 354 VESNSVHPVGQAIVNAAQAANCHDAKVKDGTFLEEPGSGAVATIDNK----------KVS 403

Query: 162 LGSVEFITSRCKSEAESRKIKEAVNAS 188
           +G++E+IT      +  ++++++ N S
Sbjct: 404 VGTLEWITRHGVINSIHQEVEKSNNQS 430


>Glyma13g00630.1 
          Length = 804

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 20/145 (13%)

Query: 1   IYRALGLMVAASPCXXXXXXXXXXX-XISSCARKGILLKGGQVLDALASCHTIAFDKTGT 59
           ++ AL ++V+A PC              S  A  G+L+KGG  L+ LA    +AFDKTGT
Sbjct: 338 LHFALVVLVSACPCALILSTPVATFCAYSKAATSGLLIKGGDHLETLAKIKVMAFDKTGT 397

Query: 60  LTTGGLMFKAIEPIYGHKVGKKHADVTSCCTPNCEKEALAV-AAAMEKGTTHPIGRAVVD 118
           +T G  +    + +                + + +   LA   +++E  ++HP+  A+VD
Sbjct: 398 ITKGEFVVTHFQSL----------------SDDIDLNTLAYWVSSIESKSSHPLAAAIVD 441

Query: 119 H--SIGKDLPCVSVENFEYFPGRGL 141
           +  S+  +     V  FE FPG G+
Sbjct: 442 YGRSLSVEPEPEKVTEFENFPGEGI 466


>Glyma19g32190.1 
          Length = 938

 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 21/160 (13%)

Query: 5   LGLMVAASPCXXXXXXXXXXXXISSC-ARKGILLKGGQVLDALASCHTIAFDKTGTLTTG 63
           + +MV A PC             +   A +GIL+KGGQ L+     + + FDKTGTLT  
Sbjct: 556 ISVMVIACPCALGLATPTAVMVGTGVGASQGILIKGGQALENTHKVNCVVFDKTGTLT-- 613

Query: 64  GLMFKAIEPIYGHKVGKKHADVTSCCTPNCEKEALAVAAAMEKGTTHPIGRAVVDHS--I 121
                         +GK     T   T    +E   + AA E  + HP+ +A+V+++  +
Sbjct: 614 --------------IGKPVVVNTKLLTNMVLREFYELVAAAEVNSEHPLAKAIVEYAKKL 659

Query: 122 GKDLPCVSVE--NFEYFPGRGLTATLNNMESGAGSIKLLK 159
             D   +  E  +F    G G+ A + N E   G+  L++
Sbjct: 660 RDDENPIWPEARDFVSIAGHGVKAMVRNKEILVGNKSLME 699


>Glyma08g01680.1 
          Length = 860

 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 21/160 (13%)

Query: 5   LGLMVAASPCXXXXXXXXXXXXISSC-ARKGILLKGGQVLDALASCHTIAFDKTGTLTTG 63
           + +MV A PC             +   A +GIL+KGGQ L+     + + FDKTGTLT G
Sbjct: 478 ISVMVIACPCALGLATPTAVMVGTGVGASQGILIKGGQALENAHKVNCVVFDKTGTLTIG 537

Query: 64  GLMFKAIEPIYGHKVGKKHADVTSCCTPNCEKEALAVAAAMEKGTTHPIGRAVVDHS--I 121
                  +P+  +         T   T    +E   + AA E  + HP+ +A+V+++  +
Sbjct: 538 -------KPVVVN---------TKLLTNMVLREFYELVAAAEVNSEHPLAKAIVEYAKKL 581

Query: 122 GKDLPCVSVE--NFEYFPGRGLTATLNNMESGAGSIKLLK 159
             D   +  E  +F    G G+ A + N E   G+  L++
Sbjct: 582 RDDENPIWPEARDFVSIAGHGVKAMVRNKEILVGNKSLME 621


>Glyma17g06800.1 
          Length = 809

 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 20/142 (14%)

Query: 4   ALGLMVAASPCXXXXXXXXXXX-XISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTT 62
           +L ++V+A PC              +  A  G+L+KGG  L+ LA    +AFDKTGT+T 
Sbjct: 341 SLVVLVSACPCALILSTPVATFCAYTKAATSGLLIKGGDHLETLAKIKVMAFDKTGTITK 400

Query: 63  GGLMFKAIEPIYGHKVGKKHADVTSCCTPNCEKEALAV-AAAMEKGTTHPIGRAVVDH-- 119
           G  +    + +                + + +   LA   +++E  ++HP   A+VD+  
Sbjct: 401 GEFVVTHFQSL----------------SDDIDFNTLAYWVSSIESKSSHPSAAAIVDYGR 444

Query: 120 SIGKDLPCVSVENFEYFPGRGL 141
           S+  +     V  FE FPG G+
Sbjct: 445 SLSVEPEPEKVTEFEIFPGEGI 466


>Glyma01g42790.1 
          Length = 771

 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 22/160 (13%)

Query: 5   LGLMVAASPCXXXXXXXXXXXXISSC-ARKGILLKGGQVLDALASCHTIAFDKTGTLTTG 63
           + +MV A PC             +   A +G+L+KGGQ L++      I FDKTGTLT  
Sbjct: 591 ISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVDCIVFDKTGTLT-- 648

Query: 64  GLMFKAIEPIYGHKVGKKHADVTSCCTPNCEKEALA-VAAAMEKGTTHPIGRAVVDHSIG 122
                         VGK     T   T    +E    VAA  E  + HP+ +AVV+++  
Sbjct: 649 --------------VGKPVIVRTELLTKMVLQEFYELVAAGEEVNSEHPLAKAVVEYAKR 694

Query: 123 ----KDLPCVSVENFEYFPGRGLTATLNNMESGAGSIKLL 158
               ++       +F    G G+ A+++N E   G+  L 
Sbjct: 695 FRDEENPSWPEARDFVSITGHGVKASVHNKEIIVGNKSLF 734


>Glyma03g21650.1 
          Length = 936

 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 69/167 (41%), Gaps = 28/167 (16%)

Query: 4   ALGLMVAASPCXXXXXXXXXXXXISSC-ARKGILLKGGQVLDALASCHTIAFDKTGTLTT 62
           A+ ++V A PC             S   A +G+L+KGG  L+       + FDKTGTLT 
Sbjct: 558 AISVLVVACPCALGLATPTAVMVASGMGASQGVLIKGGDALEKAHKVKIVVFDKTGTLT- 616

Query: 63  GGLMFKAIEPIYGHKVGKKHADVTSCCTPNCEKEALAVAAAMEKGTTHPIGRAVVDH--- 119
                          VGK         +    +E   +  A+E  + HPI +AV  H   
Sbjct: 617 ---------------VGKPEVVSAVLFSEFSMEELCDMTIAVEASSEHPIAKAVAAHAKR 661

Query: 120 ------SIGKDLPCVSVENFEYFPGRGLTATLNNMESGAGSIKLLKA 160
                 S  +++P   V++FE   G G++  + +     G+ +L+ A
Sbjct: 662 LRQKFGSCTEEVP--DVDDFEVHMGAGVSGKVGDRTVVVGNRRLMHA 706