Jatropha Genome Database

JcCB0331671.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0331671.10 - phase: 0 /partial
         (94 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g03210.2                                                       167   2e-42
Glyma08g03210.1                                                       167   3e-42
Glyma06g10540.1                                                        91   4e-19
Glyma05g36370.1                                                        72   2e-13
Glyma19g33620.1                                                        64   3e-11
Glyma03g30770.1                                                        64   4e-11

>Glyma08g03210.2 
          Length = 630

 Score =  167 bits (423), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 77/91 (84%), Positives = 82/91 (90%)

Query: 4   NETSCGNTFNCNHPIVRQFILDCLRYWVIEMHVDGFRFDLASIMTRGSSLWDAVNVFGNP 63
           N + CGNTFNCNHP+VRQFI+DCLRYWV EMHVDGFRFDLASIMTR SSLWD  NVFG P
Sbjct: 344 NYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRSSSLWDGANVFGAP 403

Query: 64  VEGDLLTTGTPLSSPPLIDMISNDPILREVK 94
           +EGDLLTTGTPLSSPPLID+ISNDPIL  VK
Sbjct: 404 IEGDLLTTGTPLSSPPLIDLISNDPILCGVK 434


>Glyma08g03210.1 
          Length = 756

 Score =  167 bits (422), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 77/91 (84%), Positives = 82/91 (90%)

Query: 4   NETSCGNTFNCNHPIVRQFILDCLRYWVIEMHVDGFRFDLASIMTRGSSLWDAVNVFGNP 63
           N + CGNTFNCNHP+VRQFI+DCLRYWV EMHVDGFRFDLASIMTR SSLWD  NVFG P
Sbjct: 344 NYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRSSSLWDGANVFGAP 403

Query: 64  VEGDLLTTGTPLSSPPLIDMISNDPILREVK 94
           +EGDLLTTGTPLSSPPLID+ISNDPIL  VK
Sbjct: 404 IEGDLLTTGTPLSSPPLIDLISNDPILCGVK 434


>Glyma06g10540.1 
          Length = 685

 Score = 90.5 bits (223), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 44/92 (47%), Positives = 55/92 (59%), Gaps = 19/92 (20%)

Query: 3   LNETSCGNTFNCNHPIVRQFILDCLRYWVIEMHVDGFRFDLASIMTRGSSLWDAVNVFGN 62
           LN + CGNT NCNHP+V + ILD LR+WV E HVDGFRFDLAS++ RG            
Sbjct: 319 LNFSGCGNTLNCNHPVVMELILDSLRHWVTEYHVDGFRFDLASVLCRG------------ 366

Query: 63  PVEGDLLTTGTPLSSPPLIDMISNDPILREVK 94
                    G+PL++PPLI  I+ D +L   K
Sbjct: 367 -------IDGSPLNAPPLIRAIAKDAVLSRCK 391


>Glyma05g36370.1 
          Length = 399

 Score = 71.6 bits (174), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 33/42 (78%), Positives = 35/42 (83%)

Query: 53 LWDAVNVFGNPVEGDLLTTGTPLSSPPLIDMISNDPILREVK 94
          LWD  N FG P+EGDLLTTG PLSSPPLID+ISNDPIL  VK
Sbjct: 1  LWDGANAFGAPIEGDLLTTGAPLSSPPLIDLISNDPILCGVK 42


>Glyma19g33620.1 
          Length = 671

 Score = 64.3 bits (155), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 19/85 (22%)

Query: 10  NTFNCNHPIVRQFILDCLRYWVIEMHVDGFRFDLASIMTRGSSLWDAVNVFGNPVEGDLL 69
           +  NCN+PIV+  ILD LR+WV E H+DGF F  AS + RG                   
Sbjct: 295 SALNCNYPIVQNLILDSLRHWVTEFHIDGFSFINASHLLRG------------------- 335

Query: 70  TTGTPLSSPPLIDMISNDPILREVK 94
             G  LS PPL++ I+ DP+L + K
Sbjct: 336 FHGEYLSRPPLVEAIAFDPVLSKTK 360


>Glyma03g30770.1 
          Length = 598

 Score = 63.9 bits (154), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 19/85 (22%)

Query: 10  NTFNCNHPIVRQFILDCLRYWVIEMHVDGFRFDLASIMTRGSSLWDAVNVFGNPVEGDLL 69
           +  NCN+PIV+  ILD LR+WV E H+DGF F  AS + RG                   
Sbjct: 236 SALNCNYPIVQSLILDSLRHWVTEFHIDGFSFLNASHLLRG------------------- 276

Query: 70  TTGTPLSSPPLIDMISNDPILREVK 94
             G  L+ PPL++ I+ DP+L + K
Sbjct: 277 FHGEYLTRPPLVEAIAFDPVLSKTK 301