Jatropha Genome Database

JcCB0329631.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0329631.10 + phase: 2 /pseudo/partial
         (249 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g46290.1                                                       259   2e-69
Glyma05g26170.1                                                       250   1e-66
Glyma14g02430.1                                                       249   1e-66
Glyma08g09100.1                                                       246   2e-65

>Glyma02g46290.1 
          Length = 391

 Score =  259 bits (662), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 121/139 (87%), Positives = 133/139 (95%)

Query: 111 SIQLSLAKYQDVKIYFVSPEVVKMKDDIKDYLTSKGVTWEESADLIEVASKCDVVYQTRI 170
           S+   LAKYQDVKIYFVSP VVKMKDDIKDYLTSKGV WEESADL+EVASKC+VVYQTRI
Sbjct: 253 SLAYLLAKYQDVKIYFVSPNVVKMKDDIKDYLTSKGVEWEESADLMEVASKCNVVYQTRI 312

Query: 171 QRERFGERIDLYEEARGKYIVDRDVLNVMQKHAVVMHPLPRLDEITIDVDADPRGAYFRQ 230
           Q+ERFGE+I+LYEEARGKYIV++DVLNVMQKHAVVMHPLPRLDEIT+DVD+DPR AYFRQ
Sbjct: 313 QKERFGEKIELYEEARGKYIVNQDVLNVMQKHAVVMHPLPRLDEITVDVDSDPRAAYFRQ 372

Query: 231 AKNGLYIRMALLKLLLVGW 249
           AKNGLYIRMALLK+LL+GW
Sbjct: 373 AKNGLYIRMALLKVLLLGW 391


>Glyma05g26170.1 
          Length = 398

 Score =  250 bits (638), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 117/139 (84%), Positives = 132/139 (94%)

Query: 111 SIQLSLAKYQDVKIYFVSPEVVKMKDDIKDYLTSKGVTWEESADLIEVASKCDVVYQTRI 170
           S+   LAK++DVKIYFVSP+VVKMKDDIKDYLTSKGV WEES+DL+EVAS+CDVVYQTRI
Sbjct: 260 SLAYLLAKFKDVKIYFVSPDVVKMKDDIKDYLTSKGVEWEESSDLVEVASECDVVYQTRI 319

Query: 171 QRERFGERIDLYEEARGKYIVDRDVLNVMQKHAVVMHPLPRLDEITIDVDADPRGAYFRQ 230
           Q+ERFGERIDLYE+ARGKY+V++ +LNVMQ+HAVVMHPLPRLDEIT+DVDADPR AYFRQ
Sbjct: 320 QKERFGERIDLYEKARGKYVVNQGILNVMQRHAVVMHPLPRLDEITVDVDADPRAAYFRQ 379

Query: 231 AKNGLYIRMALLKLLLVGW 249
           AK GLYIRMALLKLLLVGW
Sbjct: 380 AKYGLYIRMALLKLLLVGW 398


>Glyma14g02430.1 
          Length = 391

 Score =  249 bits (637), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 118/139 (84%), Positives = 130/139 (93%)

Query: 111 SIQLSLAKYQDVKIYFVSPEVVKMKDDIKDYLTSKGVTWEESADLIEVASKCDVVYQTRI 170
           S+   LAKYQDVKIYFVSP VVKMKDDIKDYLTSKGV WEESADL+EVASKCDVVYQTRI
Sbjct: 253 SLAYLLAKYQDVKIYFVSPNVVKMKDDIKDYLTSKGVEWEESADLLEVASKCDVVYQTRI 312

Query: 171 QRERFGERIDLYEEARGKYIVDRDVLNVMQKHAVVMHPLPRLDEITIDVDADPRGAYFRQ 230
           Q+ERF E+I+LYEEARGKYIV++DVL+ MQKHAVVMHPLPRLDEIT++VD DPR AYFRQ
Sbjct: 313 QKERFREKIELYEEARGKYIVNQDVLDAMQKHAVVMHPLPRLDEITVEVDRDPRAAYFRQ 372

Query: 231 AKNGLYIRMALLKLLLVGW 249
           AKNGLYIRMALLK+LL+GW
Sbjct: 373 AKNGLYIRMALLKVLLLGW 391


>Glyma08g09100.1 
          Length = 398

 Score =  246 bits (628), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 116/139 (83%), Positives = 131/139 (94%)

Query: 111 SIQLSLAKYQDVKIYFVSPEVVKMKDDIKDYLTSKGVTWEESADLIEVASKCDVVYQTRI 170
           S+   LAK++DVKIYFVSP+VVKMKDDIKDYLTSKGV WEE ADL+EVAS+CDVVYQTRI
Sbjct: 260 SLAYLLAKFKDVKIYFVSPDVVKMKDDIKDYLTSKGVEWEECADLVEVASECDVVYQTRI 319

Query: 171 QRERFGERIDLYEEARGKYIVDRDVLNVMQKHAVVMHPLPRLDEITIDVDADPRGAYFRQ 230
           Q+ERFGE+IDLYE+ARGKYIV++ +LNVMQ+HAVVMHPLPRLDEIT++VDADPR AYFRQ
Sbjct: 320 QKERFGEKIDLYEKARGKYIVNQGILNVMQRHAVVMHPLPRLDEITLEVDADPRAAYFRQ 379

Query: 231 AKNGLYIRMALLKLLLVGW 249
           AK GLYIRMALLKLLLVGW
Sbjct: 380 AKYGLYIRMALLKLLLVGW 398