Jatropha Genome Database

JcCB0320341.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0320341.10 + phase: 0 
         (77 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g36360.1                                                        91   2e-19
Glyma11g09080.1                                                        90   7e-19

>Glyma01g36360.1 
          Length = 326

 Score = 91.3 bits (225), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/65 (69%), Positives = 54/65 (83%)

Query: 12  EEAERQKQENENAAMAVAKRQKMLEKEKETIERKPFIEIQSETKRFRQDVFKRRHRARAL 71
           EE + Q+ E+  AA+AVAKRQ+MLE EKE IE+KPF++IQSETKRFRQDVFKRRHRARA+
Sbjct: 257 EEVKSQELEDREAALAVAKRQRMLESEKENIEKKPFMDIQSETKRFRQDVFKRRHRARAV 316

Query: 72  RNQGS 76
               S
Sbjct: 317 GKHNS 321


>Glyma11g09080.1 
          Length = 301

 Score = 89.7 bits (221), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 45/65 (69%), Positives = 54/65 (83%)

Query: 12  EEAERQKQENENAAMAVAKRQKMLEKEKETIERKPFIEIQSETKRFRQDVFKRRHRARAL 71
           EEA+ Q+ E+  AAMAVAKRQ+MLE EKE IE+KPF++I+ ETKRFRQDVFKRRHRARA+
Sbjct: 232 EEAKNQELEDREAAMAVAKRQRMLESEKENIEKKPFMDIKIETKRFRQDVFKRRHRARAV 291

Query: 72  RNQGS 76
               S
Sbjct: 292 EKHNS 296