Jatropha Genome Database
- JcCB0319311.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0319311.20 + phase: 0
(60 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma02g48060.1 72 1e-13
Glyma07g19210.1 70 4e-13
Glyma14g00510.1 70 7e-13
Glyma18g43740.1 69 1e-12
Glyma13g41460.1 62 1e-10
Glyma13g41460.2 62 1e-10
Glyma15g03930.1 62 1e-10
Glyma12g36610.1 60 6e-10
Glyma13g27300.1 58 3e-09
Glyma10g21860.1 57 3e-09
Glyma02g31370.1 57 3e-09
Glyma15g43020.1 54 3e-08
Glyma09g15550.1 53 8e-08
Glyma12g36620.1 52 2e-07
Glyma04g14480.1 47 6e-06
>Glyma02g48060.1
Length = 424
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 43/52 (82%)
Query: 1 MYLGSGIFLNMMGISSASPMRIPAERFLKLRAIGAPAVVLYLAIQGIFRGLR 52
+YLGSG FL+++G+S+ +P +PA FL LRA+GAPAVVL L++QGIFRG +
Sbjct: 109 LYLGSGAFLHLIGVSTQNPTYVPARHFLSLRAVGAPAVVLSLSLQGIFRGFK 160
>Glyma07g19210.1
Length = 616
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%)
Query: 1 MYLGSGIFLNMMGISSASPMRIPAERFLKLRAIGAPAVVLYLAIQGIFRGL 51
+ LGSGI +N+MGI + SPMR PAE+FL LRA GAPA+VL LA QG FRG
Sbjct: 236 LTLGSGILMNIMGIPADSPMRGPAEQFLTLRAFGAPAIVLALAAQGTFRGF 286
>Glyma14g00510.1
Length = 450
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 42/52 (80%)
Query: 1 MYLGSGIFLNMMGISSASPMRIPAERFLKLRAIGAPAVVLYLAIQGIFRGLR 52
+YLG+G FL+++G+ + +P +PA FL LRA+GAPAVVL LA+QGIFRG +
Sbjct: 83 LYLGAGAFLHLIGVPTQNPTYVPARHFLSLRAVGAPAVVLSLALQGIFRGFK 134
>Glyma18g43740.1
Length = 562
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 39/51 (76%)
Query: 1 MYLGSGIFLNMMGISSASPMRIPAERFLKLRAIGAPAVVLYLAIQGIFRGL 51
+ LGSGI +N+MGI + SPMR PAE+FL LRA G PA+VL LA QG FRG
Sbjct: 204 LTLGSGILMNIMGIPADSPMRGPAEQFLTLRAFGTPAIVLALAAQGTFRGF 254
>Glyma13g41460.1
Length = 555
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 38/44 (86%)
Query: 9 LNMMGISSASPMRIPAERFLKLRAIGAPAVVLYLAIQGIFRGLR 52
LN MG++S SPM PA+++LKLR++GAPAV+L LA+QG+FRG +
Sbjct: 232 LNFMGVTSDSPMLHPAKQYLKLRSLGAPAVLLSLAMQGVFRGFK 275
>Glyma13g41460.2
Length = 553
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 38/44 (86%)
Query: 9 LNMMGISSASPMRIPAERFLKLRAIGAPAVVLYLAIQGIFRGLR 52
LN MG++S SPM PA+++LKLR++GAPAV+L LA+QG+FRG +
Sbjct: 230 LNFMGVTSDSPMLHPAKQYLKLRSLGAPAVLLSLAMQGVFRGFK 273
>Glyma15g03930.1
Length = 554
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 37/44 (84%)
Query: 9 LNMMGISSASPMRIPAERFLKLRAIGAPAVVLYLAIQGIFRGLR 52
LN MG++S SPM PA+++LKLR +GAPAV+L LA+QG+FRG +
Sbjct: 231 LNFMGVTSDSPMLHPAKQYLKLRTLGAPAVLLSLAMQGVFRGFK 274
>Glyma12g36610.1
Length = 504
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 35/41 (85%)
Query: 12 MGISSASPMRIPAERFLKLRAIGAPAVVLYLAIQGIFRGLR 52
MG+ SPM IPAE++L+LR+IG+PAV+L LA+QGIFRG +
Sbjct: 197 MGLKHDSPMLIPAEKYLRLRSIGSPAVLLSLAMQGIFRGFK 237
>Glyma13g27300.1
Length = 545
Score = 57.8 bits (138), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 8 FLNMMGISSASPMRIPAERFLKLRAIGAPAVVLYLAIQGIFRGLR 52
L +MG+ SPM PAE +L+LR+ GAPAV+L LA+QGIFRG +
Sbjct: 218 LLGVMGVKRDSPMLKPAESYLRLRSFGAPAVLLSLAMQGIFRGFK 262
>Glyma10g21860.1
Length = 500
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 36/44 (81%)
Query: 9 LNMMGISSASPMRIPAERFLKLRAIGAPAVVLYLAIQGIFRGLR 52
L+ MG+ S SPM PA+++L LR+ GAPAV++ +AIQG+FRG++
Sbjct: 172 LSYMGVDSNSPMFKPAQQYLTLRSFGAPAVIISMAIQGVFRGIK 215
>Glyma02g31370.1
Length = 494
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 36/44 (81%)
Query: 9 LNMMGISSASPMRIPAERFLKLRAIGAPAVVLYLAIQGIFRGLR 52
L+ MG+ S SPM PA+++L LR+ GAPAV++ +AIQG+FRG++
Sbjct: 167 LSYMGVDSNSPMFKPAQQYLTLRSFGAPAVIISMAIQGVFRGIK 210
>Glyma15g43020.1
Length = 376
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 34/45 (75%)
Query: 8 FLNMMGISSASPMRIPAERFLKLRAIGAPAVVLYLAIQGIFRGLR 52
L MG+ SPM PA ++L+LR++GAPAV+L LA+QGIFRG +
Sbjct: 226 LLAAMGLKPDSPMLNPAIKYLRLRSLGAPAVLLSLAMQGIFRGFK 270
>Glyma09g15550.1
Length = 540
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 9 LNMMGISSASPMRIPAERFLKLRAIGAPAVVLYLAIQGIFRGLR 52
L MG+ SPM PA ++L+LR++GAPAV+L LA+QGIFRG +
Sbjct: 214 LAAMGLKPDSPMLNPAIKYLRLRSLGAPAVLLSLAMQGIFRGFK 257
>Glyma12g36620.1
Length = 534
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 12 MGISSASPMRIPAERFLKLRAIGAPAVVLYLAIQGIFRGLRIQGLLSYV 60
M ++ SPM PAE++L+LR+ GAPAV+L LA+QGIF G + YV
Sbjct: 213 MDVAYDSPMLNPAEKYLRLRSFGAPAVLLSLAMQGIFGGFKDTATPLYV 261
>Glyma04g14480.1
Length = 266
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 12 MGISSASPMRIPAERFLKLRAIGAPAVVLYLAIQGIFRGLR 52
MG+ SPM A ++L+LR++GAP V+L LA+QGIFRG +
Sbjct: 129 MGLKHDSPMLNLAIKYLRLRSLGAPRVLLSLAMQGIFRGFK 169