Jatropha Genome Database

JcCB0318551.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0318551.10 - phase: 0 /partial
         (233 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g40570.1                                                       366   e-102
Glyma17g37540.1                                                       365   e-101
Glyma20g34160.1                                                       314   7e-86

>Glyma14g40570.1 
          Length = 500

 Score =  366 bits (940), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 170/200 (85%), Positives = 189/200 (94%), Gaps = 5/200 (2%)

Query: 36  KCRKSISKKIV--SVMAPQQSERRPATTGSVKTAMTMTEKILAKASEKPQLSPGENVWVN 93
           +C K++ +KI+  ++ APQ   R+P+TTGSV+TAMTMTEKILA+ASEK QL+PG+NVWVN
Sbjct: 28  RCFKAVPRKIIRCAIAAPQ---RQPSTTGSVRTAMTMTEKILARASEKAQLTPGDNVWVN 84

Query: 94  VDVLMTHDVCGPGSIGIFKKEFGANAKVWDREKIVIIPDHYIFTADERANRNVDILRDFC 153
           VD+LMTHDVCGPGSIGIFK+EFG +AKVWDREK+VIIPDHYIFT+DERANRNVDILRDFC
Sbjct: 85  VDILMTHDVCGPGSIGIFKREFGEDAKVWDREKLVIIPDHYIFTSDERANRNVDILRDFC 144

Query: 154 YEQNIKYFYDIKDLSNFKANPDYKGVCHVALAQEGHCRPGEVLLGTDSHTCTAGAFGQFA 213
           +EQNIKYFYDIKDLSNFK NPDYKGVCHVALAQEGHCRPGEVLLGTDSHTCTAGAFGQFA
Sbjct: 145 HEQNIKYFYDIKDLSNFKVNPDYKGVCHVALAQEGHCRPGEVLLGTDSHTCTAGAFGQFA 204

Query: 214 TGIGNTDAGFVLGTGKLLLK 233
           TGIGNTDAGFVLGTGKLLLK
Sbjct: 205 TGIGNTDAGFVLGTGKLLLK 224


>Glyma17g37540.1 
          Length = 502

 Score =  365 bits (936), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 170/200 (85%), Positives = 189/200 (94%), Gaps = 5/200 (2%)

Query: 36  KCRKSISKKIV--SVMAPQQSERRPATTGSVKTAMTMTEKILAKASEKPQLSPGENVWVN 93
           +C K++ ++I+  +V APQ   R+P+TTGSV+TAMTMTEKILA+ASEK QL+PG+NVWVN
Sbjct: 29  RCFKALPRRIIRCAVAAPQ---RQPSTTGSVRTAMTMTEKILARASEKVQLTPGDNVWVN 85

Query: 94  VDVLMTHDVCGPGSIGIFKKEFGANAKVWDREKIVIIPDHYIFTADERANRNVDILRDFC 153
           VD+LMTHDVCGPGSIGIFK+EFG +AKVWDREK+VIIPDHYIFT+DERANRNVDILRDFC
Sbjct: 86  VDILMTHDVCGPGSIGIFKREFGDDAKVWDREKLVIIPDHYIFTSDERANRNVDILRDFC 145

Query: 154 YEQNIKYFYDIKDLSNFKANPDYKGVCHVALAQEGHCRPGEVLLGTDSHTCTAGAFGQFA 213
           +EQNIKYFYDIKDLSNFK NPDYKGVCHVALAQEGHCRPGEVLLGTDSHTCTAGAFGQFA
Sbjct: 146 HEQNIKYFYDIKDLSNFKVNPDYKGVCHVALAQEGHCRPGEVLLGTDSHTCTAGAFGQFA 205

Query: 214 TGIGNTDAGFVLGTGKLLLK 233
           TGIGNTDAGFVLGTGKLLLK
Sbjct: 206 TGIGNTDAGFVLGTGKLLLK 225


>Glyma20g34160.1 
          Length = 535

 Score =  314 bits (804), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 149/205 (72%), Positives = 171/205 (83%), Gaps = 7/205 (3%)

Query: 36  KCRKSISKKIVSVMAPQQSERRPATTGSV-------KTAMTMTEKILAKASEKPQLSPGE 88
           KC+K+ S KIVSV++  +++R P+ TGSV       K  MT TEKILA+A+EK ++ PGE
Sbjct: 32  KCKKTSSNKIVSVVSSPKNKRSPSATGSVVFTFFPTKIPMTATEKILARAAEKCEVRPGE 91

Query: 89  NVWVNVDVLMTHDVCGPGSIGIFKKEFGANAKVWDREKIVIIPDHYIFTADERANRNVDI 148
           N W NVDVLM +D+  PG  GIFKKEFG  AKVWDREKIV+IPDHYIFT DERA+RNVDI
Sbjct: 92  NAWANVDVLMINDITCPGISGIFKKEFGNTAKVWDREKIVVIPDHYIFTNDERAHRNVDI 151

Query: 149 LRDFCYEQNIKYFYDIKDLSNFKANPDYKGVCHVALAQEGHCRPGEVLLGTDSHTCTAGA 208
            RDFC EQ+IKYFYDI+D SNF+ANPDYKGVCHVALAQEGHCRPGEVL GTDSHT +AGA
Sbjct: 152 ARDFCVEQDIKYFYDIQDRSNFRANPDYKGVCHVALAQEGHCRPGEVLFGTDSHTTSAGA 211

Query: 209 FGQFATGIGNTDAGFVLGTGKLLLK 233
           FGQFATG+GNTDA FVLGTGK+LLK
Sbjct: 212 FGQFATGVGNTDAAFVLGTGKILLK 236