Jatropha Genome Database

JcCB0317061.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0317061.10 - phase: 0 /partial
         (192 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g42370.1                                                       328   3e-90
Glyma06g12430.2                                                       325   2e-89
Glyma06g12430.1                                                       325   2e-89

>Glyma04g42370.1 
          Length = 600

 Score =  328 bits (840), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 156/191 (81%), Positives = 170/191 (89%)

Query: 1   LILELGPYIEELKKTGGAIKEFVNPKYKDASKTSFKSSTRLECMMQDYPKTLPPSARVGF 60
           LILELG YIEEL KTGGAI+EFVNPKYKDASKTSFKSSTRLECMMQDYPKTLPPSARVGF
Sbjct: 358 LILELGHYIEELSKTGGAIQEFVNPKYKDASKTSFKSSTRLECMMQDYPKTLPPSARVGF 417

Query: 61  TVMDTWLAYAPVKNNPEDAAKVPKGNPYHSATSGEMAIYRANSLILRKXXXXXXXXXXXX 120
           TVM+TWLAYAPVKNN EDAAKVPKGNPYHSATSGEMAIYRANS+ILRK            
Sbjct: 418 TVMETWLAYAPVKNNAEDAAKVPKGNPYHSATSGEMAIYRANSIILRKAGVQVADPVVQV 477

Query: 121 FNGQEVEVWPRITWKPKWGLTFSDVKRKVSGSCSISQRSTMAIKGRNIFVEDLSLDGALV 180
           FNGQEVEVWPRITWKPKWGLTF+ +K KVSG+CSIS RST+AIKG NIF+E+LS+DGAL+
Sbjct: 478 FNGQEVEVWPRITWKPKWGLTFNRIKSKVSGNCSISLRSTLAIKGPNIFIENLSVDGALI 537

Query: 181 IESVDGAEVCI 191
           I++VD AEV +
Sbjct: 538 IDAVDDAEVNV 548


>Glyma06g12430.2 
          Length = 600

 Score =  325 bits (833), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 155/191 (81%), Positives = 170/191 (89%)

Query: 1   LILELGPYIEELKKTGGAIKEFVNPKYKDASKTSFKSSTRLECMMQDYPKTLPPSARVGF 60
           LILELGPYIEEL KTGGAI+EFVNPKYKDASKTSFKSSTRLECMMQDYPKTLP SARVGF
Sbjct: 358 LILELGPYIEELSKTGGAIQEFVNPKYKDASKTSFKSSTRLECMMQDYPKTLPLSARVGF 417

Query: 61  TVMDTWLAYAPVKNNPEDAAKVPKGNPYHSATSGEMAIYRANSLILRKXXXXXXXXXXXX 120
           TVM+TWLAYAPVKNN EDAAKVPKGNPYHSATSGEMAIYRANS+IL+K            
Sbjct: 418 TVMETWLAYAPVKNNAEDAAKVPKGNPYHSATSGEMAIYRANSIILKKAGVQVADPVVQV 477

Query: 121 FNGQEVEVWPRITWKPKWGLTFSDVKRKVSGSCSISQRSTMAIKGRNIFVEDLSLDGALV 180
           FNGQEVEVWPRITWKPKWGLTF+ +K KVSG+CSIS RST+AIKG NIF+E+LS+DGAL+
Sbjct: 478 FNGQEVEVWPRITWKPKWGLTFNRIKGKVSGNCSISLRSTLAIKGPNIFIENLSVDGALI 537

Query: 181 IESVDGAEVCI 191
           I++VD AEV +
Sbjct: 538 IDAVDDAEVNV 548


>Glyma06g12430.1 
          Length = 600

 Score =  325 bits (833), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 155/191 (81%), Positives = 170/191 (89%)

Query: 1   LILELGPYIEELKKTGGAIKEFVNPKYKDASKTSFKSSTRLECMMQDYPKTLPPSARVGF 60
           LILELGPYIEEL KTGGAI+EFVNPKYKDASKTSFKSSTRLECMMQDYPKTLP SARVGF
Sbjct: 358 LILELGPYIEELSKTGGAIQEFVNPKYKDASKTSFKSSTRLECMMQDYPKTLPLSARVGF 417

Query: 61  TVMDTWLAYAPVKNNPEDAAKVPKGNPYHSATSGEMAIYRANSLILRKXXXXXXXXXXXX 120
           TVM+TWLAYAPVKNN EDAAKVPKGNPYHSATSGEMAIYRANS+IL+K            
Sbjct: 418 TVMETWLAYAPVKNNAEDAAKVPKGNPYHSATSGEMAIYRANSIILKKAGVQVADPVVQV 477

Query: 121 FNGQEVEVWPRITWKPKWGLTFSDVKRKVSGSCSISQRSTMAIKGRNIFVEDLSLDGALV 180
           FNGQEVEVWPRITWKPKWGLTF+ +K KVSG+CSIS RST+AIKG NIF+E+LS+DGAL+
Sbjct: 478 FNGQEVEVWPRITWKPKWGLTFNRIKGKVSGNCSISLRSTLAIKGPNIFIENLSVDGALI 537

Query: 181 IESVDGAEVCI 191
           I++VD AEV +
Sbjct: 538 IDAVDDAEVNV 548