Jatropha Genome Database

JcCB0309911.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0309911.10 + phase: 1 /partial
         (248 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g25830.2                                                       428   e-120
Glyma20g25830.1                                                       428   e-120
Glyma10g41430.1                                                       419   e-117
Glyma03g23420.1                                                       119   4e-27

>Glyma20g25830.2 
          Length = 440

 Score =  428 bits (1101), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 199/218 (91%), Positives = 210/218 (96%)

Query: 22  IWASGVLNPESSASGDMETSVKRGVWAMIAVFLAYCLLQAPSTVLIRPHPAIWRLVHGMA 81
           IWASG L+PE  ASGD+ TSVKRGVWAMIAVFLAYCLLQAPSTVLIRPHPAIWRLVHGMA
Sbjct: 222 IWASGALDPERDASGDLVTSVKRGVWAMIAVFLAYCLLQAPSTVLIRPHPAIWRLVHGMA 281

Query: 82  VVYLVALTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCRIYMPENPTSRFKNVYDT 141
           VVYLVALTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCRIY+PENP SRFKNVY+T
Sbjct: 282 VVYLVALTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCRIYLPENPASRFKNVYET 341

Query: 142 LFDEFVLAHIFGWWGKAILLRNQPLLWVLSIGFEFLEFTFRHMLPNFNECWWDSIILDIL 201
           LFDEFVLAH+ GWWGKAIL+RNQPLLWVLSIGFE +E+TFRHMLPNFNECWWDSIILDIL
Sbjct: 342 LFDEFVLAHVIGWWGKAILIRNQPLLWVLSIGFELVEYTFRHMLPNFNECWWDSIILDIL 401

Query: 202 ICNWFGIWAGMHTVRYFDGKTYEWVGISRQPNIIGKAC 239
           ICNWFGIWAGMHTVRYFDGKTY+WVG+S+QPNIIGK C
Sbjct: 402 ICNWFGIWAGMHTVRYFDGKTYKWVGLSQQPNIIGKVC 439


>Glyma20g25830.1 
          Length = 440

 Score =  428 bits (1101), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 199/218 (91%), Positives = 210/218 (96%)

Query: 22  IWASGVLNPESSASGDMETSVKRGVWAMIAVFLAYCLLQAPSTVLIRPHPAIWRLVHGMA 81
           IWASG L+PE  ASGD+ TSVKRGVWAMIAVFLAYCLLQAPSTVLIRPHPAIWRLVHGMA
Sbjct: 222 IWASGALDPERDASGDLVTSVKRGVWAMIAVFLAYCLLQAPSTVLIRPHPAIWRLVHGMA 281

Query: 82  VVYLVALTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCRIYMPENPTSRFKNVYDT 141
           VVYLVALTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCRIY+PENP SRFKNVY+T
Sbjct: 282 VVYLVALTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCRIYLPENPASRFKNVYET 341

Query: 142 LFDEFVLAHIFGWWGKAILLRNQPLLWVLSIGFEFLEFTFRHMLPNFNECWWDSIILDIL 201
           LFDEFVLAH+ GWWGKAIL+RNQPLLWVLSIGFE +E+TFRHMLPNFNECWWDSIILDIL
Sbjct: 342 LFDEFVLAHVIGWWGKAILIRNQPLLWVLSIGFELVEYTFRHMLPNFNECWWDSIILDIL 401

Query: 202 ICNWFGIWAGMHTVRYFDGKTYEWVGISRQPNIIGKAC 239
           ICNWFGIWAGMHTVRYFDGKTY+WVG+S+QPNIIGK C
Sbjct: 402 ICNWFGIWAGMHTVRYFDGKTYKWVGLSQQPNIIGKVC 439


>Glyma10g41430.1 
          Length = 426

 Score =  419 bits (1077), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 198/217 (91%), Positives = 209/217 (96%)

Query: 22  IWASGVLNPESSASGDMETSVKRGVWAMIAVFLAYCLLQAPSTVLIRPHPAIWRLVHGMA 81
           IWASG L+PE  ASGD+ TSVKRGVWAMIAVFLAYCLLQAPSTVLIRPHPAIWRLVHGMA
Sbjct: 54  IWASGALDPERDASGDLVTSVKRGVWAMIAVFLAYCLLQAPSTVLIRPHPAIWRLVHGMA 113

Query: 82  VVYLVALTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCRIYMPENPTSRFKNVYDT 141
           VVYLVALTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCRIY+PENP SRFKNVY+T
Sbjct: 114 VVYLVALTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCRIYLPENPASRFKNVYET 173

Query: 142 LFDEFVLAHIFGWWGKAILLRNQPLLWVLSIGFEFLEFTFRHMLPNFNECWWDSIILDIL 201
           LFDEFVLAH+ GWWGKAIL+RNQPLLWVLSIGFE +E+TFRHMLPNFNECWWDSIILDIL
Sbjct: 174 LFDEFVLAHVIGWWGKAILIRNQPLLWVLSIGFELVEYTFRHMLPNFNECWWDSIILDIL 233

Query: 202 ICNWFGIWAGMHTVRYFDGKTYEWVGISRQPNIIGKA 238
           ICNWFGIWAGMHTVRYFDGKTY+WVG+S+QPNIIGK 
Sbjct: 234 ICNWFGIWAGMHTVRYFDGKTYKWVGLSQQPNIIGKV 270


>Glyma03g23420.1 
          Length = 108

 Score =  119 bits (297), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 62/91 (68%), Positives = 64/91 (70%), Gaps = 23/91 (25%)

Query: 45  GVWAMIAVFLAYCLLQAPST-----------------------VLIRPHPAIWRLVHGMA 81
           GVWAMIA F+AYCLLQAPST                       VLIRPHPAIWRLVHGM 
Sbjct: 1   GVWAMIATFIAYCLLQAPSTLLAKKKSYWKMILFKLGVRESVCVLIRPHPAIWRLVHGMV 60

Query: 82  VVYLVALTFLLFQKRDDARQFMKFLHPDLGV 112
           V YLVALTFLLFQKRDDA QFMKFLHPDLG+
Sbjct: 61  VFYLVALTFLLFQKRDDAHQFMKFLHPDLGI 91