Jatropha Genome Database

JcCB0302981.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0302981.20 + phase: 0 /partial
         (178 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g32960.3                                                       129   2e-30
Glyma13g32960.2                                                       129   2e-30
Glyma13g32960.1                                                       129   2e-30
Glyma07g30120.1                                                       100   8e-22
Glyma15g06360.1                                                        97   1e-20
Glyma08g07190.1                                                        94   5e-20
Glyma01g02640.2                                                        67   8e-12
Glyma01g02640.1                                                        67   8e-12
Glyma09g33290.1                                                        60   8e-10

>Glyma13g32960.3 
          Length = 604

 Score =  129 bits (323), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 77/173 (44%), Positives = 97/173 (56%), Gaps = 11/173 (6%)

Query: 1   MGSTFLSPPLKRTIHYSTITAGMPDPNSINGTSNKRSKXXXXXXXXXXXGHVSFRLLCHA 60
           MGS FLSPP KR+       A  P+P   NG S +  +           GHV+FRLLC+A
Sbjct: 1   MGSNFLSPPAKRS-------ALDPNPFPPNGPSKRSRQSKPPPPLSVPPGHVAFRLLCNA 53

Query: 61  SRXXXXXXXXXXXXXQLQQDTGAKIRIEEAPVESPDRXXXXXXXXXXXXXXXXXNDGSGR 120
           SR              LQQ TGAKIRIE+AP ESPDR                 N+    
Sbjct: 54  SRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQESPDRVILVIADAALSCKVLLRNE---- 109

Query: 121 QEIDVSKAQEALVRVFERILTVAAESDGIGVAGGVVSCRLLGEAKQVGSVIGK 173
           + ++VSKAQEAL++VF+RIL VAAE +G+ V   V+SCRL+ ++ Q GSVIGK
Sbjct: 110 EVVEVSKAQEALLKVFDRILEVAAEMEGVDVGDRVMSCRLVADSAQAGSVIGK 162


>Glyma13g32960.2 
          Length = 684

 Score =  129 bits (323), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 77/173 (44%), Positives = 97/173 (56%), Gaps = 11/173 (6%)

Query: 1   MGSTFLSPPLKRTIHYSTITAGMPDPNSINGTSNKRSKXXXXXXXXXXXGHVSFRLLCHA 60
           MGS FLSPP KR+       A  P+P   NG S +  +           GHV+FRLLC+A
Sbjct: 1   MGSNFLSPPAKRS-------ALDPNPFPPNGPSKRSRQSKPPPPLSVPPGHVAFRLLCNA 53

Query: 61  SRXXXXXXXXXXXXXQLQQDTGAKIRIEEAPVESPDRXXXXXXXXXXXXXXXXXNDGSGR 120
           SR              LQQ TGAKIRIE+AP ESPDR                 N+    
Sbjct: 54  SRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQESPDRVILVIADAALSCKVLLRNE---- 109

Query: 121 QEIDVSKAQEALVRVFERILTVAAESDGIGVAGGVVSCRLLGEAKQVGSVIGK 173
           + ++VSKAQEAL++VF+RIL VAAE +G+ V   V+SCRL+ ++ Q GSVIGK
Sbjct: 110 EVVEVSKAQEALLKVFDRILEVAAEMEGVDVGDRVMSCRLVADSAQAGSVIGK 162


>Glyma13g32960.1 
          Length = 685

 Score =  129 bits (323), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 77/173 (44%), Positives = 97/173 (56%), Gaps = 11/173 (6%)

Query: 1   MGSTFLSPPLKRTIHYSTITAGMPDPNSINGTSNKRSKXXXXXXXXXXXGHVSFRLLCHA 60
           MGS FLSPP KR+       A  P+P   NG S +  +           GHV+FRLLC+A
Sbjct: 1   MGSNFLSPPAKRS-------ALDPNPFPPNGPSKRSRQSKPPPPLSVPPGHVAFRLLCNA 53

Query: 61  SRXXXXXXXXXXXXXQLQQDTGAKIRIEEAPVESPDRXXXXXXXXXXXXXXXXXNDGSGR 120
           SR              LQQ TGAKIRIE+AP ESPDR                 N+    
Sbjct: 54  SRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQESPDRVILVIADAALSCKVLLRNE---- 109

Query: 121 QEIDVSKAQEALVRVFERILTVAAESDGIGVAGGVVSCRLLGEAKQVGSVIGK 173
           + ++VSKAQEAL++VF+RIL VAAE +G+ V   V+SCRL+ ++ Q GSVIGK
Sbjct: 110 EVVEVSKAQEALLKVFDRILEVAAEMEGVDVGDRVMSCRLVADSAQAGSVIGK 162


>Glyma07g30120.1 
          Length = 590

 Score =  100 bits (249), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 66/149 (44%), Positives = 81/149 (54%), Gaps = 22/149 (14%)

Query: 25  DPNSINGTSNKRSKXXXXXXXXXXXGHVSFRLLCHASRXXXXXXXXXXXXXQLQQDTGAK 84
           +PN  NG  N RS+            HV+FRLLCHASR              LQ+ TGAK
Sbjct: 7   NPNHSNGHVN-RSRPYTT--------HVTFRLLCHASRVGAIIGKSGVLIKTLQEATGAK 57

Query: 85  IRIEEAPVESPDRXXXXXXXXXXXXXXXXXNDGSGRQEIDVSKAQEALVRVFERILTVAA 144
           IRIE+AP +SPDR                 +DG      +VS AQ AL++VF+R+L VAA
Sbjct: 58  IRIEDAPPDSPDRVILVSAPAAA-------SDG------EVSTAQVALLKVFDRVLDVAA 104

Query: 145 ESDGIGVAGGVVSCRLLGEAKQVGSVIGK 173
           E+ G  V   VVSCRLL +  QVG+VIGK
Sbjct: 105 ETAGTEVGDRVVSCRLLADTSQVGAVIGK 133


>Glyma15g06360.1 
          Length = 639

 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/124 (45%), Positives = 70/124 (56%), Gaps = 4/124 (3%)

Query: 50  GHVSFRLLCHASRXXXXXXXXXXXXXQLQQDTGAKIRIEEAPVESPDRXXXXXXXXXXXX 109
           GHV+FRLLC+ASR              LQQ TGAKIRIE+AP E PDR            
Sbjct: 16  GHVAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQELPDRIILVIADAALSG 75

Query: 110 XXXXXNDGSGRQEIDVSKAQEALVRVFERILTVAAESDGIGVAGGVVSCRLLGEAKQVGS 169
                N+    + I+VSKAQEAL++VF+RIL        + V   V+SCRL+ +A Q GS
Sbjct: 76  KILLRNE----EVIEVSKAQEALLKVFDRILRSGGGDRSVDVGDRVMSCRLVADAAQAGS 131

Query: 170 VIGK 173
           VIGK
Sbjct: 132 VIGK 135


>Glyma08g07190.1 
          Length = 624

 Score = 94.4 bits (233), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 67/154 (43%), Positives = 79/154 (51%), Gaps = 27/154 (17%)

Query: 23  MPDPNSINGTSN---KRSKXXXXXXXXXXXGHVSFRLLCHASRXXXXXXXXXXXXXQLQQ 79
           M DPNS    SN    RS+            HV+FRLLCHASR              LQ+
Sbjct: 1   MADPNSNPNHSNAHVNRSRHYTT--------HVTFRLLCHASRVGAIIGKSGVLIKSLQE 52

Query: 80  DTGAKIRIEEAPVESPDRXXXXXXXXXXXXXXXXXNDGSGRQEIDVSKAQEALVRVFERI 139
            TGAKIRI +AP +SPDR                  DG      ++S AQEAL++VF+R+
Sbjct: 53  ATGAKIRIVDAPPDSPDR-------VILVSAPSVTEDG------ELSTAQEALLKVFDRV 99

Query: 140 LTVAAESDGIGVAGGVVSCRLLGEAKQVGSVIGK 173
           L VAA   G  V   VVSCRLL E  QVG+VIGK
Sbjct: 100 LDVAA---GTEVGDLVVSCRLLAETSQVGAVIGK 130


>Glyma01g02640.2 
          Length = 602

 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 75/169 (44%), Gaps = 15/169 (8%)

Query: 8   PPLKRTIHYSTITAGMPDPNSINGTSNKRSKXXXXXXXXXXXGHVSFRLLCHASRXXXXX 67
           P    T H +T     P P   N T+  RS            G ++FRL+CHAS      
Sbjct: 4   PATSDTDHQTT-----PSPKRSNTTTTNRSSKRPVFKVLP--GQIAFRLVCHASTVGGLI 56

Query: 68  XXXXXXXXQLQQDTGAKIRIEEAPVESPDRXXXXXXXXXXXXXXXXXNDGSGRQEIDVSK 127
                   QL+++TG KI  E++   + DR                 + G    E++VS 
Sbjct: 57  GSSGSIVSQLRRETGCKIHCEDSLSSAEDRVILVIGSLSPRKGLLLGDGG----EVEVSS 112

Query: 128 AQEALVRVFERILTVAAESDGIG---VAGGVVSCRLLGEAKQVGSVIGK 173
           AQEA+VRVFER+  + AE  G+       G V  +LL    Q+G+V+GK
Sbjct: 113 AQEAVVRVFERVWDLEAE-KGVNSNRAVNGEVFSKLLAHTSQIGAVVGK 160


>Glyma01g02640.1 
          Length = 616

 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 75/169 (44%), Gaps = 15/169 (8%)

Query: 8   PPLKRTIHYSTITAGMPDPNSINGTSNKRSKXXXXXXXXXXXGHVSFRLLCHASRXXXXX 67
           P    T H +T     P P   N T+  RS            G ++FRL+CHAS      
Sbjct: 4   PATSDTDHQTT-----PSPKRSNTTTTNRSSKRPVFKVLP--GQIAFRLVCHASTVGGLI 56

Query: 68  XXXXXXXXQLQQDTGAKIRIEEAPVESPDRXXXXXXXXXXXXXXXXXNDGSGRQEIDVSK 127
                   QL+++TG KI  E++   + DR                 + G    E++VS 
Sbjct: 57  GSSGSIVSQLRRETGCKIHCEDSLSSAEDRVILVIGSLSPRKGLLLGDGG----EVEVSS 112

Query: 128 AQEALVRVFERILTVAAESDGIG---VAGGVVSCRLLGEAKQVGSVIGK 173
           AQEA+VRVFER+  + AE  G+       G V  +LL    Q+G+V+GK
Sbjct: 113 AQEAVVRVFERVWDLEAEK-GVNSNRAVNGEVFSKLLAHTSQIGAVVGK 160


>Glyma09g33290.1 
          Length = 611

 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 8/127 (6%)

Query: 50  GHVSFRLLCHASRXXXXXXXXXXXXXQLQQDTGAKIRIEEAPVESPDRXXXXXXXXXXXX 109
           G ++FRL+CHAS              QL+++T  KI  E++   + DR            
Sbjct: 48  GQIAFRLVCHASIVGGLIGSSGSIVSQLRRETACKIHCEDSLSSAEDRVILVIGSVSPRK 107

Query: 110 XXXXXNDGSGRQEIDVSKAQEALVRVFERILTVAAESDGIGVAGGV---VSCRLLGEAKQ 166
                + G    E++VS AQEA+VRVFER+  + AE  G+     V   V  +LL    Q
Sbjct: 108 GLQLGDGG----EVEVSSAQEAIVRVFERVWGLEAE-KGVNSNRAVNSEVFSKLLAHTSQ 162

Query: 167 VGSVIGK 173
           +G+V+GK
Sbjct: 163 IGAVVGK 169