Jatropha Genome Database

JcCB0302671.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0302671.10 - phase: 0 /pseudo/partial
         (197 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g28380.1                                                       155   3e-38
Glyma08g11370.1                                                       152   2e-37
Glyma13g07270.1                                                       115   3e-26
Glyma13g07310.1                                                       106   2e-23
Glyma05g28380.2                                                        82   4e-16

>Glyma05g28380.1 
          Length = 916

 Score =  155 bits (391), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 81/138 (58%), Positives = 96/138 (69%)

Query: 60  RESACIYVSSSVKAVLLDESKEKAYLSKGGMWSVHKFGGTCVGSSERIKNVAEIIVNDGS 119
           RE+    V +S   V    S E+  L KG  WSVHKFGGTCVG+S+RIKNVA+II+ D S
Sbjct: 56  REAPSTTVRASFTDVSPSVSLEEKQLPKGETWSVHKFGGTCVGTSQRIKNVADIILKDDS 115

Query: 120 EGKLVVVSALSKVTDMLYDLIYKAQSRDDSYIAAADAVFEKHKXXXXXXXXXXXXXXXXX 179
           E KLVVVSA+SKVTDM+YDLI+KAQSRD+SYIAA DAV EKH                  
Sbjct: 116 ERKLVVVSAMSKVTDMMYDLIHKAQSRDESYIAALDAVSEKHSATAHDILDGDNLASFLS 175

Query: 180 QLQHDVNNLKAMLRAIFI 197
           +L HD++NLKAMLRAI+I
Sbjct: 176 KLHHDISNLKAMLRAIYI 193


>Glyma08g11370.1 
          Length = 916

 Score =  152 bits (384), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 79/138 (57%), Positives = 96/138 (69%)

Query: 60  RESACIYVSSSVKAVLLDESKEKAYLSKGGMWSVHKFGGTCVGSSERIKNVAEIIVNDGS 119
           RE+    V +S   V  + S E+  L KG  WSVHKFGGTCVG+S+RIKNVA+II+ D S
Sbjct: 56  REAPSTSVRASFTDVSPNVSLEEKQLPKGETWSVHKFGGTCVGTSQRIKNVADIILKDDS 115

Query: 120 EGKLVVVSALSKVTDMLYDLIYKAQSRDDSYIAAADAVFEKHKXXXXXXXXXXXXXXXXX 179
           E KLVVVSA+SKVTDM+YDLI+KAQSRD+SY AA +AV EKH                  
Sbjct: 116 ERKLVVVSAMSKVTDMMYDLIHKAQSRDESYTAALNAVLEKHSATAHDILDGDNLATFLS 175

Query: 180 QLQHDVNNLKAMLRAIFI 197
           +L HD++NLKAMLRAI+I
Sbjct: 176 KLHHDISNLKAMLRAIYI 193


>Glyma13g07270.1 
          Length = 134

 Score =  115 bits (288), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 56/79 (70%), Positives = 67/79 (84%)

Query: 79  SKEKAYLSKGGMWSVHKFGGTCVGSSERIKNVAEIIVNDGSEGKLVVVSALSKVTDMLYD 138
           S E+  L KG  WSVHKFGGTCVG+S+RIKNVA+II+ D S  KLVVVSA+SKV +M+YD
Sbjct: 56  SLEEKQLPKGETWSVHKFGGTCVGTSQRIKNVADIILKDDSGRKLVVVSAMSKVKNMMYD 115

Query: 139 LIYKAQSRDDSYIAAADAV 157
           LI+KAQSRD+SYIAA D+V
Sbjct: 116 LIHKAQSRDESYIAALDSV 134


>Glyma13g07310.1 
          Length = 278

 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 55/93 (59%), Positives = 70/93 (75%), Gaps = 4/93 (4%)

Query: 60  RESACIYVSSSVKAVLLDE----SKEKAYLSKGGMWSVHKFGGTCVGSSERIKNVAEIIV 115
           R+   +  S++V+A L D     S E+  L KG  WSVHKFGGTCVG+S+RIKNVA+II+
Sbjct: 184 RKGLTLPPSTTVRASLTDVKPGVSLEEKKLPKGETWSVHKFGGTCVGTSQRIKNVADIIL 243

Query: 116 NDGSEGKLVVVSALSKVTDMLYDLIYKAQSRDD 148
            D S  KLVVVSA+SKV +M+YDLI+KAQSRD+
Sbjct: 244 KDDSGRKLVVVSAMSKVKNMMYDLIHKAQSRDE 276


>Glyma05g28380.2 
          Length = 715

 Score = 81.6 bits (200), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 40/69 (57%), Positives = 48/69 (69%)

Query: 129 LSKVTDMLYDLIYKAQSRDDSYIAAADAVFEKHKXXXXXXXXXXXXXXXXXQLQHDVNNL 188
           +SKVTDM+YDLI+KAQSRD+SYIAA DAV EKH                  +L HD++NL
Sbjct: 1   MSKVTDMMYDLIHKAQSRDESYIAALDAVSEKHSATAHDILDGDNLASFLSKLHHDISNL 60

Query: 189 KAMLRAIFI 197
           KAMLRAI+I
Sbjct: 61  KAMLRAIYI 69