Jatropha Genome Database

JcCB0302351.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0302351.10 - phase: 1 /partial
         (151 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g07490.1                                                       139   1e-33
Glyma17g08980.1                                                       138   2e-33
Glyma02g13670.1                                                       100   1e-21
Glyma02g13670.2                                                       100   1e-21
Glyma01g09010.4                                                        93   1e-19
Glyma01g09010.1                                                        93   1e-19
Glyma01g09010.3                                                        93   1e-19
Glyma01g09010.2                                                        93   1e-19
Glyma08g28010.1                                                        73   1e-13
Glyma18g51080.1                                                        67   9e-12

>Glyma05g07490.1 
          Length = 548

 Score =  139 bits (350), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/156 (55%), Positives = 105/156 (67%), Gaps = 12/156 (7%)

Query: 1   QPNFFNS---GRSGGIVNQLPPRMVSDAENIANQPQPQSHNTRLCTSDGAVAADKLKEQE 57
           Q NFF     G  GG+V+QL  R  SDAEN   QP  +      C +  A   +KLKE+E
Sbjct: 400 QLNFFTPTQIGGPGGVVSQLTHRSASDAENTKYQPSVE------CQTMTATN-EKLKEKE 452

Query: 58  LSIEGGTINISSVYSQGLLNTLTQALQSSGVDLSLASISVQIQLGKRANRRPILPTSI-- 115
           L+IEGG I+ISSVYS+GLL+TLT ALQSSGVDLS ASISVQI+LGK+AN R  +P S+  
Sbjct: 453 LTIEGGAISISSVYSKGLLHTLTHALQSSGVDLSQASISVQIELGKQANIRSNVPVSVCG 512

Query: 116 VKDNEVPCSNQGTTRPRVSDGEESGQALKKLKTSKS 151
            KD  VP +NQ   R RV+   +S QA+KKLKT +S
Sbjct: 513 AKDGAVPSNNQKMMRSRVASSGKSDQAVKKLKTCRS 548


>Glyma17g08980.1 
          Length = 566

 Score =  138 bits (348), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/156 (54%), Positives = 105/156 (67%), Gaps = 12/156 (7%)

Query: 1   QPNFFNS---GRSGGIVNQLPPRMVSDAENIANQPQPQSHNTRLCTSDGAVAADKLKEQE 57
           Q NFF     G  GG+V+QL  R  SDAE    QP  +      C +  A   +KLKE+E
Sbjct: 418 QLNFFTPTQIGGPGGVVSQLTHRSASDAEKTKYQPSVE------CQTMTATN-EKLKEKE 470

Query: 58  LSIEGGTINISSVYSQGLLNTLTQALQSSGVDLSLASISVQIQLGKRANRRPILPTSI-- 115
           L+IEGG I+ISSVYS+GLL+TLT ALQSSGVDLS ASISVQI+LGK+AN RP +P S+  
Sbjct: 471 LTIEGGAISISSVYSKGLLHTLTHALQSSGVDLSQASISVQIELGKQANIRPSVPVSVCA 530

Query: 116 VKDNEVPCSNQGTTRPRVSDGEESGQALKKLKTSKS 151
            KD +V  +NQ   R RV+   +S QA+KKLKT +S
Sbjct: 531 AKDGDVHSNNQKMMRSRVASSGKSDQAVKKLKTCRS 566


>Glyma02g13670.1 
          Length = 336

 Score = 99.8 bits (247), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 58/99 (58%), Positives = 71/99 (71%), Gaps = 2/99 (2%)

Query: 54  KEQELSIEGGTINISSVYSQGLLNTLTQALQSSGVDLSLASISVQIQLGKRANRRPILPT 113
           ++ ELS+EGGTI+ISS YSQGLLN LTQALQS+G+DLS ASISVQI LGKRAN+     T
Sbjct: 238 QQDELSVEGGTISISSAYSQGLLNNLTQALQSAGLDLSQASISVQINLGKRANKGLNCGT 297

Query: 114 SIVKDNEVPCSNQGTTRP--RVSDGEESGQALKKLKTSK 150
           S +K ++ P SN  T         GE+S QA K++KT K
Sbjct: 298 SSLKHHDNPSSNNQTIAHFRDAGSGEDSDQAQKRMKTYK 336


>Glyma02g13670.2 
          Length = 335

 Score = 99.8 bits (247), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 58/99 (58%), Positives = 71/99 (71%), Gaps = 2/99 (2%)

Query: 54  KEQELSIEGGTINISSVYSQGLLNTLTQALQSSGVDLSLASISVQIQLGKRANRRPILPT 113
           ++ ELS+EGGTI+ISS YSQGLLN LTQALQS+G+DLS ASISVQI LGKRAN+     T
Sbjct: 237 QQDELSVEGGTISISSAYSQGLLNNLTQALQSAGLDLSQASISVQINLGKRANKGLNCGT 296

Query: 114 SIVKDNEVPCSNQGTTRP--RVSDGEESGQALKKLKTSK 150
           S +K ++ P SN  T         GE+S QA K++KT K
Sbjct: 297 SSLKHHDNPSSNNQTIAHFRDAGSGEDSDQAQKRMKTYK 335


>Glyma01g09010.4 
          Length = 336

 Score = 92.8 bits (229), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/99 (54%), Positives = 67/99 (67%), Gaps = 2/99 (2%)

Query: 54  KEQELSIEGGTINISSVYSQGLLNTLTQALQSSGVDLSLASISVQIQLGKRANRRPILPT 113
           ++ E ++EGGTI+ISS YSQGLLN LTQALQS+G+DLS ASISVQI LGKR N+     T
Sbjct: 238 QQDEFTVEGGTISISSAYSQGLLNNLTQALQSAGLDLSQASISVQINLGKRGNKGLSCGT 297

Query: 114 SIVKDNEVPCSNQGTTRP--RVSDGEESGQALKKLKTSK 150
           S  K ++ P SN  T         GE+S Q  K++KT K
Sbjct: 298 SSPKHHDNPSSNNQTIAHFRDAGSGEDSDQVQKRMKTYK 336


>Glyma01g09010.1 
          Length = 336

 Score = 92.8 bits (229), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/99 (54%), Positives = 67/99 (67%), Gaps = 2/99 (2%)

Query: 54  KEQELSIEGGTINISSVYSQGLLNTLTQALQSSGVDLSLASISVQIQLGKRANRRPILPT 113
           ++ E ++EGGTI+ISS YSQGLLN LTQALQS+G+DLS ASISVQI LGKR N+     T
Sbjct: 238 QQDEFTVEGGTISISSAYSQGLLNNLTQALQSAGLDLSQASISVQINLGKRGNKGLSCGT 297

Query: 114 SIVKDNEVPCSNQGTTRP--RVSDGEESGQALKKLKTSK 150
           S  K ++ P SN  T         GE+S Q  K++KT K
Sbjct: 298 SSPKHHDNPSSNNQTIAHFRDAGSGEDSDQVQKRMKTYK 336


>Glyma01g09010.3 
          Length = 335

 Score = 92.8 bits (229), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/99 (54%), Positives = 67/99 (67%), Gaps = 2/99 (2%)

Query: 54  KEQELSIEGGTINISSVYSQGLLNTLTQALQSSGVDLSLASISVQIQLGKRANRRPILPT 113
           ++ E ++EGGTI+ISS YSQGLLN LTQALQS+G+DLS ASISVQI LGKR N+     T
Sbjct: 237 QQDEFTVEGGTISISSAYSQGLLNNLTQALQSAGLDLSQASISVQINLGKRGNKGLSCGT 296

Query: 114 SIVKDNEVPCSNQGTTRP--RVSDGEESGQALKKLKTSK 150
           S  K ++ P SN  T         GE+S Q  K++KT K
Sbjct: 297 SSPKHHDNPSSNNQTIAHFRDAGSGEDSDQVQKRMKTYK 335


>Glyma01g09010.2 
          Length = 335

 Score = 92.8 bits (229), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/99 (54%), Positives = 67/99 (67%), Gaps = 2/99 (2%)

Query: 54  KEQELSIEGGTINISSVYSQGLLNTLTQALQSSGVDLSLASISVQIQLGKRANRRPILPT 113
           ++ E ++EGGTI+ISS YSQGLLN LTQALQS+G+DLS ASISVQI LGKR N+     T
Sbjct: 237 QQDEFTVEGGTISISSAYSQGLLNNLTQALQSAGLDLSQASISVQINLGKRGNKGLSCGT 296

Query: 114 SIVKDNEVPCSNQGTTRP--RVSDGEESGQALKKLKTSK 150
           S  K ++ P SN  T         GE+S Q  K++KT K
Sbjct: 297 SSPKHHDNPSSNNQTIAHFRDAGSGEDSDQVQKRMKTYK 335


>Glyma08g28010.1 
          Length = 339

 Score = 72.8 bits (177), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/154 (37%), Positives = 84/154 (54%), Gaps = 16/154 (10%)

Query: 3   NFFNSGRSGGIVNQLPPRMVSDAENIANQPQPQSHNTRLCTSDGAVAA-DKLKEQE-LSI 60
           + F+   S G+  Q     VS+  N+ +  QPQ    +    +  V   D +KEQE L I
Sbjct: 188 DMFDPIVSSGMATQHLQEPVSNV-NMPSHTQPQLWLNKQSKGNYIVPHNDTMKEQEELVI 246

Query: 61  EGGTINISSVYSQGLLNTLTQALQSSGVDLSLASISVQIQLGKRANRRPILPTSIVKDNE 120
           E G+ +ISS YSQG+L++LTQAL SSGVD+S  ++SVQI +G+RAN   I      K +E
Sbjct: 247 ESGSDSISSAYSQGILDSLTQALHSSGVDMSQTNVSVQIDVGRRANSGLIPSAYTSKGHE 306

Query: 121 VPCSNQGTTRPRVS---------DGEESGQALKK 145
               NQ  + P ++         D E+S + L++
Sbjct: 307 ----NQFVSNPAIARSGVDYCNIDSEQSSKRLRQ 336


>Glyma18g51080.1 
          Length = 336

 Score = 66.6 bits (161), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 14/105 (13%)

Query: 51  DKLKEQE-LSIEGGTINISSVYSQGLLNTLTQALQSSGVDLSLASISVQIQLGKRANRRP 109
           D +KEQE L  E G+ +ISS YSQG+L++LTQAL SSGVD+S  ++SVQI +G++ N   
Sbjct: 233 DTMKEQEELVNESGSDSISSAYSQGILDSLTQALHSSGVDMSQTNVSVQIDVGRQENAGL 292

Query: 110 ILPTSIVKDNEVPCSNQGTTRPRVS---------DGEESGQALKK 145
           I   S  K +E    NQ  + P ++         D E+S + L++
Sbjct: 293 IPSASTSKGHE----NQSVSNPAIARSGVDYCNIDSEQSSKRLRQ 333