Jatropha Genome Database

JcCB0297891.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0297891.10 + phase: 0 
         (208 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g18620.1                                                       366   e-102
Glyma12g09750.1                                                       363   e-101
Glyma06g05770.1                                                        57   9e-09
Glyma10g43950.2                                                        51   9e-07

>Glyma11g18620.1 
          Length = 350

 Score =  366 bits (940), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 172/207 (83%), Positives = 190/207 (91%)

Query: 1   MALVPTTQPSSDAPLFAEVDMGGDSSAPIVRATVVQASTVFYDTAATLDKAERLLAEAAG 60
           MALV T    ++ PLFAEVDMG D +AP VRATVVQAST+FYDT ATLDKAERLLAEAA 
Sbjct: 1   MALVTTNPTINEGPLFAEVDMGSDFNAPTVRATVVQASTIFYDTPATLDKAERLLAEAAS 60

Query: 61  HGSQLVVFPEAFVGGYPRGSNFGVSIGFRTSKGREEFRKYHASAIDVPGPEVDRLAAMAG 120
           +GSQLVVFPEAFVGGYPRGS FG+SIG RT+KGREEFRKYH++AIDVPGPEVDRLAAMAG
Sbjct: 61  YGSQLVVFPEAFVGGYPRGSAFGLSIGNRTAKGREEFRKYHSAAIDVPGPEVDRLAAMAG 120

Query: 121 KYKLYLVMGVIERDGYTLYCTILFFDSQGQYLGKHRKLMPTAMERIVWGFGDGSTIPVID 180
           KYK++LVMGVIERDGYTLYCT+LFFDSQG YLGKHRK+MPTA+ER++WGFGDGSTIPV +
Sbjct: 121 KYKVHLVMGVIERDGYTLYCTVLFFDSQGHYLGKHRKIMPTALERVIWGFGDGSTIPVFE 180

Query: 181 TPIGKIGGAICWENRMPLLRTAMYGKG 207
           TP+GKIG AICWENRMPLLRTAMY KG
Sbjct: 181 TPVGKIGAAICWENRMPLLRTAMYAKG 207


>Glyma12g09750.1 
          Length = 350

 Score =  363 bits (931), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 171/207 (82%), Positives = 188/207 (90%)

Query: 1   MALVPTTQPSSDAPLFAEVDMGGDSSAPIVRATVVQASTVFYDTAATLDKAERLLAEAAG 60
           MALV T    ++ PLFAEVDMG D +AP VRATVVQAST+FYDT ATLDKAERLLAEA  
Sbjct: 1   MALVTTNPTINEGPLFAEVDMGSDFNAPTVRATVVQASTIFYDTPATLDKAERLLAEATS 60

Query: 61  HGSQLVVFPEAFVGGYPRGSNFGVSIGFRTSKGREEFRKYHASAIDVPGPEVDRLAAMAG 120
           +GSQLVVFPEAFVGGYPRGS FG+SIG RT KGREEFRKYH++AIDVPGPEVDRLAAMAG
Sbjct: 61  YGSQLVVFPEAFVGGYPRGSAFGLSIGNRTVKGREEFRKYHSAAIDVPGPEVDRLAAMAG 120

Query: 121 KYKLYLVMGVIERDGYTLYCTILFFDSQGQYLGKHRKLMPTAMERIVWGFGDGSTIPVID 180
           KYK++LVMGVIERDGYTLYCT+LFFDSQG YLGKHRK+MPTA+ER++WGFGDGSTIPV +
Sbjct: 121 KYKVHLVMGVIERDGYTLYCTVLFFDSQGHYLGKHRKIMPTALERVIWGFGDGSTIPVFE 180

Query: 181 TPIGKIGGAICWENRMPLLRTAMYGKG 207
           TP+GKIG AICWENRMPLLRTAMY KG
Sbjct: 181 TPVGKIGAAICWENRMPLLRTAMYAKG 207


>Glyma06g05770.1 
          Length = 352

 Score = 57.4 bits (137), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 77/176 (43%), Gaps = 30/176 (17%)

Query: 43  DTAATLDKAERLLAEAAGHGSQLVVFPEAFVGGYPRGSNFGVSIGFRTSKGREEFRKYHA 102
           D  + +  A   + +AA  G+QLV+ PE +   Y   S F V                +A
Sbjct: 85  DKDSNIAHARTAIQDAASKGAQLVLLPEIWNSPYSNDS-FPV----------------YA 127

Query: 103 SAIDV-PGPEVDRLAAMAGKYKLYLVMGVI-ERDGYTLYCTILFFDSQGQYLGKHRKL-- 158
             ID    P    L+ ++   K+ +V G I ER G  LY T   F + G  L KHRK+  
Sbjct: 128 EDIDAGASPSTAMLSELSRLLKITIVGGSIPERSGGLLYNTCCVFGTDGNLLAKHRKIHL 187

Query: 159 ----MP---TAMERIVWGFGDGSTIPVIDTPIGKIGGAICWENRMPLLRTAMYGKG 207
               +P   T +E      G+  TI  +DT +G+IG  IC++ R P L      +G
Sbjct: 188 FDIDIPGKITFIESKTLTAGETPTI--VDTEVGRIGIGICYDIRFPELAMIYAARG 241


>Glyma10g43950.2 
          Length = 311

 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 29/178 (16%)

Query: 30  VRATVVQASTVFYDTAATLDKAERLLAEAAGHGSQLVVFPEAFVGGYPRGSNFGVSIGFR 89
           VR    Q +++  D AA L    RL+ EAA  G++L+ FPEAF               + 
Sbjct: 34  VRVAAAQMTSI-SDLAANLATCSRLIKEAASAGAKLLCFPEAF--------------SYV 78

Query: 90  TSKGREEFRKYHASAIDVPGPEVDRLAAMAGKYKLYLVMGVIERDG---YTLYCTILFFD 146
            +K  +  R   A  +D  GP +    ++A +  ++L +G  +  G     L  T +  D
Sbjct: 79  GTKDGDSVRV--AEPLD--GPIMSHYCSLARESSIWLSLGGFQEKGSDPQRLSNTHVIVD 134

Query: 147 SQGQYLGKHRKL------MPTAMERIVWGFGD-GSTIPVIDTPIGKIGGAICWENRMP 197
             G+ +  + K+      +P         F + G  I  +D+P+G++G ++C++ R P
Sbjct: 135 DTGKIISSYSKIHLFDVDVPGGRVYKESSFTESGKDIVAVDSPVGRLGLSVCYDLRFP 192