Jatropha Genome Database

JcCB0297821.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0297821.10 - phase: 0 /partial
         (252 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g27700.1                                                       210   1e-54
Glyma08g10680.1                                                       205   4e-53
Glyma05g06540.1                                                        86   3e-17
Glyma19g22680.1                                                        67   2e-11

>Glyma05g27700.1 
          Length = 463

 Score =  210 bits (535), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 140/263 (53%), Positives = 158/263 (60%), Gaps = 46/263 (17%)

Query: 1   MALNFSHRPLFPGILPEDNLVSPMRIANGYLVEGIPDK--VDNCFDYGRDRGDRCGSQDS 58
           MALNFSHRP+F     EDNLVSPMR+       GIP+K  VDNCFDYGR+RG       +
Sbjct: 1   MALNFSHRPIFS----EDNLVSPMRM-------GIPEKSVVDNCFDYGRERG----GGGA 45

Query: 59  VHKDILDLLPSDPFGMDISTTFTAITGWLEDLE-VDYGGYGRDQVATSGGNYQLFAGLNF 117
            H DILDLLPSDPFGMDISTT TAITGWLEDLE VDYGGY RD++  S GNYQLFAGLNF
Sbjct: 46  NHDDILDLLPSDPFGMDISTTVTAITGWLEDLEIVDYGGYRRDELGASDGNYQLFAGLNF 105

Query: 118 IWNNAMRFQT--FPGNMGFDNSMNAFRELGNASAHDAGCLEEKEVGDASSHCALGLVCNV 175
           IWNNAMRF         GF  S  + R  G A+              ASS+   G V N 
Sbjct: 106 IWNNAMRFHASCVEEKRGFGESC-SVRNDGAAA--------------ASSNFGFGSVNNY 150

Query: 176 DDILSL------GNEIMGNGDTGAVDERCVEFHESSGVCSDGDGGAPHGAFGFALGYLGV 229
           D++  L      G+ +   G  G  D          G  S G+  APH A  F+LGYLG+
Sbjct: 151 DEVSGLPAISRSGDVVRRVGGAGRGD-----VARPDGGGSGGEELAPHPALSFSLGYLGL 205

Query: 230 RDLLVVETVCRSLRSTVRSDPLL 252
            DLLVVE VC+SL STV  DPLL
Sbjct: 206 SDLLVVERVCKSLHSTVCGDPLL 228


>Glyma08g10680.1 
          Length = 451

 Score =  205 bits (521), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 137/257 (53%), Positives = 153/257 (59%), Gaps = 46/257 (17%)

Query: 1   MALNFSHRPLFPGILPEDNLVSPMRIANGYLVEGIPDK--VDNCFDYGRDRGDRCGSQDS 58
           MALNFSHRP+F     EDNLVSPMR+       GIP+K  V+NCFDYGRDR     S   
Sbjct: 1   MALNFSHRPIFS----EDNLVSPMRM-------GIPEKSVVENCFDYGRDRSGGGAS--- 46

Query: 59  VHKDILDLLPSDPFGMDISTTFTAITGWLEDLE-VDYGGYGRDQVATSGGNYQLFAGLNF 117
            H DILDLLPSDPFGMDISTT TAITGWLEDLE VDYGGY RD++  S GNYQLFAGLNF
Sbjct: 47  -HDDILDLLPSDPFGMDISTTVTAITGWLEDLEIVDYGGYRRDELGASDGNYQLFAGLNF 105

Query: 118 IWNNAMRFQT--FPGNMGFDNSMNAFRELGNASAHDAGCLEEKEVGDASSHCALGLVCNV 175
           IWNNAMRF         GF  S  + R  G A+              AS++   G V N 
Sbjct: 106 IWNNAMRFHASCVEEKRGFGESC-SVRNDGAAA--------------ASNNFGFGSVNNY 150

Query: 176 DDILSLGNEIMGNGDTGAVDERCVEFHESSGVCSDGDGGAPHGAFGFALGYLGVRDLLVV 235
           D++  L     G+GD            E           APH A  F+LGYLG+ DLLVV
Sbjct: 151 DEVSGLP-ATSGSGDVVRRGGGGGGGDEL----------APHPALSFSLGYLGLSDLLVV 199

Query: 236 ETVCRSLRSTVRSDPLL 252
           E VC+SL STVR DPLL
Sbjct: 200 ERVCKSLHSTVRGDPLL 216


>Glyma05g06540.1 
          Length = 439

 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 89/197 (45%), Gaps = 26/197 (13%)

Query: 62  DILDLLPSDPFGMDISTTFTAITGWLEDLEVDYG----GYGRDQVATSGGNYQL--FAGL 115
           D+LD LP DPFGM+I    TA + W+ D E  +      +G D+     G++    F GL
Sbjct: 20  DVLDRLPMDPFGMNI----TAFSDWIGDFEWGFRPEDVEFGVDETHEKIGDHDHLHFLGL 75

Query: 116 NFIWNNAMRFQTFPGNMGFDNSMNAFRELGNASAHDAGCLEEKEVGDASSHCALGLVCNV 175
           ++ WN     Q    N    N M+   ++ N   +     +E  V D S+   L      
Sbjct: 76  SWAWNGPENLQPHKVNAK-GNDMSVSGDVLNGYQNFDVVFDEGIVVDGSTRGFLS----- 129

Query: 176 DDILSLGNEIMGNGDTGAVDERCVEFHESSGVCSDGDGGAPHGAFGFALGYLGVRDLLVV 235
                     + +GD         E    + +  D +GG PH A  F LGYLGVRDLL V
Sbjct: 130 ----------VSHGDYRVQSREVEELRNCTEIECDAEGGVPHDALFFVLGYLGVRDLLSV 179

Query: 236 ETVCRSLRSTVRSDPLL 252
           E VCRSL   VR DPLL
Sbjct: 180 EGVCRSLCDAVRGDPLL 196


>Glyma19g22680.1 
          Length = 415

 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 85/190 (44%), Gaps = 26/190 (13%)

Query: 70  DPFGMDISTTFTAITGWLEDLEVDYG----GYGRDQVATSGGNYQL--FAGLNFIWNNAM 123
           DPFGM+I    TA + W+ED E  +      +  D+     G++    F GL++ +N   
Sbjct: 2   DPFGMNI----TAFSDWIEDFEWGFRPLDVEFEVDETHEKIGDHDHLHFLGLSWDFNGPE 57

Query: 124 RFQTFPGNMGFD-NSMNAFRELGNASAHDAGCLEEKEVGDASSHCALGLVCNVDDILSLG 182
             Q  P  +    N M    ++ N   +     +E  V D S+             LS+ 
Sbjct: 58  NLQ--PQTVDAKGNDMLVSGDVFNGYQNFDVVFDEGIVADGSTR----------GFLSVS 105

Query: 183 NEIMGNGDTGAVDERCVEFHESSGVCSDGDGGAPHGAFGFALGYLGVRDLLVVETVCRSL 242
                +GD     +   E    + +  D +GG PH A  F LGYLGVRDLL VE VC+SL
Sbjct: 106 QR---HGDYRVQSKEAEESRNYTKIECDAEGGFPHDALFFVLGYLGVRDLLSVEGVCKSL 162

Query: 243 RSTVRSDPLL 252
              VR DPLL
Sbjct: 163 CDAVRGDPLL 172