Jatropha Genome Database

JcCB0294291.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0294291.10 - phase: 0 /partial
         (171 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g43640.1                                                        81   5e-16
Glyma11g01830.2                                                        77   1e-14
Glyma11g01830.1                                                        76   1e-14

>Glyma01g43640.1 
          Length = 384

 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/178 (36%), Positives = 83/178 (46%), Gaps = 15/178 (8%)

Query: 1   FYEELVHGKDTSVDLAELPNKPLNKKIKFVYSXXXXXXXXXXXXXXXXXXXXXXXXXXX- 59
           FYEELV G+       ELP+KPLNKKI F  S                            
Sbjct: 64  FYEELVDGE------KELPSKPLNKKITFADSDSSSSDGEEEEEEEEEEEEEEEEAVHDG 117

Query: 60  ------XXXKSDVNQNSDAKSEVPTNEKLSFPNVENTCGANQREEKTKDSEDSGNDLENP 113
                    K D + + +A  +    EK    NV+      Q E KT D++ +  +L+  
Sbjct: 118 DEEKGDKKPKLDTSSDDNASHDDGAGEKSDPHNVDEP--HTQEENKTCDNKGNNGNLKTT 175

Query: 114 TSEAKEPPAKKQCLDTCVSKSTIHEKMEEKSVDKLIEDELKELGDKSKRRFANLDSGC 171
              A + PA KQC  T V      +K+E KS+DKLIE+E KELGDK+KRRF  LDSGC
Sbjct: 176 KGTADDLPAVKQCCKTNVPACNFSDKVEHKSIDKLIEEEFKELGDKNKRRFVKLDSGC 233


>Glyma11g01830.2 
          Length = 377

 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 82/175 (46%), Gaps = 13/175 (7%)

Query: 1   FYEELVHGKDTSVDLAELPNKPLNKKIKFVYSXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           FYEELV G+ +SV   ELP+KPLNKKI F  S                            
Sbjct: 61  FYEELVDGEHSSV--KELPSKPLNKKITFADSDSSSSDDDDDDDEEEEVQEGDEEKGDKK 118

Query: 61  ----XXKSDVNQNSDAKSEVPTNEKLSFPNVENTCGANQREEKTKDSEDSGNDLENPTSE 116
                   D   + D   E     K+  P+        Q  ++T D++ + ++L+     
Sbjct: 119 PKLDTSNDDNTSHDDGVPEKSDPHKVDEPH-------TQEVDETCDNKGANDNLKTTKGT 171

Query: 117 AKEPPAKKQCLDTCVSKSTIHEKMEEKSVDKLIEDELKELGDKSKRRFANLDSGC 171
           A   PA KQC  T V      +K+E+KS+DKLIE+E KELGDK+KR F  LDSGC
Sbjct: 172 ADGLPAVKQCCKTNVPACNFSDKVEQKSIDKLIEEEFKELGDKNKRCFVKLDSGC 226


>Glyma11g01830.1 
          Length = 412

 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 82/175 (46%), Gaps = 13/175 (7%)

Query: 1   FYEELVHGKDTSVDLAELPNKPLNKKIKFVYSXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           FYEELV G+ +SV   ELP+KPLNKKI F  S                            
Sbjct: 96  FYEELVDGEHSSVK--ELPSKPLNKKITFADSDSSSSDDDDDDDEEEEVQEGDEEKGDKK 153

Query: 61  ----XXKSDVNQNSDAKSEVPTNEKLSFPNVENTCGANQREEKTKDSEDSGNDLENPTSE 116
                   D   + D   E     K+  P+        Q  ++T D++ + ++L+     
Sbjct: 154 PKLDTSNDDNTSHDDGVPEKSDPHKVDEPH-------TQEVDETCDNKGANDNLKTTKGT 206

Query: 117 AKEPPAKKQCLDTCVSKSTIHEKMEEKSVDKLIEDELKELGDKSKRRFANLDSGC 171
           A   PA KQC  T V      +K+E+KS+DKLIE+E KELGDK+KR F  LDSGC
Sbjct: 207 ADGLPAVKQCCKTNVPACNFSDKVEQKSIDKLIEEEFKELGDKNKRCFVKLDSGC 261