Jatropha Genome Database

JcCB0293861.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0293861.20 - phase: 0 /partial
         (102 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g42900.1                                                       182   8e-47
Glyma08g16420.1                                                       182   8e-47
Glyma13g27340.1                                                       180   3e-46
Glyma13g41540.1                                                       174   3e-44
Glyma12g13240.1                                                       169   7e-43
Glyma06g44510.1                                                       154   3e-38
Glyma13g37140.1                                                       150   2e-37
Glyma12g33280.1                                                       150   4e-37
Glyma08g05860.1                                                       105   1e-23
Glyma05g33820.1                                                       102   6e-23
Glyma04g05480.1                                                        79   1e-15
Glyma06g05500.1                                                        79   1e-15
Glyma13g27360.1                                                        67   5e-12
Glyma04g05530.1                                                        51   3e-07

>Glyma15g42900.1 
          Length = 389

 Score =  182 bits (461), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 88/99 (88%), Positives = 94/99 (94%)

Query: 3   FQDSFWASFALGWAVTNGAGLASYPIDTVRRRMMMTSGEAVKYKSSFDAFSQIIKNEGAK 62
            QDSF+ASFALGW +TNGAGLASYPIDTVRRRMMMTSGEAVKYKSS DAF+QI+KNEGAK
Sbjct: 290 LQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFTQILKNEGAK 349

Query: 63  SLFKGGGANILRAIAGAGVLAGYDKLQVIAFGKKYGSGG 101
           SLFKG GANILRA+AGAGVLAGYDKLQV+ FGKKYGSGG
Sbjct: 350 SLFKGAGANILRAVAGAGVLAGYDKLQVLVFGKKYGSGG 388


>Glyma08g16420.1 
          Length = 388

 Score =  182 bits (461), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 88/99 (88%), Positives = 94/99 (94%)

Query: 3   FQDSFWASFALGWAVTNGAGLASYPIDTVRRRMMMTSGEAVKYKSSFDAFSQIIKNEGAK 62
            QDSF+ASFALGW +TNGAGLASYPIDTVRRRMMMTSGEAVKYKSS DAF+QI+KNEGAK
Sbjct: 289 LQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFTQILKNEGAK 348

Query: 63  SLFKGGGANILRAIAGAGVLAGYDKLQVIAFGKKYGSGG 101
           SLFKG GANILRA+AGAGVLAGYDKLQV+ FGKKYGSGG
Sbjct: 349 SLFKGAGANILRAVAGAGVLAGYDKLQVLVFGKKYGSGG 387


>Glyma13g27340.1 
          Length = 369

 Score =  180 bits (457), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 88/99 (88%), Positives = 93/99 (93%)

Query: 3   FQDSFWASFALGWAVTNGAGLASYPIDTVRRRMMMTSGEAVKYKSSFDAFSQIIKNEGAK 62
            QDSF+ASF LGW +TNGAGLASYPIDTVRRRMMMTSGEAVKYKSS DAF+QI+KNEGAK
Sbjct: 270 LQDSFFASFGLGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFTQILKNEGAK 329

Query: 63  SLFKGGGANILRAIAGAGVLAGYDKLQVIAFGKKYGSGG 101
           SLFKG GANILRA+AGAGVLAGYDKLQVI FGKKYGSGG
Sbjct: 330 SLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGG 368


>Glyma13g41540.1 
          Length = 395

 Score =  174 bits (440), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 84/99 (84%), Positives = 91/99 (91%)

Query: 3   FQDSFWASFALGWAVTNGAGLASYPIDTVRRRMMMTSGEAVKYKSSFDAFSQIIKNEGAK 62
            QDSF ASFALGW VT GA +ASYP+DTVRRRMMMTSGEAVKYKSSFDAFSQI+KNEG+K
Sbjct: 296 LQDSFLASFALGWMVTIGASIASYPLDTVRRRMMMTSGEAVKYKSSFDAFSQIVKNEGSK 355

Query: 63  SLFKGGGANILRAIAGAGVLAGYDKLQVIAFGKKYGSGG 101
           SLFKG GANILRA+AGAGVL+GYDKLQV+  GKKYGSGG
Sbjct: 356 SLFKGAGANILRAVAGAGVLSGYDKLQVLVLGKKYGSGG 394


>Glyma12g13240.1 
          Length = 371

 Score =  169 bits (427), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 84/100 (84%), Positives = 89/100 (89%)

Query: 2   GFQDSFWASFALGWAVTNGAGLASYPIDTVRRRMMMTSGEAVKYKSSFDAFSQIIKNEGA 61
           G QDSF+ASF LGW +T GAGLASYPIDTVRRRMMMTSGEAVKYKSS  AF  I+ NEGA
Sbjct: 271 GLQDSFFASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQTIVANEGA 330

Query: 62  KSLFKGGGANILRAIAGAGVLAGYDKLQVIAFGKKYGSGG 101
           KSLFKG GANILRA+AGAGVLAGYDKLQ+I FGKKYGSGG
Sbjct: 331 KSLFKGAGANILRAVAGAGVLAGYDKLQLILFGKKYGSGG 370


>Glyma06g44510.1 
          Length = 372

 Score =  154 bits (388), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 75/92 (81%), Positives = 81/92 (88%)

Query: 2   GFQDSFWASFALGWAVTNGAGLASYPIDTVRRRMMMTSGEAVKYKSSFDAFSQIIKNEGA 61
           G QDSF+ASF LGW +T GAGLASYPIDTVRRRMMMTSGEAVKYKSS  AF  I+ NEGA
Sbjct: 271 GLQDSFFASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQTIVANEGA 330

Query: 62  KSLFKGGGANILRAIAGAGVLAGYDKLQVIAF 93
           KSLFKG GANILRA+AGAGVLAGYDKLQ++ F
Sbjct: 331 KSLFKGAGANILRAVAGAGVLAGYDKLQLVLF 362


>Glyma13g37140.1 
          Length = 367

 Score =  150 bits (380), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 74/92 (80%), Positives = 80/92 (86%)

Query: 2   GFQDSFWASFALGWAVTNGAGLASYPIDTVRRRMMMTSGEAVKYKSSFDAFSQIIKNEGA 61
           G QDSF+ASF LGW +T GAGLASYPIDTVRRRMMMTSGEAVKYKSS +AF  I+  EG 
Sbjct: 266 GLQDSFFASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLEAFKIIVAKEGT 325

Query: 62  KSLFKGGGANILRAIAGAGVLAGYDKLQVIAF 93
           KSLFKG GANILRA+AGAGVLAGYDKLQ+I F
Sbjct: 326 KSLFKGAGANILRAVAGAGVLAGYDKLQLILF 357


>Glyma12g33280.1 
          Length = 367

 Score =  150 bits (378), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 73/92 (79%), Positives = 80/92 (86%)

Query: 2   GFQDSFWASFALGWAVTNGAGLASYPIDTVRRRMMMTSGEAVKYKSSFDAFSQIIKNEGA 61
           G QDSF+ASF LGW +T GAGLASYPIDTVRRRMMMTSGEAVKYKSS +AF  I+  EG 
Sbjct: 266 GLQDSFFASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLEAFKIIVAKEGT 325

Query: 62  KSLFKGGGANILRAIAGAGVLAGYDKLQVIAF 93
           KSLFKG GANILRA+AGAGVLAGYDKLQ++ F
Sbjct: 326 KSLFKGAGANILRAVAGAGVLAGYDKLQLVLF 357


>Glyma08g05860.1 
          Length = 314

 Score =  105 bits (262), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 47/90 (52%), Positives = 67/90 (74%)

Query: 3   FQDSFWASFALGWAVTNGAGLASYPIDTVRRRMMMTSGEAVKYKSSFDAFSQIIKNEGAK 62
           F+  F ASF LGW++T  +G+ +YP DT+RRRMM+TSG   KY ++  AF +I++ EG +
Sbjct: 210 FEGKFLASFLLGWSITTFSGVCAYPFDTLRRRMMLTSGHPNKYCTAIHAFQEIVRQEGFR 269

Query: 63  SLFKGGGANILRAIAGAGVLAGYDKLQVIA 92
           +LF+G  AN+L  +AGAGVLAGYD+L  I+
Sbjct: 270 ALFRGVTANMLLGMAGAGVLAGYDQLNRIS 299


>Glyma05g33820.1 
          Length = 314

 Score =  102 bits (255), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 46/90 (51%), Positives = 66/90 (73%)

Query: 3   FQDSFWASFALGWAVTNGAGLASYPIDTVRRRMMMTSGEAVKYKSSFDAFSQIIKNEGAK 62
           F+  F ASF LGW++T  + + +YP DT+RRRMM+TSG   KY ++  AF +I++ EG +
Sbjct: 210 FEGKFLASFFLGWSITTFSAVCAYPFDTLRRRMMLTSGHPNKYCTAIHAFQEIVRQEGFR 269

Query: 63  SLFKGGGANILRAIAGAGVLAGYDKLQVIA 92
           +LF+G  AN+L  +AGAGVLAGYD+L  I+
Sbjct: 270 ALFRGFTANMLLGMAGAGVLAGYDQLNRIS 299


>Glyma04g05480.1 
          Length = 316

 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 53/85 (62%), Gaps = 1/85 (1%)

Query: 6   SFWASFALGWAVTNGAGLASYPIDTVRRRMMMTSG-EAVKYKSSFDAFSQIIKNEGAKSL 64
           + W  + +  AVT  AGL SYP+DTVRRRMMM SG E   Y S+ D + +I + EG  S 
Sbjct: 224 ALWKRWVVAQAVTTSAGLISYPLDTVRRRMMMQSGMEQPVYNSTLDCWRKIYRTEGLASF 283

Query: 65  FKGGGANILRAIAGAGVLAGYDKLQ 89
           ++G  +N+ R+   A +L  YD+++
Sbjct: 284 YRGAVSNVFRSTGAAAILVLYDEVK 308


>Glyma06g05500.1 
          Length = 321

 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 53/85 (62%), Gaps = 1/85 (1%)

Query: 6   SFWASFALGWAVTNGAGLASYPIDTVRRRMMMTSG-EAVKYKSSFDAFSQIIKNEGAKSL 64
           + W  + +  AVT  AGL SYP+DTVRRRMMM SG E   Y S+ D + +I + EG  S 
Sbjct: 229 ALWKRWVVAQAVTTSAGLISYPLDTVRRRMMMQSGIEQPVYNSTLDCWRKIYRTEGLASF 288

Query: 65  FKGGGANILRAIAGAGVLAGYDKLQ 89
           ++G  +N+ R+   A +L  YD+++
Sbjct: 289 YRGAVSNVFRSTGAAAILVLYDEVK 313


>Glyma13g27360.1 
          Length = 305

 Score = 66.6 bits (161), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 30/35 (85%), Positives = 34/35 (97%)

Query: 30  TVRRRMMMTSGEAVKYKSSFDAFSQIIKNEGAKSL 64
           T+RRRMMMTSGEAVKYKSS DAF+QI++NEGAKSL
Sbjct: 271 TIRRRMMMTSGEAVKYKSSMDAFAQILENEGAKSL 305


>Glyma04g05530.1 
          Length = 339

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 6/71 (8%)

Query: 25  SYPIDTVRRRMMMTS-----GEAVKYKSSFDAFSQIIKNEGAKSLFKGGGANILRAIAGA 79
           +YP+D V+R+M + S      E  +YKS+ DA   I++N+G + LF G   N +R +  A
Sbjct: 252 TYPLDVVKRQMQVGSLQNAAHEDARYKSTIDALRMIVRNQGWRQLFHGVSINYIRIVPSA 311

Query: 80  GV-LAGYDKLQ 89
            +    YD ++
Sbjct: 312 AISFTTYDMMK 322