Jatropha Genome Database

JcCB0293691.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0293691.10 - phase: 0 /partial
         (124 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g13320.1                                                       136   4e-33
Glyma10g40140.1                                                       128   1e-30
Glyma05g31630.2                                                        57   5e-09
Glyma05g31630.1                                                        57   5e-09
Glyma08g14850.1                                                        57   5e-09
Glyma05g27360.2                                                        54   4e-08
Glyma05g27360.1                                                        54   5e-08
Glyma08g10340.1                                                        54   5e-08
Glyma11g36000.3                                                        52   1e-07
Glyma11g36000.2                                                        52   1e-07
Glyma11g36000.1                                                        52   1e-07
Glyma18g44250.1                                                        51   3e-07
Glyma08g14850.2                                                        50   8e-07
Glyma01g32090.1                                                        49   9e-07

>Glyma07g13320.1 
          Length = 467

 Score =  136 bits (343), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 63/97 (64%), Positives = 78/97 (80%), Gaps = 1/97 (1%)

Query: 29  ACLNVDVQTTNSVKLNL-KSKEVMEIEAKVLVGTYARNPLVLSSGKGCKLYDPEGREYLD 87
           ACLNVDV   +S K  L K+K+V+E+E K LVGTYAR P+VL  G+GCKLYD EGREYLD
Sbjct: 48  ACLNVDVDAPDSGKTALEKTKDVIEMEGKFLVGTYARTPVVLERGEGCKLYDVEGREYLD 107

Query: 88  CTSGIAVNALGHGDPDWVRAVTEQANLLTHVSNVYYS 124
            ++GIAVNALGHGD DW++AV EQA  LTH SN++++
Sbjct: 108 LSAGIAVNALGHGDADWLKAVVEQAGTLTHTSNIFHT 144


>Glyma10g40140.1 
          Length = 463

 Score =  128 bits (322), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 60/99 (60%), Positives = 75/99 (75%), Gaps = 3/99 (3%)

Query: 29  ACLNVDVQ---TTNSVKLNLKSKEVMEIEAKVLVGTYARNPLVLSSGKGCKLYDPEGREY 85
           ACLNVDV    T N+     K+K+V+E+E   LVGTYAR P+VL  G+GCKLYD EG EY
Sbjct: 42  ACLNVDVDAPNTGNTTSEKKKTKDVIEMEGMYLVGTYARTPVVLERGEGCKLYDVEGNEY 101

Query: 86  LDCTSGIAVNALGHGDPDWVRAVTEQANLLTHVSNVYYS 124
           LD ++GIAVNALGHGD DW++AV EQA  LTH SN++++
Sbjct: 102 LDLSAGIAVNALGHGDADWLKAVVEQAGTLTHTSNIFHT 140


>Glyma05g31630.2 
          Length = 457

 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 36/61 (59%)

Query: 62  YARNPLVLSSGKGCKLYDPEGREYLDCTSGIAVNALGHGDPDWVRAVTEQANLLTHVSNV 121
           Y + PL +  GK   LYD  GR YLD  +GI   + GH  P+ + A+TEQ+ LL H + +
Sbjct: 75  YYKKPLNIVEGKMQYLYDDSGRRYLDAFAGIVTVSCGHCHPEILNAITEQSKLLQHATTI 134

Query: 122 Y 122
           Y
Sbjct: 135 Y 135


>Glyma05g31630.1 
          Length = 477

 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 36/61 (59%)

Query: 62  YARNPLVLSSGKGCKLYDPEGREYLDCTSGIAVNALGHGDPDWVRAVTEQANLLTHVSNV 121
           Y + PL +  GK   LYD  GR YLD  +GI   + GH  P+ + A+TEQ+ LL H + +
Sbjct: 75  YYKKPLNIVEGKMQYLYDDSGRRYLDAFAGIVTVSCGHCHPEILNAITEQSKLLQHATTI 134

Query: 122 Y 122
           Y
Sbjct: 135 Y 135


>Glyma08g14850.1 
          Length = 475

 Score = 56.6 bits (135), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 36/61 (59%)

Query: 62  YARNPLVLSSGKGCKLYDPEGREYLDCTSGIAVNALGHGDPDWVRAVTEQANLLTHVSNV 121
           Y + PL +  GK   LYD  GR YLD  +GI   + GH  P+ + A+TEQ+ LL H + +
Sbjct: 73  YYKKPLNIVEGKMQYLYDDSGRRYLDAFAGIVTVSCGHCHPEILNAITEQSKLLQHATTI 132

Query: 122 Y 122
           Y
Sbjct: 133 Y 133


>Glyma05g27360.2 
          Length = 423

 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%)

Query: 28  RACLNVDVQTTNSVKLNLKSKEVMEIEAKVLVGTYARNPLVLSSGKGCKLYDPEGREYLD 87
           R   +  V T  +   +  S+++++ E +     Y   P+V S  KG  ++DPEG +YLD
Sbjct: 16  RGSRSFGVATEVNASSSSSSQKIIDKEYEHSAHNYHPLPIVFSQAKGTSVWDPEGNKYLD 75

Query: 88  CTSGIAVNALGHGDPDWVRAVTEQANLLTHVSNVYYS 124
             SG +    GH  P  ++A+ EQA  LT  S  +Y+
Sbjct: 76  FLSGYSAVNQGHCHPKILKALQEQAQRLTVSSRAFYN 112


>Glyma05g27360.1 
          Length = 469

 Score = 53.5 bits (127), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%)

Query: 28  RACLNVDVQTTNSVKLNLKSKEVMEIEAKVLVGTYARNPLVLSSGKGCKLYDPEGREYLD 87
           R   +  V T  +   +  S+++++ E +     Y   P+V S  KG  ++DPEG +YLD
Sbjct: 16  RGSRSFGVATEVNASSSSSSQKIIDKEYEHSAHNYHPLPIVFSQAKGTSVWDPEGNKYLD 75

Query: 88  CTSGIAVNALGHGDPDWVRAVTEQANLLTHVSNVYYS 124
             SG +    GH  P  ++A+ EQA  LT  S  +Y+
Sbjct: 76  FLSGYSAVNQGHCHPKILKALQEQAQRLTVSSRAFYN 112


>Glyma08g10340.1 
          Length = 467

 Score = 53.5 bits (127), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 47/90 (52%)

Query: 35  VQTTNSVKLNLKSKEVMEIEAKVLVGTYARNPLVLSSGKGCKLYDPEGREYLDCTSGIAV 94
           +     V  +  S+++++ E +     Y   P+V +  KG  ++DPEG +YLD  SG + 
Sbjct: 21  IGVATEVNASSSSQKIIDKEYEHSAHNYHPLPIVFAQAKGTSVWDPEGNKYLDFLSGYSA 80

Query: 95  NALGHGDPDWVRAVTEQANLLTHVSNVYYS 124
              GH  P  ++A+ EQA  LT  S  +Y+
Sbjct: 81  VNQGHCHPKILKALQEQAERLTVSSRAFYN 110


>Glyma11g36000.3 
          Length = 473

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/61 (37%), Positives = 35/61 (57%)

Query: 62  YARNPLVLSSGKGCKLYDPEGREYLDCTSGIAVNALGHGDPDWVRAVTEQANLLTHVSNV 121
           + + PL +  GK   L+D  GR YLD  +GI   + GH  P+ + A+ EQ+ LL H + +
Sbjct: 71  FYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTISCGHCHPEVLNAIMEQSKLLQHTTTI 130

Query: 122 Y 122
           Y
Sbjct: 131 Y 131


>Glyma11g36000.2 
          Length = 461

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/61 (37%), Positives = 35/61 (57%)

Query: 62  YARNPLVLSSGKGCKLYDPEGREYLDCTSGIAVNALGHGDPDWVRAVTEQANLLTHVSNV 121
           + + PL +  GK   L+D  GR YLD  +GI   + GH  P+ + A+ EQ+ LL H + +
Sbjct: 71  FYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTISCGHCHPEVLNAIMEQSKLLQHTTTI 130

Query: 122 Y 122
           Y
Sbjct: 131 Y 131


>Glyma11g36000.1 
          Length = 473

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/61 (37%), Positives = 35/61 (57%)

Query: 62  YARNPLVLSSGKGCKLYDPEGREYLDCTSGIAVNALGHGDPDWVRAVTEQANLLTHVSNV 121
           + + PL +  GK   L+D  GR YLD  +GI   + GH  P+ + A+ EQ+ LL H + +
Sbjct: 71  FYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTISCGHCHPEVLNAIMEQSKLLQHTTTI 130

Query: 122 Y 122
           Y
Sbjct: 131 Y 131


>Glyma18g44250.1 
          Length = 494

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 33/59 (55%)

Query: 64  RNPLVLSSGKGCKLYDPEGREYLDCTSGIAVNALGHGDPDWVRAVTEQANLLTHVSNVY 122
           ++PL +  GK   L+D +GR YLD   GIA    GH  PD V A+ EQ   L H + +Y
Sbjct: 94  KSPLNVVEGKRQYLFDDKGRRYLDAFGGIATVCCGHCHPDVVEAIVEQTKRLQHSTVLY 152


>Glyma08g14850.2 
          Length = 391

 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 29/46 (63%)

Query: 77  LYDPEGREYLDCTSGIAVNALGHGDPDWVRAVTEQANLLTHVSNVY 122
           LYD  GR YLD  +GI   + GH  P+ + A+TEQ+ LL H + +Y
Sbjct: 4   LYDDSGRRYLDAFAGIVTVSCGHCHPEILNAITEQSKLLQHATTIY 49


>Glyma01g32090.1 
          Length = 475

 Score = 49.3 bits (116), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 33/61 (54%)

Query: 62  YARNPLVLSSGKGCKLYDPEGREYLDCTSGIAVNALGHGDPDWVRAVTEQANLLTHVSNV 121
           + +NP+ +  GK   L+D +GR Y+D   GIA    GH  PD V A+  Q   L H + +
Sbjct: 73  FYKNPVNIVEGKKQYLFDEKGRRYVDAFGGIATVCCGHCHPDVVEAIVNQTKKLQHSTVL 132

Query: 122 Y 122
           Y
Sbjct: 133 Y 133