Jatropha Genome Database

JcCB0293391.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0293391.10 - phase: 0 /partial
         (347 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g29120.1                                                       148   7e-36
Glyma16g33660.1                                                       139   4e-33
Glyma10g04110.1                                                        91   2e-18
Glyma06g06590.1                                                        89   7e-18
Glyma13g18290.1                                                        88   1e-17
Glyma16g33660.2                                                        82   6e-16
Glyma11g22530.1                                                        65   9e-11

>Glyma09g29120.1 
          Length = 539

 Score =  148 bits (374), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 108/319 (33%), Positives = 157/319 (49%), Gaps = 31/319 (9%)

Query: 12  RKFSYGHLAQLKYLLHEAIQIDKILVHDKKTLCMKPEMEITLVFNEIEGHHEQSDFIALH 71
           R+FS+ HLAQ+KY+L +++ IDK+LVHDKK+LCM P+M+ITL F  ++    +SD +AL 
Sbjct: 96  REFSHAHLAQMKYILPKSVCIDKVLVHDKKSLCMVPDMKITLRFEVVKDCSGESDDLALR 155

Query: 72  QLFASRLTNYFTVHPEACDIPEAILPDPFNQSK-RTAFGGEVSDIPEVKLPEPVSQSQTF 130
           + F S+L ++F +HPE  DIPEA LP+PF +   R  F                   + F
Sbjct: 156 RYFKSKLIDFFDMHPEVADIPEAPLPEPFGKKTCRLNF-------------------EEF 196

Query: 131 ATEQLLANASTEDLPTTVESEPPSKSSHMHPSFSRHFSEKIITEKDKTQXXXXXXXXXXX 190
             +    N+STE L  + ++E   +   ++PSF RHFS K  T++ +             
Sbjct: 197 TGQSPHVNSSTELLSISNQTEMLPEQLQLYPSFRRHFSRKNNTDQAEKAQCFLPTKTSPS 256

Query: 191 XXNMKNQDTEISKTTEHPDPSSKSDSETNLNTKYEQGKESPGTNSTSTTIHPIL----VQ 246
                  D E S+ T   +     D   N  T+    KE     S S ++ P      VQ
Sbjct: 257 SHASDCLDNEESEKTLQKECVPLFDGVANPITERGHQKE-----SFSMSLQPSFINTPVQ 311

Query: 247 AINPQFSIDNNACGSP-MWKLASSADNLMVETPAQSTPKRATPLSDDNHXXXXXXXXXXX 305
            I P +S+  +   SP M  ++  AD+ + ETPAQS P R  P+SD              
Sbjct: 312 MIRPPYSVTCSNSESPDMKNISCVADSFIAETPAQSAPARLLPISDVKLQDMPTQKSTSS 371

Query: 306 XCTAAKRSLDFSLLEGNES 324
               AKR LDFSL+  N+ 
Sbjct: 372 H-KPAKRVLDFSLMGDNDG 389


>Glyma16g33660.1 
          Length = 1321

 Score =  139 bits (350), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 106/319 (33%), Positives = 157/319 (49%), Gaps = 16/319 (5%)

Query: 12   RKFSYGHLAQLKYLLHEAIQIDKILVHDKKTLCMKPEMEITLVFNEIEGHHEQSDFIALH 71
            RKFS+ HLAQ+KY+L +++ IDK+LVHDKK+LCM  +M+ITL F  ++    +S  +AL 
Sbjct: 863  RKFSHAHLAQMKYILPKSVCIDKVLVHDKKSLCMVTDMKITLKFEVVKDCSGESADLALR 922

Query: 72   QLFASRLTNYFTVHPEACDIPEAILPDPFNQSKRTAFGGEVSDIPEVKLPEPVSQSQTFA 131
            + F S+L ++F +HPE  DIPEA LP+PF    + +      D          S  + F 
Sbjct: 923  RYFKSKLIDFFDMHPEVADIPEAPLPEPFG---KKSCRSNCKD----------SHVEEFT 969

Query: 132  TEQLLANASTEDLPTTVESEPPSKSSHMHPSFSRHFSEKIITEKDKTQXXXXXXXXXXXX 191
             +    N+STE    + ++E   +   ++PSFSRHFS K  T++ +              
Sbjct: 970  GQSPHVNSSTELFSISNQTEMLPEQLQLYPSFSRHFSRKNNTDQAEKAQCFLPTKTSPSS 1029

Query: 192  XNMKNQDTEISKTTEHPDPSSKSDSETNLNTKYEQGKESPGTNSTSTTIHPILVQAINPQ 251
                  D E S+ T   +     D   N   +    KES   +   + I+   V  I+P 
Sbjct: 1030 HAFDFLDNEESEKTLQKECVPLYDDVANPIMERGHQKESFSMSFEPSVIN-TPVHMIHPP 1088

Query: 252  FSIDNNACGSPMWK-LASSADNLMVETPAQSTPKRATPLSDDNHXXXXXXXXXXXXCTAA 310
             S+  +   SP  K ++ +AD+ + ETPAQS P R  P+SD                  A
Sbjct: 1089 HSVTCSDSESPYLKNISCAADSFIAETPAQSAPARLLPISDVK-LQDMPTQKSTSSYKPA 1147

Query: 311  KRSLDFSLLEGNESACCEF 329
            KR LDFSL+E N+    E 
Sbjct: 1148 KRVLDFSLMEDNDGLGIEV 1166


>Glyma10g04110.1 
          Length = 596

 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/166 (34%), Positives = 95/166 (57%), Gaps = 20/166 (12%)

Query: 12  RKFSYGHLAQLKYLLHEAIQIDKILVHDKKTLCMKPEMEITLVFNEIEGHHE----QSDF 67
           R+F++ HLAQLK++L  AI + K LV D++T CMKP++ I+L  + +E        Q   
Sbjct: 156 RRFTHSHLAQLKFILPNAIVLKKHLVLDERTSCMKPDIHISLDPDAVEADDAKLPPQRGR 215

Query: 68  IALHQLFASRLTNYFTVHPEACDIPEAILPDPFNQSKRTAFGGEVSDIPEVKLPEPVSQS 127
           ++L ++F +RL ++   HPE  +IPE  LP+PFN+ K+ +    V D+ E +LP  +   
Sbjct: 216 VSLKKVFRARLRDFCESHPEGDEIPEGTLPEPFNRPKKDS----VLDMLETRLPTKLPPC 271

Query: 128 QTFATEQLLANASTEDLP--------TTVE--SEPPSKSSHMHPSF 163
             ++   ++ NA + +L         T+VE  +E  +  SHM PSF
Sbjct: 272 MRYS--DIVNNAESANLDEKLSVLVNTSVELPNEHLAAPSHMSPSF 315


>Glyma06g06590.1 
          Length = 394

 Score = 89.0 bits (219), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 67/99 (67%), Gaps = 2/99 (2%)

Query: 8   IFFFRKFSYGHLAQLKYLLHEAIQIDKILVHDKKTLCMKPEMEITLVFNEIEGHHEQSDF 67
           +F  RKFS+ HLAQ+KY+L +++ ID++LVHDKK+LC+ P+M+ITL F  ++    +S  
Sbjct: 84  MFAARKFSHAHLAQMKYILPKSVYIDRVLVHDKKSLCVVPDMKITLKFEVVKDCFGESAD 143

Query: 68  IALHQLFASRLTNYFTVHPEACDIPEAILPDPFNQSKRT 106
           +AL + F S+L ++F +HPE  D+P       +  +KR 
Sbjct: 144 LALRRYFKSKLIDFFDMHPE--DMPTQKSTSSYKPAKRV 180


>Glyma13g18290.1 
          Length = 513

 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 65/98 (66%), Gaps = 4/98 (4%)

Query: 12  RKFSYGHLAQLKYLLHEAIQIDKILVHDKKTLCMKPEMEITLVFNEIEGHHE----QSDF 67
           R+F++ HLAQLK++L +AI + K LV D++T CMKP++ I+L  + +E        Q   
Sbjct: 158 RRFTHSHLAQLKFILRKAIVLRKHLVLDERTSCMKPDIHISLDPDAVEADAAKLPPQGGR 217

Query: 68  IALHQLFASRLTNYFTVHPEACDIPEAILPDPFNQSKR 105
           ++L ++F +RL  ++  HPE  +IPE  LP+PFN+ K+
Sbjct: 218 VSLKKVFRARLKEFWESHPEGDEIPEGTLPEPFNRQKK 255


>Glyma16g33660.2 
          Length = 116

 Score = 82.4 bits (202), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 38/76 (50%), Positives = 57/76 (75%)

Query: 12  RKFSYGHLAQLKYLLHEAIQIDKILVHDKKTLCMKPEMEITLVFNEIEGHHEQSDFIALH 71
           RKFS+ HLAQ+KY+L +++ IDK+LVHDKK+LCM  +M+ITL F  ++    +S  +AL 
Sbjct: 41  RKFSHAHLAQMKYILPKSVCIDKVLVHDKKSLCMVTDMKITLKFEVVKDCSGESADLALR 100

Query: 72  QLFASRLTNYFTVHPE 87
           + F S+L ++F +HPE
Sbjct: 101 RYFKSKLIDFFDMHPE 116


>Glyma11g22530.1 
          Length = 236

 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 27/44 (61%), Positives = 39/44 (88%)

Query: 12  RKFSYGHLAQLKYLLHEAIQIDKILVHDKKTLCMKPEMEITLVF 55
           +KFS+ HLAQ+KY+L +++ ID++LVHDKK+LCM P+M+ITL F
Sbjct: 68  KKFSHAHLAQMKYILPKSVCIDRVLVHDKKSLCMVPDMKITLKF 111