Jatropha Genome Database

JcCB0289761.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0289761.10 - phase: 0 
         (189 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g14010.1                                                       248   2e-66
Glyma18g44940.1                                                       111   4e-25
Glyma09g40890.1                                                       107   6e-24

>Glyma02g14010.1 
          Length = 192

 Score =  248 bits (634), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 125/192 (65%), Positives = 148/192 (77%), Gaps = 4/192 (2%)

Query: 1   MLLRGIISNXX--XXXXXXXXXXXXXYAPTASTMTVTNKY--SISDDDLQSRGFLLRRTI 56
           MLLRG IS                   A  +S+ +    Y  S+SD  L+SRGF LRR  
Sbjct: 1   MLLRGAISTPLPPSLRLRASPAARRTVAVASSSPSGGGDYPLSVSDTALESRGFSLRRGA 60

Query: 57  SDLNLDHLNSIFVAVGFPKRDPERIKLALENTNSLLWIEHKKTQKPVAFARATGDNVFNA 116
             L+L+ LNS+F AVGFP+RDPE+I++ALE+T ++LW+EH+KT++PVAFARATGD VFNA
Sbjct: 61  EGLDLELLNSVFAAVGFPRRDPEKIRVALEHTEAVLWVEHRKTRRPVAFARATGDGVFNA 120

Query: 117 IIWDVVVDPSYQGIGLGKAVMERLVDELLEKGIINIALYSEPRVLGFYRPLGFVADPDGI 176
           IIWDVVVDPS+QGIGLGKAV+ERL+ EL  KGI NIALYSEPRVLGFYRPLGFVADPDGI
Sbjct: 121 IIWDVVVDPSFQGIGLGKAVIERLLRELRGKGISNIALYSEPRVLGFYRPLGFVADPDGI 180

Query: 177 RGMVYSKKQKKK 188
           RGMVYS+KQKKK
Sbjct: 181 RGMVYSRKQKKK 192


>Glyma18g44940.1 
          Length = 217

 Score =  111 bits (278), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 58/133 (43%), Positives = 89/133 (66%), Gaps = 9/133 (6%)

Query: 58  DLNLDHLNSIFVAVGFPKRDPERIKLALENT---NSLLWI------EHKKTQKPVAFARA 108
           D+++  L ++   VG+P+R   ++  AL+N+    SL  I      E  + ++ +  ARA
Sbjct: 81  DVDVYDLQALCDKVGWPRRPLSKLAAALKNSYIVASLHSIRKSHGSEGNEQKRLIGMARA 140

Query: 109 TGDNVFNAIIWDVVVDPSYQGIGLGKAVMERLVDELLEKGIINIALYSEPRVLGFYRPLG 168
           T D+ FNA IWDV+VDP YQG GLGKA++E+L+  LL++ I NI L+++ +V+ FYR LG
Sbjct: 141 TSDHAFNATIWDVLVDPGYQGQGLGKALIEKLIRTLLQRDIGNITLFADSQVVEFYRNLG 200

Query: 169 FVADPDGIRGMVY 181
           F ADP+GI+GM +
Sbjct: 201 FEADPEGIKGMFW 213


>Glyma09g40890.1 
          Length = 262

 Score =  107 bits (268), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 55/119 (46%), Positives = 81/119 (68%), Gaps = 9/119 (7%)

Query: 72  GFPKRDPERIKLALENT---NSLLWI------EHKKTQKPVAFARATGDNVFNAIIWDVV 122
           G+P+R   ++  AL+N+    SL  I      E  + ++ +  ARAT D+ FNA IWDV+
Sbjct: 140 GWPRRPLSKLAAALKNSYIVASLHSIRKSPGSEGNEQKRLIGMARATSDHAFNATIWDVL 199

Query: 123 VDPSYQGIGLGKAVMERLVDELLEKGIINIALYSEPRVLGFYRPLGFVADPDGIRGMVY 181
           VDP YQG GLGKA++E+L+  LL++ I NI L+++ +V+ FYR LGF ADP+GI+GM +
Sbjct: 200 VDPGYQGQGLGKALIEKLIRTLLQRDIGNITLFADSQVVEFYRNLGFEADPEGIKGMFW 258