Jatropha Genome Database

JcCB0288881.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0288881.10 - phase: 0 /partial
         (160 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g07250.2                                                       129   1e-30
Glyma11g07250.1                                                       129   1e-30
Glyma01g38200.1                                                       129   2e-30
Glyma01g38200.2                                                       129   2e-30
Glyma02g06400.1                                                       125   2e-29
Glyma11g18250.1                                                        54   8e-08

>Glyma11g07250.2 
          Length = 543

 Score =  129 bits (324), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 58/67 (86%), Positives = 62/67 (92%)

Query: 93  GSCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQ 152
           G+CQGVIALNMEDGTLHRF+AASTILATGGYGRAYFSATSAHTCTGDGNAMVARAG+PL+
Sbjct: 127 GTCQGVIALNMEDGTLHRFKAASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGIPLE 186

Query: 153 ILSLFNF 159
            L    F
Sbjct: 187 DLEFVQF 193


>Glyma11g07250.1 
          Length = 630

 Score =  129 bits (324), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 58/67 (86%), Positives = 62/67 (92%)

Query: 93  GSCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQ 152
           G+CQGVIALNMEDGTLHRF+AASTILATGGYGRAYFSATSAHTCTGDGNAMVARAG+PL+
Sbjct: 214 GTCQGVIALNMEDGTLHRFKAASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGIPLE 273

Query: 153 ILSLFNF 159
            L    F
Sbjct: 274 DLEFVQF 280


>Glyma01g38200.1 
          Length = 630

 Score =  129 bits (323), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 58/67 (86%), Positives = 62/67 (92%)

Query: 93  GSCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQ 152
           G+CQGVIALNMEDGTLHRF+AASTILATGGYGRAYFSATSAHTCTGDGNAMVARAG+PL+
Sbjct: 214 GTCQGVIALNMEDGTLHRFQAASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGIPLE 273

Query: 153 ILSLFNF 159
            L    F
Sbjct: 274 DLEFVQF 280


>Glyma01g38200.2 
          Length = 544

 Score =  129 bits (323), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 58/67 (86%), Positives = 62/67 (92%)

Query: 93  GSCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQ 152
           G+CQGVIALNMEDGTLHRF+AASTILATGGYGRAYFSATSAHTCTGDGNAMVARAG+PL+
Sbjct: 214 GTCQGVIALNMEDGTLHRFQAASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGIPLE 273

Query: 153 ILSLFNF 159
            L    F
Sbjct: 274 DLEFVQF 280


>Glyma02g06400.1 
          Length = 634

 Score =  125 bits (314), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 56/67 (83%), Positives = 61/67 (91%)

Query: 93  GSCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQ 152
           G+CQGVIALNMEDGTLH F+A+STILATGGYGRAYFSATSAHTCTGDGNAMVARAG+PL+
Sbjct: 218 GTCQGVIALNMEDGTLHHFQASSTILATGGYGRAYFSATSAHTCTGDGNAMVARAGIPLE 277

Query: 153 ILSLFNF 159
            L    F
Sbjct: 278 DLEFVQF 284


>Glyma11g18250.1 
          Length = 457

 Score = 53.5 bits (127), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 23/25 (92%), Positives = 25/25 (100%)

Query: 95  CQGVIALNMEDGTLHRFRAASTILA 119
           CQG+IALNMEDGTLHRF+AASTILA
Sbjct: 55  CQGMIALNMEDGTLHRFKAASTILA 79