Jatropha Genome Database

JcCB0288671.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0288671.10 - phase: 0 /pseudo
         (255 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g11980.1                                                       271   7e-73
Glyma04g42790.1                                                       268   3e-72
Glyma04g42550.4                                                       146   2e-35
Glyma04g42550.3                                                       146   2e-35
Glyma04g42550.1                                                       145   3e-35
Glyma06g12210.1                                                       145   3e-35
Glyma04g42550.2                                                       145   4e-35
Glyma17g13990.1                                                       136   3e-32
Glyma05g03440.1                                                       136   3e-32
Glyma05g03440.2                                                       135   3e-32
Glyma04g42550.5                                                       114   1e-25
Glyma16g22000.1                                                        89   3e-18
Glyma15g38330.1                                                        67   1e-11

>Glyma06g11980.1 
          Length = 361

 Score =  271 bits (692), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 133/171 (77%), Positives = 139/171 (81%), Gaps = 1/171 (0%)

Query: 27  NKGKNVVVAGTPPDI-KAVPWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGP 85
           +KGK+VV AG PP   KA+PWVEKYRPQSL DVAAHRDIVDTIDRLT+ENRLPHLLLYGP
Sbjct: 20  DKGKSVVFAGNPPAAGKAIPWVEKYRPQSLDDVAAHRDIVDTIDRLTTENRLPHLLLYGP 79

Query: 86  PGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIGVVRQQIXXXXXXXXXXXXXXXXX 145
           PGTGKTSTILAVARKLYG+QY NMILELNASDDRGI VVRQQI                 
Sbjct: 80  PGTGKTSTILAVARKLYGSQYQNMILELNASDDRGIDVVRQQIQDFASTQSLSFGVKSSV 139

Query: 146 XXXXXXEADAMTKDAQFALRRVIEKYTKNTRFTLICNHVNKIIPALQSRCT 196
                 EADAMTKDAQFALRRVIEKYTK+TRF LICNHVNKIIPALQSRCT
Sbjct: 140 KLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCT 190


>Glyma04g42790.1 
          Length = 363

 Score =  268 bits (686), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 138/197 (70%), Positives = 146/197 (74%), Gaps = 6/197 (3%)

Query: 1   MNEKESFMDIDGDENEDQKQNDSYETNKGKNVVVAGTPPDI-KAVPWVEKYRPQSLADVA 59
           M E    MDID D++    + D     K K+VVVA  P    KA+PWVEKYRP SL DVA
Sbjct: 1   MAETNHHMDIDSDDHTYTARPD-----KAKSVVVASNPAAAGKAIPWVEKYRPLSLDDVA 55

Query: 60  AHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDR 119
           AHRDIVDTIDRLT+ENRLPHLLLYGPPGTGKTSTILAVARKLYG+QY NMILELNASDDR
Sbjct: 56  AHRDIVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYQNMILELNASDDR 115

Query: 120 GIGVVRQQIXXXXXXXXXXXXXXXXXXXXXXXEADAMTKDAQFALRRVIEKYTKNTRFTL 179
           GI VVRQQI                       EADAMTKDAQFALRRVIEKYTK+TRF L
Sbjct: 116 GIDVVRQQIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFAL 175

Query: 180 ICNHVNKIIPALQSRCT 196
           ICNHVNKIIPALQSRCT
Sbjct: 176 ICNHVNKIIPALQSRCT 192


>Glyma04g42550.4 
          Length = 342

 Score =  146 bits (368), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 74/157 (47%), Positives = 95/157 (60%), Gaps = 6/157 (3%)

Query: 45  PWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGA 104
           PWVEKYRP+ + DVA   ++V  +         PH+L YGPPGTGKT+T LA+A +L+G 
Sbjct: 10  PWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIAHQLFGP 69

Query: 105 Q-YHNMILELNASDDRGIGVVRQQIXXXXXXXXXXXXXXX-----XXXXXXXXEADAMTK 158
           + Y + +LELNASDDRGI VVR +I                            EAD+MT+
Sbjct: 70  ELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRKSGYPCPPFKIIVLDEADSMTE 129

Query: 159 DAQFALRRVIEKYTKNTRFTLICNHVNKIIPALQSRC 195
           DAQ ALRR +E Y+K TRF  ICN+V++II  L SRC
Sbjct: 130 DAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRC 166


>Glyma04g42550.3 
          Length = 342

 Score =  146 bits (368), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 74/157 (47%), Positives = 95/157 (60%), Gaps = 6/157 (3%)

Query: 45  PWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGA 104
           PWVEKYRP+ + DVA   ++V  +         PH+L YGPPGTGKT+T LA+A +L+G 
Sbjct: 10  PWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIAHQLFGP 69

Query: 105 Q-YHNMILELNASDDRGIGVVRQQIXXXXXXXXXXXXXXX-----XXXXXXXXEADAMTK 158
           + Y + +LELNASDDRGI VVR +I                            EAD+MT+
Sbjct: 70  ELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRKSGYPCPPFKIIVLDEADSMTE 129

Query: 159 DAQFALRRVIEKYTKNTRFTLICNHVNKIIPALQSRC 195
           DAQ ALRR +E Y+K TRF  ICN+V++II  L SRC
Sbjct: 130 DAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRC 166


>Glyma04g42550.1 
          Length = 364

 Score =  145 bits (367), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 74/157 (47%), Positives = 95/157 (60%), Gaps = 6/157 (3%)

Query: 45  PWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGA 104
           PWVEKYRP+ + DVA   ++V  +         PH+L YGPPGTGKT+T LA+A +L+G 
Sbjct: 10  PWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIAHQLFGP 69

Query: 105 Q-YHNMILELNASDDRGIGVVRQQIXXXXXXXXXXXXXXX-----XXXXXXXXEADAMTK 158
           + Y + +LELNASDDRGI VVR +I                            EAD+MT+
Sbjct: 70  ELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRKSGYPCPPFKIIVLDEADSMTE 129

Query: 159 DAQFALRRVIEKYTKNTRFTLICNHVNKIIPALQSRC 195
           DAQ ALRR +E Y+K TRF  ICN+V++II  L SRC
Sbjct: 130 DAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRC 166


>Glyma06g12210.1 
          Length = 342

 Score =  145 bits (367), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 74/158 (46%), Positives = 95/158 (60%), Gaps = 6/158 (3%)

Query: 45  PWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGA 104
           PWVEKYRP+ + DVA   ++V  +         PH+L YGPPGTGKT+T LA+A +L+G 
Sbjct: 10  PWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIAHQLFGP 69

Query: 105 Q-YHNMILELNASDDRGIGVVRQQIXXXXXXXXXXXXXXX-----XXXXXXXXEADAMTK 158
           + Y + +LELNASDDRGI VVR +I                            EAD+MT+
Sbjct: 70  ELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQCKNGYPCPPFKIIVLDEADSMTE 129

Query: 159 DAQFALRRVIEKYTKNTRFTLICNHVNKIIPALQSRCT 196
           DAQ ALRR +E Y+K TRF  ICN+V++II  L SRC 
Sbjct: 130 DAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCA 167


>Glyma04g42550.2 
          Length = 294

 Score =  145 bits (366), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 74/157 (47%), Positives = 95/157 (60%), Gaps = 6/157 (3%)

Query: 45  PWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGA 104
           PWVEKYRP+ + DVA   ++V  +         PH+L YGPPGTGKT+T LA+A +L+G 
Sbjct: 10  PWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIAHQLFGP 69

Query: 105 Q-YHNMILELNASDDRGIGVVRQQIXXXXXXXXXXXXXXX-----XXXXXXXXEADAMTK 158
           + Y + +LELNASDDRGI VVR +I                            EAD+MT+
Sbjct: 70  ELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRKSGYPCPPFKIIVLDEADSMTE 129

Query: 159 DAQFALRRVIEKYTKNTRFTLICNHVNKIIPALQSRC 195
           DAQ ALRR +E Y+K TRF  ICN+V++II  L SRC
Sbjct: 130 DAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRC 166


>Glyma17g13990.1 
          Length = 332

 Score =  136 bits (342), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 72/156 (46%), Positives = 91/156 (58%), Gaps = 3/156 (1%)

Query: 44  VPWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYG 103
           VPWVEKYRP  +AD+  + D V  +  +  +  +P+L+L GPPGTGKT++ILA+A +L G
Sbjct: 13  VPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLG 72

Query: 104 A-QYHNMILELNASDDRGIGVVRQQIXXXXXXXXXXXXXXXXXXXXXXXEADAMTKDAQF 162
                  +LELNASDDRGI VVR +I                       EAD+MT  AQ 
Sbjct: 73  GPNCKEAVLELNASDDRGIDVVRNKI--KMFAQKKVTLTPGRHKIVILDEADSMTTGAQQ 130

Query: 163 ALRRVIEKYTKNTRFTLICNHVNKIIPALQSRCTTV 198
           ALRR +E Y+  TRF L CN   KII  +QSRC  V
Sbjct: 131 ALRRTMEIYSNTTRFALACNTSAKIIEPIQSRCAIV 166


>Glyma05g03440.1 
          Length = 331

 Score =  136 bits (342), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 72/156 (46%), Positives = 91/156 (58%), Gaps = 3/156 (1%)

Query: 44  VPWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYG 103
           VPWVEKYRP  +AD+  + D V  +  +  +  +P+L+L GPPGTGKT++ILA+A +L G
Sbjct: 12  VPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLG 71

Query: 104 A-QYHNMILELNASDDRGIGVVRQQIXXXXXXXXXXXXXXXXXXXXXXXEADAMTKDAQF 162
                  +LELNASDDRGI VVR +I                       EAD+MT  AQ 
Sbjct: 72  GPNCKEAVLELNASDDRGIDVVRNKI--KMFAQKKVTLTPGRHKIVILDEADSMTTGAQQ 129

Query: 163 ALRRVIEKYTKNTRFTLICNHVNKIIPALQSRCTTV 198
           ALRR +E Y+  TRF L CN   KII  +QSRC  V
Sbjct: 130 ALRRTMEIYSNTTRFALACNTSAKIIEPIQSRCAIV 165


>Glyma05g03440.2 
          Length = 302

 Score =  135 bits (341), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 72/156 (46%), Positives = 91/156 (58%), Gaps = 3/156 (1%)

Query: 44  VPWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYG 103
           VPWVEKYRP  +AD+  + D V  +  +  +  +P+L+L GPPGTGKT++ILA+A +L G
Sbjct: 12  VPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLG 71

Query: 104 A-QYHNMILELNASDDRGIGVVRQQIXXXXXXXXXXXXXXXXXXXXXXXEADAMTKDAQF 162
                  +LELNASDDRGI VVR +I                       EAD+MT  AQ 
Sbjct: 72  GPNCKEAVLELNASDDRGIDVVRNKI--KMFAQKKVTLTPGRHKIVILDEADSMTTGAQQ 129

Query: 163 ALRRVIEKYTKNTRFTLICNHVNKIIPALQSRCTTV 198
           ALRR +E Y+  TRF L CN   KII  +QSRC  V
Sbjct: 130 ALRRTMEIYSNTTRFALACNTSAKIIEPIQSRCAIV 165


>Glyma04g42550.5 
          Length = 298

 Score =  114 bits (285), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 60/122 (49%), Positives = 76/122 (62%), Gaps = 6/122 (4%)

Query: 80  LLLYGPPGTGKTSTILAVARKLYGAQ-YHNMILELNASDDRGIGVVRQQIXXXXXXXXXX 138
           +L YGPPGTGKT+T LA+A +L+G + Y + +LELNASDDRGI VVR +I          
Sbjct: 1   MLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGT 60

Query: 139 XXXXXX-----XXXXXXXEADAMTKDAQFALRRVIEKYTKNTRFTLICNHVNKIIPALQS 193
                             EAD+MT+DAQ ALRR +E Y+K TRF  ICN+V++II  L S
Sbjct: 61  NQRKSGYPCPPFKIIVLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLAS 120

Query: 194 RC 195
           RC
Sbjct: 121 RC 122


>Glyma16g22000.1 
          Length = 119

 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 61/86 (70%), Gaps = 1/86 (1%)

Query: 44  VPWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLY- 102
           VPWVE YR  ++ ++  + D V  +  +  ++ +P+L+L+GPPGTGKT++I+A+A +L  
Sbjct: 12  VPWVENYRSSNVINIVDNEDTVSRLQVIARDDNMPNLILFGPPGTGKTTSIIALAHELLR 71

Query: 103 GAQYHNMILELNASDDRGIGVVRQQI 128
           G  Y   +LELNAS+DRGI VVR +I
Sbjct: 72  GPNYKEAVLELNASNDRGIDVVRNKI 97


>Glyma15g38330.1 
          Length = 126

 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 1/76 (1%)

Query: 44  VPWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYG 103
           VPWVEKY P  +AD   + D V  +  +   N + +L+L GPP T KT++ILA+  KL G
Sbjct: 15  VPWVEKYHPIKVADAVVNEDAVSRLQVIARNNNMHNLILSGPPRTIKTTSILALMHKLLG 74

Query: 104 A-QYHNMILELNASDD 118
                  ILELNASD+
Sbjct: 75  GPNCKEAILELNASDE 90