Jatropha Genome Database

JcCB0285631.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0285631.10 - phase: 0 
         (82 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g19450.1                                                        57   6e-09
Glyma13g19450.2                                                        55   1e-08

>Glyma13g19450.1 
          Length = 464

 Score = 56.6 bits (135), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 5/63 (7%)

Query: 1  MYCCVPHYVSMKFPELSTSKIFSSFSLTKRDFKVFAVASSMDETANYIPAAPIFIPEGPW 60
          MY C+P ++ +    L++S    +F+   R+ ++ AV++      N+IPAAPIF+PEGPW
Sbjct: 1  MYSCIPQHLFLHL-HLASSPNPKAFNSPLRNLRIRAVSTK----ENHIPAAPIFLPEGPW 55

Query: 61 NQV 63
          NQ+
Sbjct: 56 NQI 58


>Glyma13g19450.2 
          Length = 371

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 5/63 (7%)

Query: 1  MYCCVPHYVSMKFPELSTSKIFSSFSLTKRDFKVFAVASSMDETANYIPAAPIFIPEGPW 60
          MY C+P ++ +    L++S    +F+   R+ ++ AV++      N+IPAAPIF+PEGPW
Sbjct: 1  MYSCIPQHLFLHL-HLASSPNPKAFNSPLRNLRIRAVSTK----ENHIPAAPIFLPEGPW 55

Query: 61 NQV 63
          NQ+
Sbjct: 56 NQI 58