Jatropha Genome Database

JcCB0284961.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0284961.10 + phase: 0 /pseudo/partial
         (189 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g05480.1                                                       245   2e-65
Glyma19g27340.1                                                       238   2e-63
Glyma08g47240.1                                                       100   9e-22
Glyma18g38490.1                                                       100   1e-21
Glyma20g04730.1                                                        80   1e-15
Glyma20g04750.1                                                        68   5e-12
Glyma18g05840.1                                                        66   2e-11
Glyma03g04330.1                                                        65   4e-11
Glyma01g32810.1                                                        65   4e-11
Glyma15g07350.1                                                        62   4e-10
Glyma13g31970.1                                                        62   4e-10
Glyma02g40280.1                                                        56   2e-08
Glyma09g15540.1                                                        55   5e-08
Glyma11g31270.1                                                        51   9e-07
Glyma20g04770.1                                                        50   1e-06

>Glyma16g05480.1 
          Length = 375

 Score =  245 bits (626), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 119/174 (68%), Positives = 139/174 (79%), Gaps = 12/174 (6%)

Query: 25  IVLQKAAEAHLPVLESKEGIFISMDDLDGLHVWSFKYRYWPNNNSRMYVLENTGDFVNTH 84
           I+ +KAAEA LP LESKEGI ISMDD+DGLHVWSFKYR+WPNNNSRMYVLENTGDFVNTH
Sbjct: 203 ILPKKAAEAFLPALESKEGIVISMDDIDGLHVWSFKYRFWPNNNSRMYVLENTGDFVNTH 262

Query: 85  GLQLGDFIM----------VIQARKASDEDVYANIAMTAVNDIFLHDYEVNKSSSFYMNY 134
           GL+ GD I+          VIQA+KASD+D +       +NDIFL+DYEVNK   F + Y
Sbjct: 263 GLRFGDSILVYQDSENNNYVIQAKKASDQDEFMEETSDTINDIFLNDYEVNKPGCFNVTY 322

Query: 135 PMVDNTGLSFIYDTTTIISNDSPLDFLGGSLTNYSRIGQMENFGSVENLSLDEF 188
           P V++TG+SFIY+TT   SNDSPLDFLGGS+TN+SRIG +E FGSVENLSLD+F
Sbjct: 323 PAVNDTGMSFIYETT--FSNDSPLDFLGGSMTNFSRIGPVETFGSVENLSLDDF 374


>Glyma19g27340.1 
          Length = 174

 Score =  238 bits (608), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 119/174 (68%), Positives = 138/174 (79%), Gaps = 12/174 (6%)

Query: 25  IVLQKAAEAHLPVLESKEGIFISMDDLDGLHVWSFKYRYWPNNNSRMYVLENTGDFVNTH 84
           I+ +KAAEA LP LESKEGI ISMDD+DGLHVWSFKYR+WPNNNSRMYVLENTGDFVNTH
Sbjct: 2   ILPKKAAEAFLPALESKEGIVISMDDIDGLHVWSFKYRFWPNNNSRMYVLENTGDFVNTH 61

Query: 85  GLQLGDFIM----------VIQARKASDEDVYANIAMTAVNDIFLHDYEVNKSSSFYMNY 134
           GL+ GD IM          VIQA+KASD+D +       +NDIFL+DYEVNK   F +  
Sbjct: 62  GLRFGDSIMVYQDSENNNYVIQAKKASDQDEFMEETSDTINDIFLNDYEVNKPGCFNVTN 121

Query: 135 PMVDNTGLSFIYDTTTIISNDSPLDFLGGSLTNYSRIGQMENFGSVENLSLDEF 188
           P V++TG+SFIY+TT   SNDSPLDFLGGS+TN+SRIG +E FGSVENLSLD+F
Sbjct: 122 PAVNDTGMSFIYETT--FSNDSPLDFLGGSMTNFSRIGPVETFGSVENLSLDDF 173


>Glyma08g47240.1 
          Length = 717

 Score =  100 bits (249), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 44/71 (61%), Positives = 57/71 (80%), Gaps = 1/71 (1%)

Query: 25  IVL-QKAAEAHLPVLESKEGIFISMDDLDGLHVWSFKYRYWPNNNSRMYVLENTGDFVNT 83
           IVL +K AE HLP LE+++GI I+M+D+    VW+ +YRYWPNN SRMY+LENTGDFV  
Sbjct: 578 IVLPKKEAETHLPELEARDGISITMEDIGTSRVWNMRYRYWPNNKSRMYLLENTGDFVRA 637

Query: 84  HGLQLGDFIMV 94
           +GLQ GDFI++
Sbjct: 638 NGLQEGDFIVI 648


>Glyma18g38490.1 
          Length = 662

 Score =  100 bits (248), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/71 (61%), Positives = 57/71 (80%), Gaps = 1/71 (1%)

Query: 25  IVL-QKAAEAHLPVLESKEGIFISMDDLDGLHVWSFKYRYWPNNNSRMYVLENTGDFVNT 83
           IVL +K AE HLP LE+++GI I+M+D+    VW+ +YRYWPNN SRMY+LENTGDFV  
Sbjct: 535 IVLPKKEAETHLPELEARDGISITMEDIGTSRVWNMRYRYWPNNKSRMYLLENTGDFVRA 594

Query: 84  HGLQLGDFIMV 94
           +GLQ GDFI++
Sbjct: 595 NGLQEGDFIVI 605


>Glyma20g04730.1 
          Length = 234

 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 48/70 (68%)

Query: 25 IVLQKAAEAHLPVLESKEGIFISMDDLDGLHVWSFKYRYWPNNNSRMYVLENTGDFVNTH 84
          ++ ++ AE  LP L  KEGI I + D+     WS KY+YW NN SRMY+L+NTGDFVN +
Sbjct: 22 VLPKREAEDKLPTLWKKEGINIVLKDVYSEIEWSIKYKYWTNNKSRMYILDNTGDFVNHY 81

Query: 85 GLQLGDFIMV 94
           LQ GDFI +
Sbjct: 82 KLQTGDFITL 91


>Glyma20g04750.1 
          Length = 123

 Score = 68.2 bits (165), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 4/74 (5%)

Query: 25 IVLQKAAEAHLPVLESKEGIFISMDDLDGLHVWSFKYRYWPNNNSRMYVLENT----GDF 80
          ++ ++ A+  LP L  +EGI I + D+     WS KY+YW NN SRMY+L+NT     DF
Sbjct: 22 VLPKREAKDKLPTLWKQEGINIVLKDVYSEIEWSIKYKYWTNNKSRMYILDNTVLQLQDF 81

Query: 81 VNTHGLQLGDFIMV 94
          VN + LQ GDFI +
Sbjct: 82 VNHYKLQTGDFITL 95


>Glyma18g05840.1 
          Length = 897

 Score = 66.2 bits (160), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 12/93 (12%)

Query: 21  RLM*IVLQKA-AEAHLPVLESKEGIFISMDDLDGLHVWSFKYRYWPNNNSRMYVLENTGD 79
           R+  +VL KA AEA+ P +   EG+ + M D+ G + W+F++R+WPNNNSRMYVLE    
Sbjct: 349 RIGRLVLPKACAEAYFPPISQSEGVPLRMQDVKG-NEWTFQFRFWPNNNSRMYVLEGVTP 407

Query: 80  FVNTHGLQLGDFI----------MVIQARKASD 102
            +    L  GD +          +V+  RKAS+
Sbjct: 408 CIQAMQLCAGDTVTFSRIDPGGKLVMGFRKASN 440


>Glyma03g04330.1 
          Length = 874

 Score = 65.1 bits (157), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 2/73 (2%)

Query: 21  RLM*IVLQKA-AEAHLPVLESKEGIFISMDDLDGLHVWSFKYRYWPNNNSRMYVLENTGD 79
           R+  +VL KA AEA+ P +   EG+ + + D+ G   W F++R+WPNNNSRMYVLE    
Sbjct: 270 RIGRLVLPKACAEAYFPPISQPEGLPLRIQDVKGKE-WMFQFRFWPNNNSRMYVLEGVTP 328

Query: 80  FVNTHGLQLGDFI 92
            + +  LQ GD +
Sbjct: 329 CIQSMQLQAGDTV 341


>Glyma01g32810.1 
          Length = 783

 Score = 65.1 bits (157), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 2/73 (2%)

Query: 21  RLM*IVLQKA-AEAHLPVLESKEGIFISMDDLDGLHVWSFKYRYWPNNNSRMYVLENTGD 79
           R+  +VL KA AEA+ P +   EG+ + + D+ G   W F++R+WPNNNSRMYVLE    
Sbjct: 244 RIGRLVLPKACAEAYFPPISQPEGLPLRIQDVKGKE-WMFQFRFWPNNNSRMYVLEGVTP 302

Query: 80  FVNTHGLQLGDFI 92
            + +  LQ GD +
Sbjct: 303 CIQSMQLQAGDTV 315


>Glyma15g07350.1 
          Length = 832

 Score = 61.6 bits (148), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 11/87 (12%)

Query: 25  IVLQKAAEAHLPVLESKEGIFISMDDLDGLHVWSFKYRYWPNNNSRMYVLENTGDFVNTH 84
           ++ +K AE + P +   EG+ + + D  G   W F++R+WPNNNSRMYVLE     + + 
Sbjct: 314 VLPKKCAETYFPPISQPEGLPLKILDAKGKE-WIFQFRFWPNNNSRMYVLEGVTPCIQSM 372

Query: 85  GLQLGDFI----------MVIQARKAS 101
            LQ GD +          +V+  RKAS
Sbjct: 373 QLQAGDTVTFSRLEPEGRLVMGFRKAS 399


>Glyma13g31970.1 
          Length = 840

 Score = 61.6 bits (148), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 11/87 (12%)

Query: 25  IVLQKAAEAHLPVLESKEGIFISMDDLDGLHVWSFKYRYWPNNNSRMYVLENTGDFVNTH 84
           ++ +K AE + P +   EG+ + + D  G   W F++R+WPNNNSRMYVLE     + + 
Sbjct: 352 VLPKKCAETYFPPISQPEGLPLKILDAKGKE-WIFQFRFWPNNNSRMYVLEGVTPCIQSM 410

Query: 85  GLQLGDFI----------MVIQARKAS 101
            LQ GD +          +V+  RKAS
Sbjct: 411 QLQAGDTVTFSRLEPEGRLVMGFRKAS 437


>Glyma02g40280.1 
          Length = 588

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 11/71 (15%)

Query: 42  EGIFISMDDLDGLHVWSFKYRYWPNNNSRMYVLENTGDFVNTHGLQLGDFIM-------- 93
           EG+ +   D+ G + W+F++R+WPNNNSRMYVLE     +    L  GD +M        
Sbjct: 267 EGLPLQFKDVKG-NDWTFQFRFWPNNNSRMYVLEGVTPCMQAMQLNAGDTVMFSRIDPGG 325

Query: 94  --VIQARKASD 102
             V+ +R+ASD
Sbjct: 326 KFVMGSRRASD 336


>Glyma09g15540.1 
          Length = 121

 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 5/61 (8%)

Query: 48  MDDLDGLHVWSFKYRYWPNNNSRMYVLENTGDFVNTHGLQLGDFIMVIQARKASDEDVYA 107
           MD       W F++R+WPNNNS+MYVLE     + +  LQ GD      ARKA  + ++ 
Sbjct: 31  MDASPKGKEWIFQFRFWPNNNSKMYVLEGVTPCIQSMQLQAGDI-----ARKARAKPIFT 85

Query: 108 N 108
           N
Sbjct: 86  N 86


>Glyma11g31270.1 
          Length = 537

 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 11/76 (14%)

Query: 48  MDDLDGLHVWSFKYRYWPNNNSRMYVLENTGDFVNTHGLQLGDFI----------MVIQA 97
           M D+ G + W+F++R+WPNNNSRMYVLE     +    L  GD +          +V+  
Sbjct: 1   MQDVKG-NEWTFQFRFWPNNNSRMYVLEGVTPCIQAMQLCAGDTVTFSRIDPGGKLVMGF 59

Query: 98  RKASDEDVYANIAMTA 113
           RKAS+     + + +A
Sbjct: 60  RKASNSTDTQDASTSA 75


>Glyma20g04770.1 
          Length = 55

 Score = 50.1 bits (118), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 5/54 (9%)

Query: 29 KAAEAHLPVLESKEGIFISMDDLDGLHVWSFKYR-----YWPNNNSRMYVLENT 77
          + AE  LP L  KEGI I + D+     WS KY+     YW NN SRMY+L+NT
Sbjct: 1  REAEDRLPTLWKKEGINIVLKDVYSEIEWSIKYKQRKSMYWTNNKSRMYILDNT 54