Jatropha Genome Database

JcCB0284841.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0284841.10 + phase: 0 /partial
         (88 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g07220.1                                                       127   3e-30
Glyma13g32100.1                                                       127   3e-30
Glyma07g30850.1                                                       124   3e-29
Glyma08g06450.1                                                       123   4e-29
Glyma06g42330.1                                                       122   1e-28
Glyma12g16090.1                                                       120   4e-28

>Glyma15g07220.1 
          Length = 625

 Score =  127 bits (319), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 59/91 (64%), Positives = 73/91 (80%), Gaps = 3/91 (3%)

Query: 1   EVENCYNSWRSP--NEVNPAECIQQLLEHVRRHKVNIDGDICIVMVTTLVLEGWQQKLDP 58
           EVE  +  W +P  + V+PAEC++QLLE VRRH+VNIDG++C VMVTTLVLEGWQ+KLDP
Sbjct: 535 EVEESFTFWGTPEGDIVHPAECMEQLLEKVRRHRVNIDGNVCTVMVTTLVLEGWQRKLDP 594

Query: 59  EYNV-SALQSLLFKVDYADSLCYTIEGLMAP 88
            YNV   LQ+LL + D+A SL YTI+GLMAP
Sbjct: 595 GYNVMQTLQTLLLRADWAKSLSYTIDGLMAP 625


>Glyma13g32100.1 
          Length = 625

 Score =  127 bits (318), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 59/91 (64%), Positives = 73/91 (80%), Gaps = 3/91 (3%)

Query: 1   EVENCYNSWRSP--NEVNPAECIQQLLEHVRRHKVNIDGDICIVMVTTLVLEGWQQKLDP 58
           EVE  +  W +P  + V+PAEC++QLLE VRRH+VNIDG++C VMVTTLVLEGWQ+KLDP
Sbjct: 535 EVEESFTFWGTPEGDIVHPAECMEQLLEKVRRHRVNIDGNVCTVMVTTLVLEGWQRKLDP 594

Query: 59  EYNV-SALQSLLFKVDYADSLCYTIEGLMAP 88
            YNV   LQ+LL + D+A SL YTI+GLMAP
Sbjct: 595 GYNVMQTLQTLLLRADWAKSLSYTIDGLMAP 625


>Glyma07g30850.1 
          Length = 622

 Score =  124 bits (310), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 56/91 (61%), Positives = 74/91 (81%), Gaps = 3/91 (3%)

Query: 1   EVENCYNSWRSP--NEVNPAECIQQLLEHVRRHKVNIDGDICIVMVTTLVLEGWQQKLDP 58
           E+E  +  W +P  + V+PAEC++QLLE VRRHKVN+DG++C V+VTTLVLEGWQ+KLDP
Sbjct: 532 EMEEAFTFWGTPEGDLVHPAECMEQLLEKVRRHKVNVDGNVCTVLVTTLVLEGWQRKLDP 591

Query: 59  EYNV-SALQSLLFKVDYADSLCYTIEGLMAP 88
            Y+V + LQ+LL + D+A SL YTI+GLMAP
Sbjct: 592 GYDVMNTLQTLLLRADWAKSLSYTIDGLMAP 622


>Glyma08g06450.1 
          Length = 622

 Score =  123 bits (309), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 56/91 (61%), Positives = 74/91 (81%), Gaps = 3/91 (3%)

Query: 1   EVENCYNSWRSP--NEVNPAECIQQLLEHVRRHKVNIDGDICIVMVTTLVLEGWQQKLDP 58
           E+E  +  W +P  + V+PAEC++QLLE VRRHKVN+DG++C V+VTTLVLEGWQ+KLDP
Sbjct: 532 EMEESFTFWGTPEGDLVHPAECMEQLLEKVRRHKVNVDGNVCTVLVTTLVLEGWQRKLDP 591

Query: 59  EYNV-SALQSLLFKVDYADSLCYTIEGLMAP 88
            Y+V + LQ+LL + D+A SL YTI+GLMAP
Sbjct: 592 GYDVMNTLQTLLLRADWAKSLSYTIDGLMAP 622


>Glyma06g42330.1 
          Length = 616

 Score =  122 bits (305), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 59/91 (64%), Positives = 73/91 (80%), Gaps = 3/91 (3%)

Query: 1   EVENCYNSWRSPN--EVNPAECIQQLLEHVRRHKVNIDGDICIVMVTTLVLEGWQQKLDP 58
           EV+  +  WRSP    V+ A+ +QQLLEHVRR KVNIDG++C V+VTTLVLEGWQ++LDP
Sbjct: 526 EVDKSFELWRSPEGESVHTADRMQQLLEHVRRCKVNIDGNVCAVIVTTLVLEGWQRRLDP 585

Query: 59  EYNV-SALQSLLFKVDYADSLCYTIEGLMAP 88
           EY+V  ALQ+LLFK D A+SL Y IEGL+AP
Sbjct: 586 EYDVLHALQALLFKADLAESLSYAIEGLVAP 616


>Glyma12g16090.1 
          Length = 619

 Score =  120 bits (300), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 58/91 (63%), Positives = 72/91 (79%), Gaps = 3/91 (3%)

Query: 1   EVENCYNSWRSPN--EVNPAECIQQLLEHVRRHKVNIDGDICIVMVTTLVLEGWQQKLDP 58
           EV+  +  WRSP    V+ A+ +QQLLEHVRR KVNIDG++C V+VTTLVLEGWQ++LDP
Sbjct: 529 EVDKSFEFWRSPEGESVHTADRMQQLLEHVRRCKVNIDGNVCAVIVTTLVLEGWQRRLDP 588

Query: 59  EYN-VSALQSLLFKVDYADSLCYTIEGLMAP 88
           EY+ + ALQ+LLFK D A SL Y IEGL+AP
Sbjct: 589 EYDMLHALQTLLFKADLAQSLSYAIEGLVAP 619