Jatropha Genome Database

JcCB0284451.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0284451.30 - phase: 1 /partial
         (113 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g15140.1                                                       220   3e-58
Glyma19g29180.2                                                       219   7e-58
Glyma19g29180.1                                                       219   7e-58
Glyma16g04240.3                                                       218   8e-58
Glyma16g04240.1                                                       218   8e-58
Glyma04g30350.1                                                       212   7e-56
Glyma05g10840.1                                                       210   3e-55
Glyma17g24400.1                                                       209   6e-55
Glyma17g23730.1                                                       205   1e-53
Glyma04g18200.1                                                       175   8e-45
Glyma17g23610.1                                                       158   1e-39
Glyma09g14600.1                                                       144   1e-35

>Glyma13g15140.1 
          Length = 803

 Score =  220 bits (561), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 104/113 (92%), Positives = 109/113 (96%)

Query: 1   FNDIIHSIINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIA 60
           FNDIIHSII+MDADVITIENSRSDEKLLSVFREGVKYGAGIGPG+YDIHSPRIP TEEIA
Sbjct: 691 FNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGIYDIHSPRIPPTEEIA 750

Query: 61  DRINKMLAVLEKNILWVNPDCGLKTRKYSEVKPALKNMVAAAKLLRTELASAK 113
           DRINKMLAVLE NILWVNPDCGLKTRKY+EVKPAL NMVAAAKL+R +LASAK
Sbjct: 751 DRINKMLAVLESNILWVNPDCGLKTRKYTEVKPALTNMVAAAKLIRNQLASAK 803


>Glyma19g29180.2 
          Length = 763

 Score =  219 bits (557), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 104/110 (94%), Positives = 107/110 (97%)

Query: 1   FNDIIHSIINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIA 60
           FNDIIHSII+MDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIP TEEIA
Sbjct: 653 FNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIA 712

Query: 61  DRINKMLAVLEKNILWVNPDCGLKTRKYSEVKPALKNMVAAAKLLRTELA 110
           DRINKMLAVLEKNILWVNPDCGLKTRKY+EVKPAL NMVAAAKL+R ELA
Sbjct: 713 DRINKMLAVLEKNILWVNPDCGLKTRKYTEVKPALTNMVAAAKLIRNELA 762


>Glyma19g29180.1 
          Length = 763

 Score =  219 bits (557), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 104/110 (94%), Positives = 107/110 (97%)

Query: 1   FNDIIHSIINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIA 60
           FNDIIHSII+MDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIP TEEIA
Sbjct: 653 FNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIA 712

Query: 61  DRINKMLAVLEKNILWVNPDCGLKTRKYSEVKPALKNMVAAAKLLRTELA 110
           DRINKMLAVLEKNILWVNPDCGLKTRKY+EVKPAL NMVAAAKL+R ELA
Sbjct: 713 DRINKMLAVLEKNILWVNPDCGLKTRKYTEVKPALTNMVAAAKLIRNELA 762


>Glyma16g04240.3 
          Length = 763

 Score =  218 bits (556), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 104/110 (94%), Positives = 107/110 (97%)

Query: 1   FNDIIHSIINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIA 60
           FNDIIHSII+MDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIP TEEIA
Sbjct: 653 FNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIA 712

Query: 61  DRINKMLAVLEKNILWVNPDCGLKTRKYSEVKPALKNMVAAAKLLRTELA 110
           DRINKMLAVLEKNILWVNPDCGLKTRKY+EVKPAL NMVAAAKL+R ELA
Sbjct: 713 DRINKMLAVLEKNILWVNPDCGLKTRKYTEVKPALTNMVAAAKLIRNELA 762


>Glyma16g04240.1 
          Length = 763

 Score =  218 bits (556), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 104/110 (94%), Positives = 107/110 (97%)

Query: 1   FNDIIHSIINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIA 60
           FNDIIHSII+MDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIP TEEIA
Sbjct: 653 FNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIA 712

Query: 61  DRINKMLAVLEKNILWVNPDCGLKTRKYSEVKPALKNMVAAAKLLRTELA 110
           DRINKMLAVLEKNILWVNPDCGLKTRKY+EVKPAL NMVAAAKL+R ELA
Sbjct: 713 DRINKMLAVLEKNILWVNPDCGLKTRKYTEVKPALTNMVAAAKLIRNELA 762


>Glyma04g30350.1 
          Length = 799

 Score =  212 bits (540), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 100/109 (91%), Positives = 105/109 (96%)

Query: 1   FNDIIHSIINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIA 60
           FNDIIHSII+MDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIP TEEIA
Sbjct: 691 FNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIA 750

Query: 61  DRINKMLAVLEKNILWVNPDCGLKTRKYSEVKPALKNMVAAAKLLRTEL 109
           DRINKMLAVLE +ILWVNPDCGLKTRKY+EVKPAL NMVAAAKL+R +L
Sbjct: 751 DRINKMLAVLESSILWVNPDCGLKTRKYTEVKPALTNMVAAAKLIRNQL 799


>Glyma05g10840.1 
          Length = 763

 Score =  210 bits (534), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 99/110 (90%), Positives = 104/110 (94%)

Query: 1   FNDIIHSIINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIA 60
           FNDIIHSII+MDADVITIENSRSDEKLLSVFR+GVKYGAGIGPGVYDIHSPRIP T+EIA
Sbjct: 653 FNDIIHSIIDMDADVITIENSRSDEKLLSVFRDGVKYGAGIGPGVYDIHSPRIPPTDEIA 712

Query: 61  DRINKMLAVLEKNILWVNPDCGLKTRKYSEVKPALKNMVAAAKLLRTELA 110
           DRINKMLAVLEKNILWVNPDCGLKTRKY EV PAL NMVAA KL+R +LA
Sbjct: 713 DRINKMLAVLEKNILWVNPDCGLKTRKYPEVNPALTNMVAATKLIRNQLA 762


>Glyma17g24400.1 
          Length = 765

 Score =  209 bits (532), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 99/110 (90%), Positives = 104/110 (94%)

Query: 1   FNDIIHSIINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIA 60
           FNDIIHSII+MDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIP T+EIA
Sbjct: 655 FNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTDEIA 714

Query: 61  DRINKMLAVLEKNILWVNPDCGLKTRKYSEVKPALKNMVAAAKLLRTELA 110
           DRINKMLAVLEKNILWVNPDCGLKTRKY EV PAL NMVAA KL+R +L+
Sbjct: 715 DRINKMLAVLEKNILWVNPDCGLKTRKYPEVNPALTNMVAATKLIRNKLS 764


>Glyma17g23730.1 
          Length = 758

 Score =  205 bits (521), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 97/105 (92%), Positives = 100/105 (95%)

Query: 1   FNDIIHSIINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIA 60
           FNDIIHSII+MDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIP T+EIA
Sbjct: 653 FNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTDEIA 712

Query: 61  DRINKMLAVLEKNILWVNPDCGLKTRKYSEVKPALKNMVAAAKLL 105
           DRINKMLAVLEKNILWVNPDCGLKTRKY EV PAL NMVAA KL+
Sbjct: 713 DRINKMLAVLEKNILWVNPDCGLKTRKYPEVNPALTNMVAATKLI 757


>Glyma04g18200.1 
          Length = 181

 Score =  175 bits (444), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 87/113 (76%), Positives = 91/113 (80%), Gaps = 4/113 (3%)

Query: 1   FNDIIHSIINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIA 60
           FNDIIHSIINMD DVITIENSRSDE LL V  EGVKY AGI    YDIHSPRIP TEEI 
Sbjct: 73  FNDIIHSIINMDVDVITIENSRSDENLLLVICEGVKYRAGI----YDIHSPRIPPTEEIV 128

Query: 61  DRINKMLAVLEKNILWVNPDCGLKTRKYSEVKPALKNMVAAAKLLRTELASAK 113
           DRINKML VLE NILWVNPDCGL TRKY++VKPAL NMV   KL+  +LAS K
Sbjct: 129 DRINKMLVVLESNILWVNPDCGLMTRKYTKVKPALTNMVVVIKLICNQLASTK 181


>Glyma17g23610.1 
          Length = 95

 Score =  158 bits (400), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 77/95 (81%), Positives = 83/95 (87%)

Query: 16  ITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLEKNIL 75
           ITI+NSRSDEKLL VF EGVKYGAGIGPGVYDIH PRIP T E A++INKMLAVLEKNIL
Sbjct: 1   ITIKNSRSDEKLLPVFHEGVKYGAGIGPGVYDIHFPRIPPTIETANKINKMLAVLEKNIL 60

Query: 76  WVNPDCGLKTRKYSEVKPALKNMVAAAKLLRTELA 110
           WV  DCGLKTRKY++VK AL NMV AAKL+R ELA
Sbjct: 61  WVKTDCGLKTRKYTKVKSALTNMVVAAKLIRNELA 95


>Glyma09g14600.1 
          Length = 85

 Score =  144 bits (364), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 68/85 (80%), Positives = 75/85 (88%)

Query: 16  ITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLEKNIL 75
           +TIENSRSDEKLLSVF EGVKYG GIGPG+YDIHSPRIP TEEIA +INKMLA+L+ NIL
Sbjct: 1   VTIENSRSDEKLLSVFHEGVKYGVGIGPGIYDIHSPRIPLTEEIAYKINKMLAMLKNNIL 60

Query: 76  WVNPDCGLKTRKYSEVKPALKNMVA 100
           WVNPDCGL T K++EVK AL NMV 
Sbjct: 61  WVNPDCGLMTCKHTEVKLALTNMVV 85