Jatropha Genome Database

JcCB0284451.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0284451.20 - phase: 0 /partial
         (80 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g10870.1                                                       107   3e-24
Glyma19g42970.1                                                        70   5e-13
Glyma13g40070.1                                                        66   7e-12
Glyma11g20530.1                                                        66   8e-12
Glyma12g08070.1                                                        66   9e-12
Glyma12g29420.1                                                        65   1e-11
Glyma08g42580.1                                                        65   1e-11
Glyma06g34600.1                                                        64   4e-11
Glyma14g07600.1                                                        60   7e-10
Glyma09g25990.1                                                        55   1e-08
Glyma06g10200.2                                                        55   2e-08
Glyma06g10200.1                                                        55   2e-08
Glyma04g10230.1                                                        54   3e-08
Glyma18g50130.1                                                        54   4e-08

>Glyma05g10870.1 
          Length = 140

 Score =  107 bits (267), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 57/69 (82%)

Query: 1  MYKTKLQELCHQKIWNLPSYDTTKEGPDHDPRFRVTVTVNGLSFHSQSPFRSSKHAQNDA 60
          MYKT+LQELC ++ W LP+YD ++EGPDH+PRF  TV VNG+SFH+ SP RS+K AQNDA
Sbjct: 1  MYKTRLQELCQRRSWTLPTYDNSREGPDHNPRFTSTVNVNGVSFHTPSPTRSAKQAQNDA 60

Query: 61 AKVAFDHFS 69
          A +AF HFS
Sbjct: 61 AMLAFLHFS 69


>Glyma19g42970.1 
          Length = 527

 Score = 70.1 bits (170), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 46/72 (63%)

Query: 1  MYKTKLQELCHQKIWNLPSYDTTKEGPDHDPRFRVTVTVNGLSFHSQSPFRSSKHAQNDA 60
          MYK +LQEL  +  +NLP+Y   +EGPDH PRF+ TV  NG +F S +   + + A++ A
Sbjct: 1  MYKNRLQELAQRSCFNLPAYSCIREGPDHAPRFKATVNFNGETFESPTFCSTLRQAEHAA 60

Query: 61 AKVAFDHFSTGG 72
          A+VA +  +  G
Sbjct: 61 AEVALNTIAKRG 72



 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 1/68 (1%)

Query: 1   MYKTKLQELCHQKIWNLPSYDTTKEGPDHDPRFRVTVTVNGLSFHSQSPFRSSKHAQNDA 60
           +YK  LQE  H+   NLP Y T + GP H P F  +V + G+ F +  P R+ K AQ +A
Sbjct: 87  VYKNLLQETAHRAGLNLPVYTTIRSGPGHGPNFSCSVEIAGMHF-TGDPSRTKKQAQKNA 145

Query: 61  AKVAFDHF 68
           A  A+   
Sbjct: 146 AMAAWSAL 153


>Glyma13g40070.1 
          Length = 479

 Score = 66.2 bits (160), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 43/72 (59%)

Query: 1  MYKTKLQELCHQKIWNLPSYDTTKEGPDHDPRFRVTVTVNGLSFHSQSPFRSSKHAQNDA 60
          MYK +LQEL  +  +NLPSY   +EGPDH PRF+ TV  NG  F +     + + A++ A
Sbjct: 1  MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFETPHYCSTLRQAEHSA 60

Query: 61 AKVAFDHFSTGG 72
          A+ A +  S  G
Sbjct: 61 AEAALNSLSHRG 72


>Glyma11g20530.1 
          Length = 411

 Score = 66.2 bits (160), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 32/69 (46%), Positives = 43/69 (62%)

Query: 1  MYKTKLQELCHQKIWNLPSYDTTKEGPDHDPRFRVTVTVNGLSFHSQSPFRSSKHAQNDA 60
          MYK +LQEL  +  +NLPSY   +EGPDH PRF+ TV  NG  F S     + + A++ A
Sbjct: 1  MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 60

Query: 61 AKVAFDHFS 69
          A+VA +  S
Sbjct: 61 AEVALNSLS 69


>Glyma12g08070.1 
          Length = 401

 Score = 65.9 bits (159), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 32/69 (46%), Positives = 43/69 (62%)

Query: 1  MYKTKLQELCHQKIWNLPSYDTTKEGPDHDPRFRVTVTVNGLSFHSQSPFRSSKHAQNDA 60
          MYK +LQEL  +  +NLPSY   +EGPDH PRF+ TV  NG  F S     + + A++ A
Sbjct: 1  MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 60

Query: 61 AKVAFDHFS 69
          A+VA +  S
Sbjct: 61 AEVALNSLS 69


>Glyma12g29420.1 
          Length = 411

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/72 (45%), Positives = 44/72 (61%)

Query: 1  MYKTKLQELCHQKIWNLPSYDTTKEGPDHDPRFRVTVTVNGLSFHSQSPFRSSKHAQNDA 60
          MYK +LQEL  +  +NLPSY   +EGPDH PRF+ TV  NG  F S     + + A++ A
Sbjct: 1  MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 60

Query: 61 AKVAFDHFSTGG 72
          A+VA +  S  G
Sbjct: 61 AEVALNSLSHRG 72


>Glyma08g42580.1 
          Length = 319

 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 33/46 (71%)

Query: 1  MYKTKLQELCHQKIWNLPSYDTTKEGPDHDPRFRVTVTVNGLSFHS 46
          MYK KLQELCHQ+ W LP Y   K+GPDH P F+ +V VN ++F S
Sbjct: 1  MYKAKLQELCHQRKWGLPRYSAMKDGPDHMPSFKASVYVNRVTFTS 46



 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 1/71 (1%)

Query: 2   YKTKLQELCHQKIWNLPSYDTTKEGPDHDPRFRVTVTVNGLSFHSQSPFRSSKHAQNDAA 61
           +KT L  L  ++ ++ P+Y T + G  H P F  TV V G+ FH +   RS K A+ DAA
Sbjct: 150 FKTSLLRLSERQDFHKPTYKTMQAGSPHMPTFFSTVEVEGVEFHGKGG-RSKKQAEEDAA 208

Query: 62  KVAFDHFSTGG 72
           K+A+      G
Sbjct: 209 KIAYIALKECG 219


>Glyma06g34600.1 
          Length = 150

 Score = 63.9 bits (154), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 44/72 (61%)

Query: 1  MYKTKLQELCHQKIWNLPSYDTTKEGPDHDPRFRVTVTVNGLSFHSQSPFRSSKHAQNDA 60
          MYK +LQEL  +  +NLPSY + +EGP+H PRF+ T+  NG  F +     + + A++ A
Sbjct: 1  MYKNQLQELAQRSCFNLPSYMSIREGPNHAPRFKATIKFNGEIFETPHYCSTLRQAEHSA 60

Query: 61 AKVAFDHFSTGG 72
          A+V  +  S  G
Sbjct: 61 AEVPLNSLSHRG 72


>Glyma14g07600.1 
          Length = 459

 Score = 59.7 bits (143), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 40/68 (58%)

Query: 1  MYKTKLQELCHQKIWNLPSYDTTKEGPDHDPRFRVTVTVNGLSFHSQSPFRSSKHAQNDA 60
          MYK +LQE   +   N P Y T  EG DH P+FR TV V  + + SQS F   K A+++A
Sbjct: 26 MYKNRLQEFTSKSGINFPVYQTINEGQDHSPKFRSTVWVADMGYTSQSTFSHKKAAEHEA 85

Query: 61 AKVAFDHF 68
          A++A +  
Sbjct: 86 ARLALESI 93


>Glyma09g25990.1 
          Length = 68

 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 35/60 (58%)

Query: 6  LQELCHQKIWNLPSYDTTKEGPDHDPRFRVTVTVNGLSFHSQSPFRSSKHAQNDAAKVAF 65
          LQE CH++   LP Y T  EG  H+ RFR  V+V G  + SQ  F   K A+ +AA++A 
Sbjct: 2  LQEYCHKRGIQLPLYQTWSEGQQHETRFRSAVSVAGNIYTSQCVFSKKKLAEQEAARLAL 61


>Glyma06g10200.2 
          Length = 359

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 39/65 (60%)

Query: 1  MYKTKLQELCHQKIWNLPSYDTTKEGPDHDPRFRVTVTVNGLSFHSQSPFRSSKHAQNDA 60
          ++K++LQE   +     P Y+T KEGP H+P FR TV VN + + S   F + K A+  A
Sbjct: 15 VFKSRLQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVNDVRYDSLPGFFNRKAAEQSA 74

Query: 61 AKVAF 65
          A+VA 
Sbjct: 75 AEVAL 79


>Glyma06g10200.1 
          Length = 363

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 39/65 (60%)

Query: 1  MYKTKLQELCHQKIWNLPSYDTTKEGPDHDPRFRVTVTVNGLSFHSQSPFRSSKHAQNDA 60
          ++K++LQE   +     P Y+T KEGP H+P FR TV VN + + S   F + K A+  A
Sbjct: 15 VFKSRLQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVNDVRYDSLPGFFNRKAAEQSA 74

Query: 61 AKVAF 65
          A+VA 
Sbjct: 75 AEVAL 79


>Glyma04g10230.1 
          Length = 359

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 39/65 (60%)

Query: 1  MYKTKLQELCHQKIWNLPSYDTTKEGPDHDPRFRVTVTVNGLSFHSQSPFRSSKHAQNDA 60
          ++K++LQE   +     P Y+T KEGP H+P FR TV VN + + S   F + K A+  A
Sbjct: 15 VFKSRLQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVNDVRYDSLPGFFNRKAAEQSA 74

Query: 61 AKVAF 65
          A+VA 
Sbjct: 75 AEVAL 79


>Glyma18g50130.1 
          Length = 90

 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 39/67 (58%)

Query: 2  YKTKLQELCHQKIWNLPSYDTTKEGPDHDPRFRVTVTVNGLSFHSQSPFRSSKHAQNDAA 61
          YKT+LQ    +   +LP Y    EG  HDP+FR TV V+G+ + S + F   + A+ D A
Sbjct: 10 YKTRLQSFTQKCNISLPMYINVNEGRQHDPKFRSTVWVDGMKYTSPNTFSRLRAAEADVA 69

Query: 62 KVAFDHF 68
          ++A ++ 
Sbjct: 70 RMALENL 76