Jatropha Genome Database

JcCB0283991.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0283991.10 + phase: 0 /pseudo/partial
         (275 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g31200.1                                                       417   e-117
Glyma15g08150.1                                                       415   e-116
Glyma13g31200.2                                                       246   2e-65

>Glyma13g31200.1 
          Length = 557

 Score =  417 bits (1072), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 202/244 (82%), Positives = 209/244 (85%)

Query: 32  NFSQQVLIRDGNKVAFDEPNPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVQSVVEVN 91
           NFSQQVLIRDGNKV FDE NPFANEGEEVASVAYRYRRWKLDDDMYLVARCEV SVV+VN
Sbjct: 314 NFSQQVLIRDGNKVTFDEANPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVHSVVDVN 373

Query: 92  KQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLARWTAQALLASADL 151
           KQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLA+WTAQALLASAD 
Sbjct: 374 KQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADT 433

Query: 152 MKLGFVSRVHPRDHYNHVILAVLGYKPRDFAAQINLNTSNMWGIVKSIVDLCMKLNEGKY 211
           MKLG+VSR+HPRDH+NHVILAV+GYKPRDFAAQINLNT+NMWGIVKSIVDLCMKLNEGKY
Sbjct: 434 MKLGYVSRIHPRDHFNHVILAVVGYKPRDFAAQINLNTTNMWGIVKSIVDLCMKLNEGKY 493

Query: 212 VLVKDPSKPQVRIYEVPADAFENDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVEDKNI 271
           VLVKDPSKPQVRIYEVPADAFENDY                            DVEDK I
Sbjct: 494 VLVKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQVQPPSEGAEGGEATTTTNDVEDKQI 553

Query: 272 SAQA 275
             QA
Sbjct: 554 DGQA 557


>Glyma15g08150.1 
          Length = 565

 Score =  415 bits (1066), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 202/244 (82%), Positives = 209/244 (85%)

Query: 32  NFSQQVLIRDGNKVAFDEPNPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVQSVVEVN 91
           NFSQQVLIRDGNKV FDE NPFANEGEEVASVAYRYRRWKLDDDMYLVARCEV SVV+VN
Sbjct: 322 NFSQQVLIRDGNKVTFDEANPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVHSVVDVN 381

Query: 92  KQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLARWTAQALLASADL 151
           KQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLA+WTAQALLASAD 
Sbjct: 382 KQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADT 441

Query: 152 MKLGFVSRVHPRDHYNHVILAVLGYKPRDFAAQINLNTSNMWGIVKSIVDLCMKLNEGKY 211
           MKLG+VSR+HPRDH+NHVILAV+GYKPRDFAAQINLNT+NMWGIVKSIVDLCMKLNEGKY
Sbjct: 442 MKLGYVSRIHPRDHFNHVILAVVGYKPRDFAAQINLNTTNMWGIVKSIVDLCMKLNEGKY 501

Query: 212 VLVKDPSKPQVRIYEVPADAFENDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVEDKNI 271
           VLVKDPSKPQVRIYEVPADAFENDY                            DVEDK I
Sbjct: 502 VLVKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQVQPPAEGAEGGEAAATTNDVEDKQI 561

Query: 272 SAQA 275
             QA
Sbjct: 562 DGQA 565


>Glyma13g31200.2 
          Length = 439

 Score =  246 bits (628), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 118/126 (93%), Positives = 121/126 (96%)

Query: 32  NFSQQVLIRDGNKVAFDEPNPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVQSVVEVN 91
           NFSQQVLIRDGNKV FDE NPFANEGEEVASVAYRYRRWKLDDDMYLVARCEV SVV+VN
Sbjct: 314 NFSQQVLIRDGNKVTFDEANPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVHSVVDVN 373

Query: 92  KQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLARWTAQALLASADL 151
           KQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLA+WTAQALLASAD 
Sbjct: 374 KQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADT 433

Query: 152 MKLGFV 157
           MKLG +
Sbjct: 434 MKLGLI 439