Jatropha Genome Database

JcCB0281811.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0281811.20 + phase: 0 
         (118 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g42810.1                                                       181   2e-46
Glyma05g36240.1                                                       162   7e-41
Glyma08g03410.1                                                       162   1e-40
Glyma15g02630.1                                                       102   8e-23
Glyma03g07220.1                                                        97   4e-21

>Glyma13g42810.1 
          Length = 122

 Score =  181 bits (458), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 79/122 (64%), Positives = 104/122 (85%), Gaps = 4/122 (3%)

Query: 1   MASKLPQLQSKLHSAAK----HGCAFYKQLLEENKQYIQNPPTVERCQLLANQLLFTRLA 56
           MASK+PQLQSK++ A++    HG ++Y+ LL++NK YIQ+PPT+E+CQ LA QL +TRLA
Sbjct: 1   MASKIPQLQSKVNQASQAAKNHGASYYRLLLDQNKHYIQDPPTIEKCQSLAKQLFYTRLA 60

Query: 57  SIPNRYEAFWKELEGLKNLMKSKPEMNIEKAGLVALFGVECFAWFWGGEIIGRGFTFTGY 116
           SIP+RY +FWKEL+  KNL+K++ ++N+EK G  ALFG+ECFAWFWGGEI+GRGFTFTGY
Sbjct: 61  SIPHRYNSFWKELDHAKNLVKNRQDLNMEKVGFAALFGLECFAWFWGGEIVGRGFTFTGY 120

Query: 117 YV 118
           YV
Sbjct: 121 YV 122


>Glyma05g36240.1 
          Length = 122

 Score =  162 bits (410), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 77/122 (63%), Positives = 97/122 (79%), Gaps = 4/122 (3%)

Query: 1   MASKLPQLQSKLHSAAKHGCA----FYKQLLEENKQYIQNPPTVERCQLLANQLLFTRLA 56
           MASKL +LQ+    A++  C+    +YKQLLE+NKQ+IQ PPTVE+C LLA QL +TRLA
Sbjct: 1   MASKLQKLQATASQASQFVCSRGTNYYKQLLEQNKQHIQEPPTVEKCNLLAKQLFYTRLA 60

Query: 57  SIPNRYEAFWKELEGLKNLMKSKPEMNIEKAGLVALFGVECFAWFWGGEIIGRGFTFTGY 116
           SIP+R E+FWKEL+  KNL K++ E+ +E AG+ ALFG+ECFAWF  GEI+GRGFTFTGY
Sbjct: 61  SIPSRNESFWKELDYAKNLWKNRKELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 117 YV 118
           YV
Sbjct: 121 YV 122


>Glyma08g03410.1 
          Length = 122

 Score =  162 bits (409), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 77/122 (63%), Positives = 97/122 (79%), Gaps = 4/122 (3%)

Query: 1   MASKLPQLQSKLHSAAK----HGCAFYKQLLEENKQYIQNPPTVERCQLLANQLLFTRLA 56
           MASKL +LQS    A++     G  +Y+QLLE+NKQ+IQ PPTVE+C LLA QL +TRLA
Sbjct: 1   MASKLQKLQSAACQASQFVSSRGTNYYRQLLEQNKQHIQEPPTVEKCNLLAKQLFYTRLA 60

Query: 57  SIPNRYEAFWKELEGLKNLMKSKPEMNIEKAGLVALFGVECFAWFWGGEIIGRGFTFTGY 116
           SIP R E+FWKEL+ +KNL K++ E+ +E AG+ ALFG+ECFAW+ GGEI+GRGFTFTGY
Sbjct: 61  SIPGRNESFWKELDYVKNLWKNRKELKVEDAGIAALFGLECFAWYCGGEIVGRGFTFTGY 120

Query: 117 YV 118
           YV
Sbjct: 121 YV 122


>Glyma15g02630.1 
          Length = 131

 Score =  102 bits (254), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 55/64 (85%)

Query: 55  LASIPNRYEAFWKELEGLKNLMKSKPEMNIEKAGLVALFGVECFAWFWGGEIIGRGFTFT 114
           L +IP+RY +FWKEL+  KNL+K++ ++N+EK G  ALFG+ECFAWFWGGEI+GRG TFT
Sbjct: 68  LYTIPHRYNSFWKELDHAKNLVKNRQDLNMEKVGFAALFGLECFAWFWGGEIVGRGCTFT 127

Query: 115 GYYV 118
           GYYV
Sbjct: 128 GYYV 131


>Glyma03g07220.1 
          Length = 79

 Score = 97.1 bits (240), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 43/75 (57%), Positives = 57/75 (76%), Gaps = 1/75 (1%)

Query: 44  QLLANQLLFTRLASIPNRYEAFWKELEGLKNLMKSKPEMNIEKAGLVALFGVECFAWFWG 103
           +L++  LL     SIP+RY + WKEL+  KNL+K++ ++N+EK    ALFG+ECFAWFWG
Sbjct: 6   RLISLNLLLI-FCSIPHRYNSLWKELDHAKNLVKNRQDLNLEKVSFAALFGLECFAWFWG 64

Query: 104 GEIIGRGFTFTGYYV 118
           GEI+GRG TFT YYV
Sbjct: 65  GEIVGRGCTFTSYYV 79