Jatropha Genome Database

JcCB0280191.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0280191.10 + phase: 0 /pseudo/partial
         (160 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g40510.1                                                       164   3e-41
Glyma11g04800.1                                                       164   4e-41

>Glyma01g40510.1 
          Length = 457

 Score =  164 bits (416), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 94/162 (58%), Positives = 111/162 (68%), Gaps = 25/162 (15%)

Query: 1   CELAKKEMEYDDKRIRALQERLLNGIKAKLDGVVVNGSVERRYAGNLNVSFAYVEGESLL 60
           CE+AK EMEYD+KRI ALQ+RLLNGI+ KLDGVVVNGS+ERRY GNLN+SFAYVEGESLL
Sbjct: 308 CEVAKNEMEYDEKRISALQQRLLNGIREKLDGVVVNGSLERRYVGNLNLSFAYVEGESLL 367

Query: 61  MGLKDVAVSSGSACTSASLEPSYVLRALG----------**GYGAYFNKV---RHWEVYH 107
           MGLK+VAVSSGSACTSASLEPSYVLRALG            G G +  +    R  E+  
Sbjct: 368 MGLKEVAVSSGSACTSASLEPSYVLRALGVEEDMAHTSIRFGIGRFTTEAEIDRAVELTV 427

Query: 108 RRGD**GH*AYSEAGGKVKRNEPAL*DGEGGIDIKQIQWAQH 149
           ++ +            K++   P     + GI+IK IQWAQH
Sbjct: 428 QQVE------------KLREMSPLYEMVKEGINIKDIQWAQH 457


>Glyma11g04800.1 
          Length = 457

 Score =  164 bits (415), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 94/162 (58%), Positives = 111/162 (68%), Gaps = 25/162 (15%)

Query: 1   CELAKKEMEYDDKRIRALQERLLNGIKAKLDGVVVNGSVERRYAGNLNVSFAYVEGESLL 60
           CE+AK EMEYD+KRI ALQ+RLLNGI+ KLDGVVVNGS+ERRY GNLN+SFAYVEGESLL
Sbjct: 308 CEVAKDEMEYDEKRISALQQRLLNGIREKLDGVVVNGSLERRYVGNLNLSFAYVEGESLL 367

Query: 61  MGLKDVAVSSGSACTSASLEPSYVLRALG----------**GYGAYFNKV---RHWEVYH 107
           MGLK+VAVSSGSACTSASLEPSYVLRALG            G G +  +    R  E+  
Sbjct: 368 MGLKEVAVSSGSACTSASLEPSYVLRALGVEEDMAHTSIRFGIGRFTTEAEIDRAVELTV 427

Query: 108 RRGD**GH*AYSEAGGKVKRNEPAL*DGEGGIDIKQIQWAQH 149
           ++ +            K++   P     + GI+IK IQWAQH
Sbjct: 428 QQVE------------KLREMSPLYEMVKEGINIKDIQWAQH 457