Jatropha Genome Database

JcCB0279751.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0279751.10 - phase: 0 
         (237 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g02790.1                                                       216   2e-56
Glyma01g23150.1                                                        87   1e-17
Glyma09g08770.1                                                        87   1e-17
Glyma08g03930.1                                                        67   2e-11
Glyma01g34980.1                                                        59   4e-09
Glyma08g39270.1                                                        50   2e-06

>Glyma16g02790.1 
          Length = 396

 Score =  216 bits (549), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 118/201 (58%), Positives = 141/201 (70%), Gaps = 17/201 (8%)

Query: 1   MSLLARLSRQKXXXXXXXXXXXXARHLSSASTSSKLHDHYAFRPPPSLSPQE------PD 54
           M LL RL+RQ              RHLSSA+  SKLH +Y F+PP SL+PQ       P 
Sbjct: 1   MFLLTRLTRQNPSRATLL-----TRHLSSAA--SKLHSNYTFKPPSSLAPQPQCSNFPPS 53

Query: 55  NPNPTTRKKQKPLYRPPSTLDRTGKKPTHS-DLPFDFRYSYTESSQSVRPIGLREPKYSP 113
            PN   +KK KP YRPPS+LD+ G+KP  S DLPFDFR+SYTESS  VRPIGLREPKYSP
Sbjct: 54  KPN---QKKPKPRYRPPSSLDQAGRKPVRSNDLPFDFRFSYTESSAKVRPIGLREPKYSP 110

Query: 114 FGPDRLDRSWTGVCAPAVDPKVKSLDGTDDPNLEEKRKLMREKIQGDPLTNAERKILVAQ 173
           FGP R+DR WTGVCAPAVDP V+SL+G +DP LEE+RK  RE IQG PL++ ERK LV+Q
Sbjct: 111 FGPGRVDRKWTGVCAPAVDPTVESLEGPEDPKLEEQRKKKREMIQGKPLSSEERKALVSQ 170

Query: 174 CQRNKTKRQINLGMVFVLFNL 194
            +R+KT R +NLG   +  N+
Sbjct: 171 FERSKTNRHVNLGRDGLTHNM 191


>Glyma01g23150.1 
          Length = 358

 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/124 (45%), Positives = 73/124 (58%), Gaps = 14/124 (11%)

Query: 79  KKPTHSDLPFDFRYSYTESSQSVRPIGLRE-PKYSPFGPDRLDRSWTGVCAPAVDPKVKS 137
           K P  S+LPFDFRYSY+ES  SV PI  RE PK+SPFGP R+DR WTGV AP        
Sbjct: 69  KLPFKSNLPFDFRYSYSESDPSVGPISFRESPKFSPFGPGRIDRKWTGVSAP-------- 120

Query: 138 LDGTDDPNLEEKRKLMREKIQGDPLTNAERKILVAQCQRNKTKRQINLGMVFVLFNLSIL 197
           + G  D    E+ +  R +I G+PL+  E   L+ + + +   RQINLG   V  N+  L
Sbjct: 121 VQGEPD---RERVEEERNRILGEPLSEVEVAELIERYRHSDCARQINLGKGGVTHNM--L 175

Query: 198 GTVY 201
           G ++
Sbjct: 176 GDIH 179


>Glyma09g08770.1 
          Length = 358

 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/124 (45%), Positives = 73/124 (58%), Gaps = 14/124 (11%)

Query: 79  KKPTHSDLPFDFRYSYTESSQSVRPIGLRE-PKYSPFGPDRLDRSWTGVCAPAVDPKVKS 137
           K P  S+LPFDFRYSY+ES  SV PI  RE PK+SPFGP R+DR WTGV AP        
Sbjct: 69  KLPFKSNLPFDFRYSYSESDPSVGPISFRESPKFSPFGPGRIDRKWTGVSAP-------- 120

Query: 138 LDGTDDPNLEEKRKLMREKIQGDPLTNAERKILVAQCQRNKTKRQINLGMVFVLFNLSIL 197
           + G  D    E+ +  R +I G+PL+  E   L+ + + +   RQINLG   V  N+  L
Sbjct: 121 VQGEPD---RERVEEERNRILGEPLSEVEVAELIERYRHSDCARQINLGKGGVTHNM--L 175

Query: 198 GTVY 201
           G ++
Sbjct: 176 GDIH 179


>Glyma08g03930.1 
          Length = 595

 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 68/135 (50%), Gaps = 24/135 (17%)

Query: 87  PFDFRYSYTESSQSVRPIGLREPKYSPFGPDRLDRSWTGVC-APAVDPKVKSLDGTDDPN 145
           PF+F+YSYTE+ + V+PI +RE  + PFGPD + R WTG    PA   K+K  D    P 
Sbjct: 49  PFEFKYSYTETPK-VKPIKMREAPFVPFGPDTMPRPWTGRAPLPASKKKLKEFDSFVLPP 107

Query: 146 LEEKR------------------KLMREKIQGDPLTNAERKILVAQCQRNKTKRQINLGM 187
             +K                      RE+I G+PLT  E + LV  C   K +RQ+N+G 
Sbjct: 108 PHKKGVKPVQSPGPYLAGTGPRYVKSREEILGEPLTQEEIRDLVKSCM--KAQRQLNIGR 165

Query: 188 VFVLFNLSILGTVYA 202
             +  N+  L  ++A
Sbjct: 166 DGLTHNM--LDNIHA 178


>Glyma01g34980.1 
          Length = 691

 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 14/119 (11%)

Query: 87  PFDFRYSYTESSQSVRPIGLREPKYSPFGPDRLDRSWTGVC-APAVDPKVKSLDGTD--D 143
           PF+FR+SYTE+  + +P+ LREP ++PFGP  L R WTG    P     VK         
Sbjct: 140 PFEFRFSYTETPNA-KPVKLREPPFAPFGPASLPRPWTGRNPVPPSKTTVKDFHALALPP 198

Query: 144 PNLEEKRKL--------MREKIQGDPLTNAERKILVAQCQRNKTKRQINLGMVFVLFNL 194
           P+ EE + +         R+++ G+PLT  E   L+   +  K+ RQ+N+G   +  N+
Sbjct: 199 PDEEEVQPVRLAGPVWESRDEVLGEPLTKDEINRLIKATE--KSSRQLNIGRDGLTHNM 255


>Glyma08g39270.1 
          Length = 593

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 59/129 (45%), Gaps = 25/129 (19%)

Query: 87  PFDFRYSYTESSQSVRPIGLREPKYSPFGPDRLDRSWTGVCAPAVDPKVKSL-------- 138
           PF+F++SY+E+ ++ +PI +REP + PF P  + R WTG  AP    K K +        
Sbjct: 103 PFEFQFSYSETPKA-KPIAIREPAFLPFAPPTMPRPWTGK-APLKGKKSKKVPLFDSFNP 160

Query: 139 --DGTDDPNLEEK-----------RKLMREKIQGDPLTNAERKILVAQCQRNKTKRQINL 185
              GT    L E                RE+I G+PL   E  +LV         RQ+NL
Sbjct: 161 PPAGTKGVKLVEMPGPFPMGQFPLEGKSREEILGEPLKKWEIHMLVKPMM--SYNRQVNL 218

Query: 186 GMVFVLFNL 194
           G   +  N+
Sbjct: 219 GRDGLTHNM 227