Jatropha Genome Database

JcCB0273441.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0273441.10 + phase: 0 
         (212 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g26610.1                                                       276   9e-75
Glyma20g26600.1                                                       275   4e-74
Glyma10g40720.1                                                       254   3e-68
Glyma16g33970.1                                                       246   1e-65
Glyma16g33980.1                                                       199   2e-51
Glyma01g45510.1                                                       155   3e-38
Glyma20g26590.1                                                        61   7e-10
Glyma18g12760.1                                                        48   9e-06

>Glyma20g26610.1 
          Length = 225

 Score =  276 bits (707), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 120/199 (60%), Positives = 157/199 (78%)

Query: 11  HVIINSPRTSTGSVRYAQEIGIELSKQTLTNATDFIWTLLQLNKETERKGVQDISLIIED 70
           + + N+  ++ G V +  +IG E +K+TL +AT FIW + Q N  ++RK VQ +SL ++D
Sbjct: 23  YTVTNNALSTPGGVAFRDKIGAEYAKRTLDSATQFIWRIFQQNNPSDRKNVQKVSLFVDD 82

Query: 71  MEGVAYTDDNEIHFSTKYVANYSEDLKSEVIGILYHEMTHIWQWNGNGKTPGGLIEGIAD 130
           M+GVAYT +N+IH S +YV N   D+K+E+ G+LYHEM H+WQW+GNG+ PGGLIEGIAD
Sbjct: 83  MDGVAYTSNNQIHLSARYVGNNKGDVKTEITGVLYHEMVHVWQWSGNGRAPGGLIEGIAD 142

Query: 131 LVRLKANYAPSHWVQPGQGERWDQGYDVTARFLDYCNDLRDGFVADLNKKMRSDYKVEYF 190
            VRLKANYAPSHWV+ GQG++WDQGYDVTARFLDYC+ L+ GFVA LNK MR+ Y  +YF
Sbjct: 143 YVRLKANYAPSHWVKAGQGQKWDQGYDVTARFLDYCDSLKSGFVAQLNKLMRTGYSDQYF 202

Query: 191 VELLGKPVHQLWNEYKAKH 209
           V+LLGKPV QLW +YKAK+
Sbjct: 203 VQLLGKPVDQLWRDYKAKY 221


>Glyma20g26600.1 
          Length = 225

 Score =  275 bits (702), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 121/199 (60%), Positives = 157/199 (78%)

Query: 11  HVIINSPRTSTGSVRYAQEIGIELSKQTLTNATDFIWTLLQLNKETERKGVQDISLIIED 70
           + + N+  +++G VR+   IG + +KQTL +AT FIW +LQ N   +RK VQ ++L ++D
Sbjct: 24  YTVTNNALSTSGGVRFRDAIGDDYAKQTLDSATQFIWGVLQQNAPADRKDVQKVNLFVDD 83

Query: 71  MEGVAYTDDNEIHFSTKYVANYSEDLKSEVIGILYHEMTHIWQWNGNGKTPGGLIEGIAD 130
           M+GVAYT ++EIH S +YV +YS DLK+E+ G+LYHEM H+WQWNGNG+TP GLIEGIAD
Sbjct: 84  MDGVAYTSNDEIHLSARYVNDYSGDLKTEITGVLYHEMVHVWQWNGNGQTPSGLIEGIAD 143

Query: 131 LVRLKANYAPSHWVQPGQGERWDQGYDVTARFLDYCNDLRDGFVADLNKKMRSDYKVEYF 190
            VRLKANYAPSHWV+ GQGE+WDQGYDVTA FLDYC+ L+ GFVA LN++MR  Y  + F
Sbjct: 144 YVRLKANYAPSHWVKAGQGEKWDQGYDVTAHFLDYCDSLKSGFVAQLNQQMRDGYSDQLF 203

Query: 191 VELLGKPVHQLWNEYKAKH 209
           V+LLGK V QLW +YKAK+
Sbjct: 204 VQLLGKTVDQLWQDYKAKY 222


>Glyma10g40720.1 
          Length = 230

 Score =  254 bits (650), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 117/201 (58%), Positives = 149/201 (74%), Gaps = 4/201 (1%)

Query: 13  IINSPRTSTGSVRYAQEIGIELSKQTLTNATDFIWTLLQLNKETERKGVQDISLIIEDM- 71
           + N+  ++ G VR+   IG E +KQTL +AT FIW + Q N   +RK +Q I+L +ED  
Sbjct: 26  VTNNALSTPGGVRFRDAIGDEYAKQTLDSATQFIWGVFQQNAPADRKDIQKINLFVEDRV 85

Query: 72  ---EGVAYTDDNEIHFSTKYVANYSEDLKSEVIGILYHEMTHIWQWNGNGKTPGGLIEGI 128
                VAYT  +EIH   KYV +Y  D+K+E+ G+LYHEM H+WQWNGNG+ P GLIEGI
Sbjct: 86  VPNGVVAYTSKDEIHVIAKYVNDYGGDVKTEITGVLYHEMVHVWQWNGNGQAPSGLIEGI 145

Query: 129 ADLVRLKANYAPSHWVQPGQGERWDQGYDVTARFLDYCNDLRDGFVADLNKKMRSDYKVE 188
           AD VRLKANYAPSHW + G+G++WDQGYDVTARFLDYCN L+ GFVA LNK+MR+ Y  +
Sbjct: 146 ADYVRLKANYAPSHWKKAGEGQKWDQGYDVTARFLDYCNTLKSGFVAQLNKQMRTGYSDQ 205

Query: 189 YFVELLGKPVHQLWNEYKAKH 209
           +FV+LLGK V QLW +YKAK+
Sbjct: 206 FFVQLLGKTVDQLWQDYKAKY 226


>Glyma16g33970.1 
          Length = 207

 Score =  246 bits (628), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 108/199 (54%), Positives = 147/199 (73%), Gaps = 1/199 (0%)

Query: 12  VIINSPRTSTGSVRYAQEIGIELSKQTLTNATDFIWTLLQLNKETERKGVQDISLIIEDM 71
            +IN+  T+ G VR+  +IG E + QTL +AT FIW + Q N  ++RK VQ +SL ++DM
Sbjct: 5   TVINNALTTLGGVRFRDKIGAEYANQTLDSATQFIWEIFQQNNPSDRKSVQKVSLFVDDM 64

Query: 72  EGVAYTDDNEIHFSTKYVANYSE-DLKSEVIGILYHEMTHIWQWNGNGKTPGGLIEGIAD 130
           +G+AYT  NEIH S +YV  YS  D+K E+ G+L+H++ ++WQW GNGK PGGL  GIAD
Sbjct: 65  DGIAYTRKNEIHVSARYVNGYSGGDVKREITGVLFHQVCYVWQWKGNGKAPGGLTGGIAD 124

Query: 131 LVRLKANYAPSHWVQPGQGERWDQGYDVTARFLDYCNDLRDGFVADLNKKMRSDYKVEYF 190
            VRLKANYA SHW +PGQG++W++GY++TA FLDYC+ L+ GFV  LN+ MR+DY  E+F
Sbjct: 125 FVRLKANYAASHWRKPGQGQKWNEGYEITAHFLDYCDSLKSGFVGQLNQWMRTDYSDEFF 184

Query: 191 VELLGKPVHQLWNEYKAKH 209
             LL KPV+ LW +YKA +
Sbjct: 185 FLLLAKPVNHLWRDYKAMY 203


>Glyma16g33980.1 
          Length = 811

 Score =  199 bits (505), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 89/188 (47%), Positives = 124/188 (65%), Gaps = 26/188 (13%)

Query: 13  IINSPRTSTGSVRYAQEIGIELSKQTLTNATDFIWTLLQLNKETERKGVQDISLIIEDME 72
           +IN+  T+ G VR+  +IG E + +TL  AT F+W + Q    ++RK VQ +SL+++DME
Sbjct: 579 VINNALTTPGGVRFRDKIGAEYANRTLELATQFVWRIFQQKNPSDRKNVQKVSLVVDDME 638

Query: 73  GVAYTDDNEIHFSTKYVANYSEDLKSEVIGILYHEMTHIWQWNGNGKTPGGLIEGIADLV 132
                                     E+ G+L+H++ ++WQW GNG+ PGGLI GIAD V
Sbjct: 639 --------------------------EITGVLFHQVCYVWQWYGNGEAPGGLIGGIADFV 672

Query: 133 RLKANYAPSHWVQPGQGERWDQGYDVTARFLDYCNDLRDGFVADLNKKMRSDYKVEYFVE 192
           RLKANYA SHW +PGQG+RWD+GYD+TA FLDYC+ L+ GFVA LN+ MR+ Y  ++FV+
Sbjct: 673 RLKANYAASHWRKPGQGQRWDEGYDITAHFLDYCDSLKSGFVAQLNQLMRTGYSDQFFVQ 732

Query: 193 LLGKPVHQ 200
           LLGKP  +
Sbjct: 733 LLGKPFKE 740


>Glyma01g45510.1 
          Length = 173

 Score =  155 bits (392), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 109/179 (60%), Gaps = 26/179 (14%)

Query: 11  HVIINSPRTSTGSVRYAQEIGIELSKQTLTNATDFIWTLLQLNKETERKGVQDISLIIED 70
           +V+ N+  +STG   + +++G + +KQTL +A DF   L   +   +RK VQ ++LI+E+
Sbjct: 12  YVLSNNAGSSTGGKMFEKQVGADYAKQTLDSAADFTLKLFHQSTVADRKNVQQVNLIVEN 71

Query: 71  MEG--------VAYTDDNEIHFSTKYVANYSEDLKSEVIGILYHEMTHIWQWNGNGKTPG 122
           M+G        +AY  ++EIH S+ ++  +  D                  W+GNG+   
Sbjct: 72  MDGLHLYVSQQIAYCSNDEIHESSSFIERFPRD------------------WDGNGQALS 113

Query: 123 GLIEGIADLVRLKANYAPSHWVQPGQGERWDQGYDVTARFLDYCNDLRDGFVADLNKKM 181
           GLIEGIAD VRLKA YA  +W QPG G  W+QGYDVTARFLDYCN +++GFVADLN  M
Sbjct: 114 GLIEGIADYVRLKAGYAADYWGQPGHGGDWNQGYDVTARFLDYCNGIKNGFVADLNSMM 172


>Glyma20g26590.1 
          Length = 54

 Score = 61.2 bits (147), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 26/41 (63%), Positives = 33/41 (80%)

Query: 162 FLDYCNDLRDGFVADLNKKMRSDYKVEYFVELLGKPVHQLW 202
           FLDYC+ L++GFVA LNK+MR+ Y  + FV+LLGK V QLW
Sbjct: 2   FLDYCDGLKNGFVAQLNKQMRTGYSDQLFVQLLGKTVDQLW 42


>Glyma18g12760.1 
          Length = 257

 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 67/168 (39%), Gaps = 29/168 (17%)

Query: 25  RYAQEIGIELSKQTLTNATDFIWTLLQLNKETERKGVQDISLIIEDMEGVAYTDDNEIHF 84
           ++   + ++L ++ L N TD +          +R G +  S +IE               
Sbjct: 99  KHIDSVTLQLPRRNL-NVTDIVAVYTAAGNHLQRGGGKCFSYVIE--------------I 143

Query: 85  STKYVANYSEDLKSEVIGILYHEMTHIWQWNGNGKTPGGLIEGIADLVRLKANY------ 138
           S   + +   D K  ++G +   M  +W W G    P GL++G+A+ V   A +      
Sbjct: 144 SPTLLEDQRYD-KIAIVGAILRGMAKVWIWEG---APQGLVDGMAEYVAEMAGFRRGMVS 199

Query: 139 --APSHWVQPGQGERW--DQGYDVTARFLDYCNDLRDGFVADLNKKMR 182
                   + G G  W  D+     AR L YC   + GF+  LN+ MR
Sbjct: 200 GGGEMPQCREGGGGWWWEDKDPSHVARLLHYCEKFKKGFIQRLNEAMR 247