Jatropha Genome Database

JcCB0270661.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0270661.10 + phase: 0 /partial
         (191 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g10540.1                                                       278   2e-75
Glyma08g03210.1                                                       160   5e-40
Glyma08g03210.2                                                       154   4e-38
Glyma05g36370.1                                                       136   1e-32
Glyma19g33620.1                                                        84   9e-17
Glyma03g30770.1                                                        82   2e-16
Glyma04g27320.1                                                        66   2e-11

>Glyma06g10540.1 
          Length = 685

 Score =  278 bits (712), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 133/191 (69%), Positives = 152/191 (79%), Gaps = 9/191 (4%)

Query: 1   GDSAMKGTFATRVSGSADLYRVNKRKPYHSVNFIIAHDGFTLYDLVSYNFKHXXXXXXXX 60
           GDS +KG+FATRV+GS+DLY VN R+PYH +NF+IAHDGFTL DLVSYNFKH        
Sbjct: 431 GDSGVKGSFATRVAGSSDLYSVNNRRPYHGINFVIAHDGFTLRDLVSYNFKHNEANGEGG 490

Query: 61  XXXXXXXYSWNCGFEGETDDPTIKALRSRQMKNFHLALMISQGTPMMLMGDEYGHTRYGN 120
                  +SWNCG EGETDD +++ALRSRQMKNFHLALMISQGTPMMLMGDEYGHTR GN
Sbjct: 491 NDGSNDNFSWNCGLEGETDDASVRALRSRQMKNFHLALMISQGTPMMLMGDEYGHTRNGN 550

Query: 121 NNSYGHDTSINNFQWGLLDAQRSGHFRFFSEVIKFRGTHQVFRHENFLSNNDVTWHEDNW 180
           NNSYGHDT+INNF           HFRFFS +IK+R  H+VF HE+FLS ND+TWHEDNW
Sbjct: 551 NNSYGHDTAINNF---------FDHFRFFSNMIKYRHAHEVFNHESFLSKNDITWHEDNW 601

Query: 181 DNYESKFLAFT 191
           DN++SKFLAFT
Sbjct: 602 DNHDSKFLAFT 612


>Glyma08g03210.1 
          Length = 756

 Score =  160 bits (406), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 86/196 (43%), Positives = 113/196 (57%), Gaps = 6/196 (3%)

Query: 1   GDSAMKGTFATRVSGSADLYRVNKRKPYHSVNFIIAHDGFTLYDLVSYNFKHXXXXXXXX 60
           G     G FA  + GS +LY+   RKP+HS+NF+ AHDGFTL DLV+YN K+        
Sbjct: 474 GTDGFAGAFAECLCGSPNLYQGGGRKPWHSINFVCAHDGFTLADLVTYNNKNNLSNGEDN 533

Query: 61  XXXXXXXYSWNCGFEGETDDPTIKALRSRQMKNFHLALMISQGTPMMLMGDEYGHTRYGN 120
                   SWNCG EGE    ++K LR RQM+NF L+LM+SQG PM+ MGDEYGHT+ GN
Sbjct: 534 NDGENHNNSWNCGQEGEFVSTSVKKLRKRQMRNFFLSLMVSQGVPMIYMGDEYGHTKGGN 593

Query: 121 NNSYGHDTSINNFQWGLLDAQRSGHFRFFSEVIKFRGTHQVFRHENFLSNNDVTWH---- 176
           NN+Y HD   N FQW   +   S  FRF   + KFR   +     +F ++  + WH    
Sbjct: 594 NNTYCHDNYHNYFQWDKKEESSSDFFRFCRLMTKFRQECESLGLADFPTSERLQWHGHFP 653

Query: 177 -EDNWDNYESKFLAFT 191
            + +W    S+F+A T
Sbjct: 654 GKPDWSE-TSRFVACT 668


>Glyma08g03210.2 
          Length = 630

 Score =  154 bits (390), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 78/156 (50%), Positives = 96/156 (61%)

Query: 1   GDSAMKGTFATRVSGSADLYRVNKRKPYHSVNFIIAHDGFTLYDLVSYNFKHXXXXXXXX 60
           G     G FA  + GS +LY+   RKP+HS+NF+ AHDGFTL DLV+YN K+        
Sbjct: 474 GTDGFAGAFAECLCGSPNLYQGGGRKPWHSINFVCAHDGFTLADLVTYNNKNNLSNGEDN 533

Query: 61  XXXXXXXYSWNCGFEGETDDPTIKALRSRQMKNFHLALMISQGTPMMLMGDEYGHTRYGN 120
                   SWNCG EGE    ++K LR RQM+NF L+LM+SQG PM+ MGDEYGHT+ GN
Sbjct: 534 NDGENHNNSWNCGQEGEFVSTSVKKLRKRQMRNFFLSLMVSQGVPMIYMGDEYGHTKGGN 593

Query: 121 NNSYGHDTSINNFQWGLLDAQRSGHFRFFSEVIKFR 156
           NN+Y HD   N FQW   +   S  FRF   + KFR
Sbjct: 594 NNTYCHDNYHNYFQWDKKEESSSDFFRFCRLMTKFR 629


>Glyma05g36370.1 
          Length = 399

 Score =  136 bits (343), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 68/131 (51%), Positives = 84/131 (64%)

Query: 25  RKPYHSVNFIIAHDGFTLYDLVSYNFKHXXXXXXXXXXXXXXXYSWNCGFEGETDDPTIK 84
           RKP+HS+NFI AHDGFTL DLV+YN K+                SWNCG EGE    ++K
Sbjct: 138 RKPWHSINFICAHDGFTLADLVTYNNKNNLSNGEDNNDGENHNNSWNCGQEGEFVSTSVK 197

Query: 85  ALRSRQMKNFHLALMISQGTPMMLMGDEYGHTRYGNNNSYGHDTSINNFQWGLLDAQRSG 144
            LR  QM+NF L+LM+SQG PM+ MGDEYGHT+ GNNN+Y HD  +N F+W   +   S 
Sbjct: 198 KLRKPQMRNFFLSLMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNYLNYFRWDKKEESSSD 257

Query: 145 HFRFFSEVIKF 155
            FRF   + KF
Sbjct: 258 FFRFCRLMTKF 268


>Glyma19g33620.1 
          Length = 671

 Score = 84.0 bits (206), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 28/189 (14%)

Query: 9   FATRVSGSADLYRVNKRKPYHSVNFIIAHDGFTLYDLVSYNFKHXXXXXXXXXXXXXXXY 68
            ATR+ GS D++    R P  S N+I  + G +L DLVS++                   
Sbjct: 408 LATRLCGSGDIFS-GGRGPGFSFNYIARNFGVSLVDLVSFS--------------SVDEL 452

Query: 69  SWNCGFEGETDDPTIKALRSRQMKNFHLALMISQGTPMMLMGDEYGHTRYGNNNSYGHDT 128
           SWNCG EG T++  +   R +Q++NF   L +S G P++ MGDE G +  G     G   
Sbjct: 453 SWNCGAEGPTNNTAVLERRLKQIRNFLFILFVSLGVPVLNMGDECGQSSGGFTAYDG--- 509

Query: 129 SINNFQWGLLD---AQRSGHFRFFSEVIKFRGTHQVFRHENFLSNNDVTWH-----EDNW 180
            I  F W  L     +++  F FF   ++ R ++ + +  +FL   ++ W+        W
Sbjct: 510 -IKPFSWSALKTGFGKQTSEFIFFLSSLRKRRSY-LLQRRSFLKEENIEWYGSDGDPPRW 567

Query: 181 DNYESKFLA 189
           ++   KFLA
Sbjct: 568 EDPSCKFLA 576


>Glyma03g30770.1 
          Length = 598

 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 86/191 (45%), Gaps = 28/191 (14%)

Query: 9   FATRVSGSADLYRVNKRKPYHSVNFIIAHDGFTLYDLVSYNFKHXXXXXXXXXXXXXXXY 68
            ATR+ GS D++    R P  S N+I  + G +L DLVS++                   
Sbjct: 349 LATRLCGSGDIFS-GGRGPAFSFNYIARNFGVSLVDLVSFS--------------STDEL 393

Query: 69  SWNCGFEGETDDPTIKALRSRQMKNFHLALMISQGTPMMLMGDEYGHTRYGNNNSYGHDT 128
           SWNCG EG T++  I   R +Q++NF   L +S G P++ MGDE G +  G     G   
Sbjct: 394 SWNCGEEGPTNNTAILERRLKQIRNFLFILFVSLGVPVLNMGDECGQSSGGFTAYDG--- 450

Query: 129 SINNFQWGLLD---AQRSGHFRFFSEVIKFRGTHQVFRHENFLSNNDVTWH-----EDNW 180
            I  F W  L     +++  F FF    + R    + +  +FL   ++ W+        W
Sbjct: 451 -IKPFSWSSLKTGFGKQTSQFIFFLSSFR-RRRSDLLQRMSFLKEENIEWYGSDGAPPRW 508

Query: 181 DNYESKFLAFT 191
           ++   KFLA  
Sbjct: 509 EDLSCKFLAMA 519


>Glyma04g27320.1 
          Length = 51

 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 34/50 (68%)

Query: 26 KPYHSVNFIIAHDGFTLYDLVSYNFKHXXXXXXXXXXXXXXXYSWNCGFE 75
          +PYHS+NF+IAHDGFTL DLVSYNFKH               +SWNCGF+
Sbjct: 1  RPYHSINFVIAHDGFTLRDLVSYNFKHNEANGEGGNDGSNDNFSWNCGFK 50