Jatropha Genome Database

JcCB0269831.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0269831.10 - phase: 0 
         (178 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g41450.1                                                       128   4e-30
Glyma18g14750.1                                                       125   2e-29
Glyma03g18990.1                                                        71   6e-13
Glyma16g13570.1                                                        70   1e-12

>Glyma08g41450.1 
          Length = 324

 Score =  128 bits (321), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 74/119 (62%), Positives = 78/119 (65%), Gaps = 2/119 (1%)

Query: 33  GMESDEEIRRVPEISGEPAGTSASGRDASSVAGLDRVQAPGEGQSQRKRGRSPADKEXXX 92
           G ESDEEIRRVPEI GE AGTSAS  DA S AG +RVQ  GEGQ  +KRGRSPADKE   
Sbjct: 192 GPESDEEIRRVPEIGGESAGTSASQPDAGSNAGTERVQGTGEGQ--KKRGRSPADKESKR 249

Query: 93  XXXXXXXXVSAQQARERKKAYLNELETRVXXXXXXXXXXXXXXSTLQNENQMLRHVCHN 151
                   VSAQQARERKKAYL +LETRV              STLQNENQMLR +  N
Sbjct: 250 LKRLLRNRVSAQQARERKKAYLIDLETRVKDLEKKNSELKERLSTLQNENQMLRQILKN 308


>Glyma18g14750.1 
          Length = 326

 Score =  125 bits (314), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/119 (62%), Positives = 77/119 (64%), Gaps = 2/119 (1%)

Query: 33  GMESDEEIRRVPEISGEPAGTSASGRDASSVAGLDRVQAPGEGQSQRKRGRSPADKEXXX 92
           G ESDEEIRRVPEI GE AGTSAS  DA S AG +R Q  G G SQ+KRGRSPADKE   
Sbjct: 194 GPESDEEIRRVPEIGGESAGTSASRPDAGSNAGTERAQ--GTGDSQKKRGRSPADKESKR 251

Query: 93  XXXXXXXXVSAQQARERKKAYLNELETRVXXXXXXXXXXXXXXSTLQNENQMLRHVCHN 151
                   VSAQQARERKKAYL +LETRV              STLQNENQMLR V  N
Sbjct: 252 LKRLLRNRVSAQQARERKKAYLIDLETRVKDLEKKNSELKERLSTLQNENQMLRQVLKN 310


>Glyma03g18990.1 
          Length = 191

 Score = 70.9 bits (172), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 62/121 (51%), Gaps = 5/121 (4%)

Query: 35  ESDEEIRRVPEISGEPAGTSASGRDASSVAGLDRVQAPGEGQS----QRKRGRSPADKEX 90
           +SDE++  VP++   P    ++    +S      V  P + QS    +R+RGR+PADKE 
Sbjct: 53  DSDEDMFTVPDVEATPINVHSAVTLQNSNLNQRNVTDP-QFQSGFPGKRRRGRNPADKEH 111

Query: 91  XXXXXXXXXXVSAQQARERKKAYLNELETRVXXXXXXXXXXXXXXSTLQNENQMLRHVCH 150
                     VSAQQARERKK Y+N+LE+R               STL NEN MLR V  
Sbjct: 112 RRLKRLLRNRVSAQQARERKKVYVNDLESRAKEMQDKNAILEERISTLINENTMLRKVLM 171

Query: 151 N 151
           N
Sbjct: 172 N 172


>Glyma16g13570.1 
          Length = 191

 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 62/121 (51%), Gaps = 5/121 (4%)

Query: 35  ESDEEIRRVPEISGEPAGTSASGRDASSVAGLDRVQAPGEGQS----QRKRGRSPADKEX 90
           +SDE++  VP++   P    ++    +S      V  P + Q+    +R+RGR+PADKE 
Sbjct: 53  DSDEDMFTVPDVETTPVSVHSAATLQNSNLTQRNVTDP-QFQTGFPGKRRRGRNPADKEH 111

Query: 91  XXXXXXXXXXVSAQQARERKKAYLNELETRVXXXXXXXXXXXXXXSTLQNENQMLRHVCH 150
                     VSAQQARERKK Y+N+LE+R               STL NEN MLR V  
Sbjct: 112 RRLKRLLRNRVSAQQARERKKVYVNDLESRAKELQDKNAILEERISTLINENTMLRKVLM 171

Query: 151 N 151
           N
Sbjct: 172 N 172